GR395019

EST Overview


Name	GR395019
Unique Name	GR395019
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	370

Libraries


Library Name	Type
LIBEST_024780 ICC1882 PEG induced drought cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR395019 vs. TrEMBL
Match: Q8LCM7_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = -3

Query:  126 GGFEXQVKYRAKEVKSFFKKGVRIVGNSWKKGWSKVKHIKK 248
            G FE QVK RA E+K  FKKG+++VG S KKGWSKVK++++
Sbjct:    2 GAFEDQVKMRALELKHLFKKGIKVVGKSCKKGWSKVKNLRR 42

[Close]

BLAST of GR395019 vs. TrEMBL
Match: D7L4J5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900440 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = -3

Query:  108 GGFEXQVKYRAKEVKSFFKKGVRIVGNSWKKGWSKVKHIKK*SINIS 248
            G FE QVK RA E+K  FKKG+++VG S KKGWSKVK++++   ++S
Sbjct:    2 GAFEDQVKMRALELKHLFKKGIKVVGKSCKKGWSKVKNLRQAGDDVS 48

[Close]

BLAST of GR395019 vs. TrEMBL
Match: A9PDN1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = -3

Query:  126 GGFEXQVKYRAKEVKSFFKKGVRIVGNSWKKGWSKVKHIKK 248
            G FE +VK RAKE+   FKKGV+IVG S KKGW KVK++KK
Sbjct:    2 GDFENKVKVRAKELTVLFKKGVKIVGESCKKGWIKVKNMKK 42

The following BLAST results are available for this feature:

BLAST of GR395019 vs. TrEMBL

BLAST of GR395019 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3


Match Name	E-value	Identity	Description
Q8LCM7_ARATH	2.461e-7	60.98	Putative uncharacterized protein OS=Arabidopsis th...	[more]
D7L4J5_ARALY	2.461e-7	55.32	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9PDN1_POPTR	7.160e-7	65.85	Putative uncharacterized protein OS=Populus tricho...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 63..77 score: NAcoord: 81..94 score
None	No IPR available	SEG	seg	seg	coord: 19..43 score
None	No IPR available	SEG	seg	seg	coord: 42..53 score
None	No IPR available	SEG	seg	seg	coord: 13..38 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR395019 ID=GR395019; Name=GR395019; organism=Cicer arietinum; type=EST; length=370bp
AAAAACAAAACAAGTATATATAGATTCAGAAAATCAAATTATACATCAAA
ACCAAACCTATGGAGATAAAATACAAACAAAAGAAAAAAAATAAAAACAA
TAAGAGTTGAAATATTTATGGATCATTTTTTGATATGCTTGACTTTGCTC
CATCCTTTCTTCCATGAATTTCCAACAATCCTCACTCCCTTCTTGAAAAA
TGACTTGACCTCCTTGGCTCTGTACTTCACCTGNTGTTCAAACCCACCCN
TCGTAAGAGAGAGAGAGAGAGAGAGAGATGGTTTTTTTANAGAGAGAGAG
ATGGTTTTTTTANAGAGAGAGAGAGAGAGGAGAACTACNAAGTTAAAACN
CCCCCGCGTACTCTGCGTTG

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