GR393664
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393664 vs. TrEMBL
Match: C6TED9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.010e-21 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 2 PHYDTNSSSNYNGKKT-VWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRILPSKHLL 271 PHY + S S+ +G KT VWQ SS T+ +GVYD+ETYSMNFDQGTGWMEPDNLPRSFSAR+ADPSRILP KHLL Sbjct: 27 PHYRSYSPSSCDGTKTTVWQMLWRKLKRSSDKKKVFSSHTTM---EGVYDQETYSMNFDQGTGWMEPDNLPRSFSARFADPSRILPPKHLL 114
BLAST of GR393664 vs. TrEMBL
Match: B9H9D3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763402 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.122e-10 Identity = 37/73 (50.68%), Postives = 41/73 (56.16%), Query Frame = 2 Query: 35 NGKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRIL 253 +G K WQ +FN S TS YD + YS NFDQGT W EP+ L RSFSARYADPSRIL Sbjct: 25 DGPKPRWQVFWRKINRGKKKIFNVSPVTSQAS----YDLDEYSQNFDQGTDWAEPEILSRSFSARYADPSRIL 93
BLAST of GR393664 vs. TrEMBL
Match: B9IKP3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578122 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.509e-9 Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 2 Query: 38 GKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPSRIL 253 G K WQ + +S TS YD + YS NFDQGT W +P++L RSFSARYADPSR+L Sbjct: 24 GPKPRWQVFWRKTNGGKKRILKASLVTSVQAS---YDPDEYSQNFDQGTDWTKPEDLSRSFSARYADPSRVL 92
BLAST of GR393664 vs. TrEMBL
Match: B9RS66_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0803390 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8 Identity = 32/73 (43.84%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 26 SNYNGKKTVWQXXXXXXXXXXXXVFNSSSPTSSTVDDGVYDEETYSMNFDQGTGWMEPDNLPRSFSARYADPS 244 +N N K W +F+S T YD + Y NFD GTGW EPDNL RSFSAR+ADPS Sbjct: 34 NNINNNKWAWHRLWRRISREKKKIFSSVPVTLQAS----YDPQEYHQNFDHGTGWTEPDNLSRSFSARFADPS 102
BLAST of GR393664 vs. TAIR peptide
Match: AT2G25735.1 (| Symbols: | unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:10975345-10975704 REVERSE LENGTH=119) HSP 1 Score: 54.299 bits (129), Expect = 1.832e-8 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 2 Query: 143 YDEETYSMNFDQGTGWM---EPDNLPRSFSARYADPSRILPSKHLL 271 Y+ YS+NFDQG GW EP+NL RSFS R+ADP+RI ++ LL Sbjct: 73 YEPCDYSLNFDQGPGWHDHDEPENLSRSFSCRFADPTRIRETRFLL 118 The following BLAST results are available for this feature:
BLAST of GR393664 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR393664 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393664 ID=GR393664; Name=GR393664; organism=Cicer arietinum; type=EST; length=286bpback to top |