GR392708
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR392708 vs. SwissProt
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 7.166e-95 Identity = 166/193 (86.01%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. SwissProt
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 4.347e-92 Identity = 163/193 (84.46%), Postives = 178/193 (92.23%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRP+VHGQT KYNMKVR GKGF+LEELK+AGIPKKLAPTIGIAVDHRR+NRSLE LQ+NVQRLKTYKAKLV+FPRRA KVKAGDST EELANATQV G Y+P VREK + ELVK+T EMK+ KA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. SwissProt
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 5.678e-92 Identity = 162/193 (83.94%), Postives = 178/193 (92.23%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGI++DHRR+NRSLE LQ+NVQRLKTYKAKLV+FPRRA KVKAGDST EELANATQV G Y+P VREK ++ELVK+T EMK+ AY K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. SwissProt
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 9.065e-90 Identity = 158/193 (81.87%), Postives = 176/193 (91.19%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIP+ HFRKHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELK AGIPKKLAPTIGI+VDHRR+NRSLE LQ+NVQRLKTYKAKLVVFPRR+ +VKAGDSTPEELANATQV G Y+P K ++ELVK+T ++KAFKAY K+RLERTN RH GAR Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGAR 193
BLAST of GR392708 vs. SwissProt
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.221e-79 Identity = 143/193 (74.09%), Postives = 161/193 (83.42%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+K W+NYVKT FNQPA KTRRR+ARQ KAVKIFPRPTAGP+RP+VH QT YNMKVR GKGF+LEELKAAGIPKKLAPTIGI+VDH R+NRSLE Q NVQRLKTYKAKLV+FPR A VK GDS +ELANATQV ++P VRE P++ELVK+T +MK F AY K+RLE NKRH G R Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVR 193
BLAST of GR392708 vs. SwissProt
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.315e-72 Identity = 135/186 (72.58%), Postives = 152/186 (81.72%), Query Frame = 2 Query: 71 NEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 N HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKI PRPTAG LRPIVHGQT KYNMKVR G+GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLE LQ NVQRL+ + +LVVFPRRA + + P ATQV G+Y+P REK + L K+ +MK+F AY KLR+ERTN+RH GAR+ Sbjct: 5 NGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKISPRPTAGTLRPIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKLRVERTNERHIGARM 190
BLAST of GR392708 vs. SwissProt
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.969e-61 Identity = 119/194 (61.34%), Postives = 143/194 (73.71%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 MV+ N+++PN HF K WQ +VKTWFNQPARK RRR AR +KA FPRP AG L+PIV QT KYN K R G+GF+LEELK AGIP K APT+GIAVDHRR+NRSLE+LQANVQRLKTY+A LV+FPR K KA +++ + + A+Q G LP KP++ELVKIT +MK Y KLR+ER N R G R Sbjct: 1 MVRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNARAEKAKATFPRPVAGSLKPIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKLRIERVNARLKGMR 194
BLAST of GR392708 vs. SwissProt
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 3.477e-57 Identity = 113/190 (59.47%), Postives = 138/190 (72.63%), Query Frame = 2 Query: 56 NNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 N +I N HF K WQ V+TWFNQPARK RRR ARQ KA +I PRP +GPLRP+V T +Y+ KVR G+GF+LEELKAAGI KK+A TIGI+VD RRRNRS ESLQANVQRLK Y+ KL++FPR+A K K GDST EEL ATQ+TG +P + + I+++ K FKA+ LR+ R N R +G R Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIR 195
BLAST of GR392708 vs. SwissProt
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3) HSP 1 Score: 216.853 bits (551), Expect = 1.118e-55 Identity = 112/190 (58.95%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 56 NNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 N +I N HF K WQ V+TWFNQPARK RRR ARQ KA +I PRP AGPLRPIV T +YN KVR G+GF+LEELKAAGI K++A TIGIAVD RRRNRS ESL NVQRLK Y++KL++FPR+ K GDST EE+ ATQ+TG +P + IT+E K F A+ LR+ R N R +G R Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLFGIR 195
BLAST of GR392708 vs. SwissProt
Match: RL13_RAT (60S ribosomal protein L13 OS=Rattus norvegicus GN=Rpl13 PE=1 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 6.137e-54 Identity = 109/190 (57.37%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 56 NNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 N +I HF K WQ V TWFNQPARK RRR ARQ KA +I PRP +GP+RPIV T +Y+ KVR G+GFSLEEL+ AGI KK+A TIGI+VD RRRN+S ESLQANVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+TG +P + IT+E K FKA+ LR+ R N R +G R Sbjct: 6 NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARAITEEEKNFKAFASLRMARANARLFGIR 195
