GR395208
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR395208 vs. TrEMBL
Match: C6SY88_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.119e-25 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 3 Query: 306 DQLV--ADPLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCE 515 DQLV ADPL DM+SLFQQLP+KRGLSKFYQGKSQSFTSLTNV+SLEDL KPE+PYNK+LKSCKSY G E Sbjct: 63 DQLVVVADPLGDMTSLFQQLPIKRGLSKFYQGKSQSFTSLTNVRSLEDLAKPENPYNKRLKSCKSYAGGLAE 134
BLAST of GR395208 vs. TrEMBL
Match: C6SX99_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.026e-25 Identity = 71/138 (51.45%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 306 DQLV--ADPLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCERQDFSKCNFKSTSAMSRLVXXXXXXXXXXXXXXXXXNFMXXXXXXXXXXXXXXXTNNMSNQTALFA 713 DQLV ADPL+DMSSLFQQLP+KRGLSKFYQGKSQSFTSLTNV+SLEDLVKPE+P+NK+LKS KSY G E + + S + NFM TN + NQT LFA Sbjct: 103 DQLVVVADPLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVRSLEDLVKPENPHNKRLKSYKSYAGGLAESH-----STRVVSKGGMMHSTSSRGSCSSLGRGSVTNFMGSNSRPSIPSHRSTSTNTIPNQTVLFA 235
BLAST of GR395208 vs. TrEMBL
Match: C6T9E9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.262e-22 Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 306 DQLVADPLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCERQDFSKCNFKSTS 554 DQ +PL+DMSSLFQQLP+KRGLSK+Y+GK+QSFTS+ V SLEDLVKPE+PYNKKLK+C SYG E C+ S + Sbjct: 49 DQPATEPLSDMSSLFQQLPIKRGLSKYYEGKAQSFTSIAKVNSLEDLVKPENPYNKKLKTCSSYGGVMGETSQRGSCSSLSAN 131
BLAST of GR395208 vs. TrEMBL
Match: A5CAQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037769 PE=4 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.371e-20 Identity = 52/75 (69.33%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 306 DQLV--ADPLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCERQD 524 DQL A L+DMSSLFQ LP KRGLSK+YQGKS+SFTSL+NV+ LEDL KPE+PYNKKLK+ +SYG G E+ D Sbjct: 46 DQLAPPATALHDMSSLFQHLPFKRGLSKYYQGKSESFTSLSNVRCLEDLAKPENPYNKKLKTSRSYGGGLSEKID 120
BLAST of GR395208 vs. TrEMBL
Match: D7TA51_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_79.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035279001 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.524e-19 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 3 Query: 336 MSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCERQD 524 MSSLFQ LP KRGLSK+YQGKS+SFTSL+NV+ LEDL KPE+PYNKKLK+ +SYG G E+ D Sbjct: 1 MSSLFQHLPFKRGLSKYYQGKSESFTSLSNVRCLEDLAKPENPYNKKLKTSRSYGGGLSEKID 63
BLAST of GR395208 vs. TrEMBL
Match: A5BBL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011279 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.201e-16 Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEG 506 PL ++S L QLP+KRGLSK+Y+GKSQSFTSL++V+S+EDL K ESPY +K+K CKSYG G Sbjct: 93 PLYELSELMAQLPIKRGLSKYYEGKSQSFTSLSSVRSIEDLAKKESPYRRKMKVCKSYGGG 153
BLAST of GR395208 vs. TrEMBL
Match: D7TBF0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015284001 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.786e-16 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEG 506 PL ++S L QLP+KRGLSK++QGKSQSFTSL +VKSLEDL K +P KK+KSCKSYG G Sbjct: 48 PLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSLEDLAKKGTPSRKKMKSCKSYGGG 108
BLAST of GR395208 vs. TrEMBL
Match: B5A2D5_ELAGV (Putative uncharacterized protein OS=Elaeis guineensis var. tenera PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.017e-15 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEG 506 PL D+SSL QLP KRGLSK+YQGKSQSFTSL++V+ L+DL K E+P+ +K+KSCKSY G Sbjct: 66 PLYDLSSLTAQLPSKRGLSKYYQGKSQSFTSLSDVRCLQDLPKKETPFRRKMKSCKSYAGG 126
BLAST of GR395208 vs. TrEMBL
Match: C6SYZ5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.468e-14 Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEGFCERQDFSKCNFKST 551 PL ++S L LP+KRGLS FYQGK+QSFTSL V+S+EDL K +PY+K++KSCKS+G G ++ C+ KST Sbjct: 79 PLFELSDLMSHLPIKRGLSMFYQGKAQSFTSLARVESIEDLPKKGTPYSKRMKSCKSFGGGLNSQR--LLCSPKST 152
