GR393664

EST Overview
NameGR393664
Unique NameGR393664
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length286
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR393664 vs. TrEMBL
Match: C6TED9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.010e-21
Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 2
Query:    2 PHYDTNSSSNYNGKKT-VWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRILPSKHLL 271
            PHY + S S+ +G KT VWQ                SS T+    +GVYD+ETYSMNFDQGTGWMEPDNLPRSFSAR+ADPSRILP KHLL
Sbjct:   27 PHYRSYSPSSCDGTKTTVWQMLWRKLKRSSDKKKVFSSHTTM---EGVYDQETYSMNFDQGTGWMEPDNLPRSFSARFADPSRILPPKHLL 114          
BLAST of GR393664 vs. TrEMBL
Match: B9H9D3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763402 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.122e-10
Identity = 37/73 (50.68%), Postives = 41/73 (56.16%), Query Frame = 2
Query:   35 NGKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRIL 253
            +G K  WQ            +FN S  TS       YD + YS NFDQGT W EP+ L RSFSARYADPSRIL
Sbjct:   25 DGPKPRWQVFWRKINRGKKKIFNVSPVTSQAS----YDLDEYSQNFDQGTDWAEPEILSRSFSARYADPSRIL 93          
BLAST of GR393664 vs. TrEMBL
Match: B9IKP3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578122 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.509e-9
Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 2
Query:   38 GKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRIL 253
            G K  WQ            +  +S  TS       YD + YS NFDQGT W +P++L RSFSARYADPSR+L
Sbjct:   24 GPKPRWQVFWRKTNGGKKRILKASLVTSVQAS---YDPDEYSQNFDQGTDWTKPEDLSRSFSARYADPSRVL 92          
BLAST of GR393664 vs. TrEMBL
Match: B9RS66_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0803390 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8
Identity = 32/73 (43.84%), Postives = 37/73 (50.68%), Query Frame = 2
Query:   26 SNYNGKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPS 244
            +N N  K  W             +F+S   T        YD + Y  NFD GTGW EPDNL RSFSAR+ADPS
Sbjct:   34 NNINNNKWAWHRLWRRISREKKKIFSSVPVTLQAS----YDPQEYHQNFDHGTGWTEPDNLSRSFSARFADPS 102          
BLAST of GR393664 vs. TAIR peptide
Match: AT2G25735.1 (| Symbols: | unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:10975345-10975704 REVERSE LENGTH=119)

HSP 1 Score: 54.299 bits (129), Expect = 1.832e-8
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 2
Query:  143 YDEETYSMNFDQGTGWM---EPDNLPRSFSARYADPSRILPSKHLL 271
            Y+   YS+NFDQG GW    EP+NL RSFS R+ADP+RI  ++ LL
Sbjct:   73 YEPCDYSLNFDQGPGWHDHDEPENLSRSFSCRFADPTRIRETRFLL 118          
The following BLAST results are available for this feature:
BLAST of GR393664 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6TED9_SOYBN3.010e-2161.54Putative uncharacterized protein OS=Glycine max PE... [more]
B9H9D3_POPTR3.122e-1050.68Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IKP3_POPTR4.509e-945.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RS66_RICCO1.004e-843.84Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of GR393664 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G25735.11.832e-856.52| Symbols: | unknown protein; Has 31 Blast hits t... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..31
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393664 ID=GR393664; Name=GR393664; organism=Cicer arietinum; type=EST; length=286bp
GCCACACTATGATACCAATTCATCAAGCAACTATAATGGTAAAAAAACAG
TGTGGCAGAAGATTTGGAGAAAGATGAAAAGAAATAAGAAGAAAGTTTTC
AATTCTTCTTCTCCTACTTCTTCTACAGTGGATGATGGTGTGTATGATGA
AGAAACATATTCAATGAACTTTGATCAAGGAACAGGGTGGATGGAACCAG
ATAATCTTCCTCGTTCATTCTCAGCTCGGTATGCTGATCCATCTAGGATC
TTGCCATCTAAACATTTATTAGTCTGATATGGTTAC
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