BLAST of GR392708 vs. TrEMBL
Match: B7FGS0_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 1.432e-101 Identity = 183/195 (93.85%), Postives = 188/195 (96.41%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMK+R GKGFSLEELKAAGIPKKLAPTIGI+VDHRR+NRSLE LQANVQRLKTYKAKLVVFPRRA K KAGDSTPEELANATQV GSYLP VREKP+VELVK+TDEMKAFKAYYKLRLERTNKRH GARL Sbjct: 1 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLGARL 195
BLAST of GR392708 vs. TrEMBL
Match: B7FGV8_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.584e-100 Identity = 182/195 (93.33%), Postives = 187/195 (95.90%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMK+R GKGFSLEELKAAGIPKKLAPTIGI+VDHRR+NRSLE LQANVQRLKT KAKLVVFPRRA K KAGDSTPEELANATQV GSYLP VREKP+VELVK+TDEMKAFKAYYKLRLERTNKRH GARL Sbjct: 1 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTCKAKLVVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLGARL 195
BLAST of GR392708 vs. TrEMBL
Match: B7FMY6_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 2.287e-99 Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNVIPNEHFRKH QNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMK+R GKGFSLEELK AGIPKKLAPTIGI+VDHRR+NRSLE LQANVQRLKTYKAKL+VFPRRA K KAGDSTPEELANATQV GSYLP VREKP+VELVK+TDEMKAFKAYYKLRLERTNKRH GARL Sbjct: 1 MVKHNNVIPNEHFRKHSQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTYKAKLIVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLGARL 195
BLAST of GR392708 vs. TrEMBL
Match: C6SYZ4_SOYBN (60S ribosomal protein L13 OS=Glycine max PE=2 SV=1) HSP 1 Score: 362.844 bits (930), Expect = 1.936e-98 Identity = 178/195 (91.28%), Postives = 187/195 (95.90%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNVIPN HFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAG LRPIVHGQT KYNMKVR G+GFSLEELKAAGIPKKLAPTIGI+VDHRR+NRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDS+ EELANATQV G +LP VREKP+V+LVK+TDEMKAFKAYYKLRLERTNKRH+GARL Sbjct: 1 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSSLEELANATQVQGPFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHHGARL 195
BLAST of GR392708 vs. TrEMBL
Match: C6TL61_SOYBN (60S ribosomal protein L13 OS=Glycine max PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 6.227e-97 Identity = 176/195 (90.26%), Postives = 185/195 (94.87%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNVIPN HFRKHWQNYVKTWFNQPARKT RRLARQKKAVKIFPRPTAG LRPIVHGQT KYNMKVR G+GFSLEELKAAGIPKKLAPTIGI+VDHRR+NRSLESLQANVQRLKTYKAKLVV PRRAHKVKAGDS+ EELANATQV G +LP VREKP+V+LVK+TDEMKAFKAYYKLRLERTNKRH+GARL Sbjct: 1 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTGRRLARQKKAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYKAKLVVLPRRAHKVKAGDSSLEELANATQVQGPFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHHGARL 195
BLAST of GR392708 vs. TrEMBL
Match: D7LS33_ARALY (ATBBC1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_347994 PE=4 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 3.778e-94 Identity = 167/193 (86.53%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKAY K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAYDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. TrEMBL
Match: B9DGA4_ARATH (60S ribosomal protein L13 OS=Arabidopsis thaliana GN=At3g49010 PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 1.099e-93 Identity = 166/193 (86.01%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. TrEMBL
Match: B9STE6_RICCO (60S ribosomal protein L13 OS=Ricinus communis GN=RCOM_1318700 PE=3 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 1.875e-93 Identity = 167/195 (85.64%), Postives = 181/195 (92.82%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRPIVHGQT KYNMK+R G+GF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQANVQRLKTYKAKLVVFPRRA K KAGDS PEELA ATQV G Y+P VREKPSVELVK+T+EMK+FKAY KLR+ER N+RH GAR+ Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDKLRVERMNQRHLGARM 195
BLAST of GR392708 vs. TrEMBL