BLAST of GR395208 vs. TrEMBL
Match: D7STJ3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035317001 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.272e-14 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 312 LVADPLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSCKSYGEG 506 LV PL ++S L LP+KRGLSK++QGKS+SFTSL+NV +EDL + E+P +++KSCKSYG G Sbjct: 82 LVNGPLYELSDLMAILPIKRGLSKYFQGKSKSFTSLSNVSCIEDLARRETPLRRRMKSCKSYGGG 146
BLAST of GR395208 vs. TAIR peptide
Match: AT5G56550.1 (| Symbols: OXS3, ATOXS3 | oxidative stress 3 | chr5:22895847-22896502 REVERSE LENGTH=172) HSP 1 Score: 72.7886 bits (177), Expect = 2.221e-13 Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVK---PESPYNKKLKSCKSYG 500 PL D+S L LP+KRGLSKFY+GKSQSFTSL NVKSLEDL+K Y K KS +S G Sbjct: 74 PLEDLSDLMSHLPIKRGLSKFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTG 135
BLAST of GR395208 vs. TAIR peptide
Match: AT3G43850.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:15702085-15704152 REVERSE LENGTH=270) HSP 1 Score: 68.1662 bits (165), Expect = 5.469e-12 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSL--EDLVKPESPYNKKLKSCKSYGEGFCERQDFSKCNFKSTSAMSR 566 PL+ M SL + LP+KR +SKFY+GKS+SF SL+ SL +DL KPE+ Y+++ ++ S+ C R SK FKS AMS+ Sbjct: 51 PLDMMESLEEALPIKRAISKFYKGKSKSFMSLSETSSLPVKDLTKPENLYSRRRRNLLSH--RICSRGGISKKPFKSVLAMSQ 131
BLAST of GR395208 vs. TAIR peptide
Match: AT4G26288.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). | chr4:13307623-13308217 FORWARD LENGTH=155) HSP 1 Score: 60.077 bits (144), Expect = 1.489e-9 Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPM----KRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLKSC 488 P +D+S L QLP+ K GLSK+Y+GKSQSFTSL NV SL+DLVK S + KSC Sbjct: 59 PFDDLSDLISQLPIIQVKKGGLSKYYKGKSQSFTSLANVTSLQDLVKRGS----RTKSC 113
BLAST of GR395208 vs. TAIR peptide
Match: AT5G21940.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7249446-7250353 REVERSE LENGTH=264) HSP 1 Score: 58.5362 bits (140), Expect = 4.334e-9 Identity = 28/62 (45.16%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 324 PLNDMSSLFQQLPMKRGLSKFYQGKSQSFT--------SLTNVKSLEDLVKPESPYNKKLKS 485 PL M SL Q LP+++G+SK+Y GKS+SFT +LT+ S++DL KPE+PY+++ ++ Sbjct: 74 PLEMMESLEQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRN 135
BLAST of GR395208 vs. TAIR peptide
Match: AT3G03170.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:732066-732729 FORWARD LENGTH=156) HSP 1 Score: 56.6102 bits (135), Expect = 1.647e-8 Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 366 KRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKKLK 482 +RGLSK Y+GKSQSFT+L ++EDL KPE+P+N KLK Sbjct: 56 RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAKLK 94
BLAST of GR395208 vs. TAIR peptide
Match: AT5G24890.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:8558357-8559172 REVERSE LENGTH=240) HSP 1 Score: 51.9878 bits (123), Expect = 4.056e-7 Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 327 LNDMSSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKK 476 L MSSL LP KRGLS Y+GKS+SF +L + S++++ K E+P NK+ Sbjct: 95 LASMSSLEDSLPSKRGLSNHYKGKSKSFGNLGEIGSVKEVAKQENPLNKR 144
BLAST of GR395208 vs. TAIR peptide
Match: AT4G31510.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:15276328-15277219 REVERSE LENGTH=214) HSP 1 Score: 51.2174 bits (121), Expect = 6.919e-7 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 3 Query: 339 SSLFQQLPMKRGLSKFYQGKSQSFTSLTNVKSLEDLVKPESPYNKK 476 SSL LP+KRGLS Y GKS+SF +L + DLVK ESP NK+ Sbjct: 74 SSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTNDLVKVESPLNKR 119 The following BLAST results are available for this feature:
BLAST of GR395208 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR395208 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR395208 ID=GR395208; Name=GR395208; organism=Cicer arietinum; type=EST; length=741bpback to top |