Match: B9MUD1_POPTR (60S ribosomal protein L13 OS=Populus trichocarpa GN=POPTRDRAFT_917214 PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 3.198e-93 Identity = 168/195 (86.15%), Postives = 178/195 (91.28%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRPIVHGQT KYNMKVR G+GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLE LQ NVQRLKTYKAKLVVFPRRA K KAGDS PEELA ATQV G ++P VREKPSVELVK+T+EMK+F+AY KLR ERTN RH G RL Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKAKLVVFPRRARKSKAGDSAPEELATATQVQGHFMPIVREKPSVELVKVTEEMKSFRAYDKLRAERTNARHVGVRL 195
BLAST of GR392708 vs. TrEMBL
Match: A5CB91_VITVI (60S ribosomal protein L13 OS=Vitis vinifera GN=VITISV_018882 PE=3 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 7.125e-93 Identity = 167/195 (85.64%), Postives = 180/195 (92.31%), Query Frame = 2 Query: 44 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGARL 628 MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRPIVHGQT KYNMKVR G+GFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRR K KAGDS+ EELA ATQV G Y+P VREKP+VELVK+TDEMK+FKAY KLR+ER N+RH G R+ Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGKLRVERMNQRHVGVRM 195
BLAST of GR392708 vs. TAIR peptide
Match: AT3G49010.3 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206) HSP 1 Score: 347.051 bits (889), Expect = 7.026e-96 Identity = 166/193 (86.01%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. TAIR peptide
Match: AT3G49010.2 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206) HSP 1 Score: 347.051 bits (889), Expect = 7.026e-96 Identity = 166/193 (86.01%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. TAIR peptide
Match: AT3G49010.1 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206) HSP 1 Score: 347.051 bits (889), Expect = 7.026e-96 Identity = 166/193 (86.01%), Postives = 180/193 (93.26%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KVKAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of GR392708 vs. TAIR peptide
Match: AT3G49010.4 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=204) HSP 1 Score: 338.576 bits (867), Expect = 2.499e-93 Identity = 164/193 (84.97%), Postives = 178/193 (92.23%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELKAAGIPKKLAPTIGIAVDHRR+NRSLE LQ NVQRLKTYK KLV+FPRRA KAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 191
BLAST of GR392708 vs. TAIR peptide
Match: AT5G23900.1 (| Symbols: | Ribosomal protein L13e family protein | chr5:8064176-8065081 REVERSE LENGTH=206) HSP 1 Score: 330.102 bits (845), Expect = 8.887e-91 Identity = 158/193 (81.87%), Postives = 176/193 (91.19%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIP+ HFRKHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LEELK AGIPKKLAPTIGI+VDHRR+NRSLE LQ+NVQRLKTYKAKLVVFPRR+ +VKAGDSTPEELANATQV G Y+P K ++ELVK+T ++KAFKAY K+RLERTN RH GAR Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGAR 193
BLAST of GR392708 vs. TAIR peptide
Match: AT3G48960.1 (| Symbols: | Ribosomal protein L13e family protein | chr3:18150444-18151412 REVERSE LENGTH=206) HSP 1 Score: 294.664 bits (753), Expect = 4.138e-80 Identity = 143/193 (74.09%), Postives = 161/193 (83.42%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+K W+NYVKT FNQPA KTRRR+ARQ KAVKIFPRPTAGP+RP+VH QT YNMKVR GKGF+LEELKAAGIPKKLAPTIGI+VDH R+NRSLE Q NVQRLKTYKAKLV+FPR A VK GDS +ELANATQV ++P VRE P++ELVK+T +MK F AY K+RLE NKRH G R Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVR 193
BLAST of GR392708 vs. TAIR peptide
Match: AT3G49010.5 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=153) HSP 1 Score: 227.639 bits (579), Expect = 6.212e-60 Identity = 117/193 (60.62%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 47 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKVRDGKGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSTPEELANATQVTGSYLPTVREKPSVELVKITDEMKAFKAYYKLRLERTNKRHYGAR 625 +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMKVR GKGF+LE ++KAGDSTPEELANATQV G YLP VREKP++ELVK+T EMK+FKA+ K+RLERTNKRH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLE-----------------------------------------------------ELKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 140 The following BLAST results are available for this feature:
BLAST of GR392708 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR392708 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR392708 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR392708 ID=GR392708; Name=GR392708; organism=Cicer arietinum; type=EST; length=811bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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