HO064649

EST Overview
NameHO064649
Unique NameHO064649
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length706
Libraries
Library NameType
LIBEST_026411 Chickpea drought stressed cDNA SSH library AR2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO064649 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.416e-13
Identity = 42/77 (54.55%), Postives = 46/77 (59.74%), Query Frame = -1
Query:  263 KGAKFVISEKI-GVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AK    +K  G K GGHV  PHPSKQ SK             TPKS G + CKPCNRSF +E AL SH+KAKHSA
Sbjct:  204 KKAKLTTPQKTDGKKGGGHVATPHPSKQASK-------------TPKSAGSHHCKPCNRSFGSEGALDSHSKAKHSA 267          
BLAST of HO064649 vs. SwissProt
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.578e-11
Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = -1
Query:  263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSK--AAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AKFV  +K   K    HV  PHPSKQ  K     +  +   +QQTPKS G + CK C R+F +E  L SH KAKHSA
Sbjct:  214 KKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 292          
BLAST of HO064649 vs. SwissProt
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.620e-9
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = -1
Query:  260 SEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 469
            ++K G K G  HV  PHP+K   K  ANN+K  + +++PKS G   CK C+++F +E AL +H+KAKH AK
Sbjct:  237 AQKTGGKKGATHVATPHPAK--GKTPANNDK--LTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK 303          
BLAST of HO064649 vs. SwissProt
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.161e-7
Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = -1
Query:  263 SEKIGVKNGG--HVDIPHPSKQVSKAAANNNKQPVKQQT-PKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 469
            S+K G K G   HV  PHP+K   K   NN+K     ++ PKS G   CKPC++SF +E AL +H++AK  A
Sbjct:  232 SQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETALQAHSRAKMGA 301          
BLAST of HO064649 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.516e-7
Identity = 32/80 (40.00%), Postives = 37/80 (46.25%), Query Frame = -1
Query:  260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499
            +  K AK    EK   K   HV  PHPSK+  K   +      K QTP S G  SC  C +SF  E  L  H KAKH  +
Sbjct:  221 ISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNST-----KGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGGQ 295          
BLAST of HO064649 vs. TrEMBL
Match: Q2PER8_TRIPR (Putative histone deacetylase OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.369e-24
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = -1
Query:  260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499
            V VK AKF   EK G KNG HVD P+P + V   A  NNK P+KQQTP+S GDYSCKPC RSFKTEDALGSHN+AKHSAK
Sbjct:  227 VAVKRAKFATPEKTGSKNGVHVDTPYPKQTVKSGA--NNKPPMKQQTPQSTGDYSCKPCKRSFKTEDALGSHNRAKHSAK 304          
BLAST of HO064649 vs. TrEMBL
Match: C6TC87_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.847e-22
Identity = 56/80 (70.00%), Postives = 57/80 (71.25%), Query Frame = -1
Query:  260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499
            V VK  KFV  +K   KN  HV  PHPSKQ  KA ANN     KQQTPKS GDYSCKPCNRSFKTEDAL SHNKAKHS K
Sbjct:  214 VPVKKTKFVTPQKTDSKNVVHVATPHPSKQTGKATANN-----KQQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKHSTK 288          
BLAST of HO064649 vs. TrEMBL
Match: D7TJ15_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033774001 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.591e-14
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = -1
Query:  263 KGAKFVISEKIG------VKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AKFV  +K         K+GGHV  P+PSKQ  K  AN  K   KQQ  KS G +SCK CNRSF +E+AL SH KAKH+A
Sbjct:   68 KKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKTPANTEKP--KQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTA 147          
BLAST of HO064649 vs. TrEMBL
Match: B9SN80_RICCO (Histone deacetylase 2a, putative OS=Ricinus communis GN=RCOM_1186440 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.041e-12
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = -1
Query:  260 KGAKFVISEKIGV-KNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 490
            K AK +  +K    K GGH   PHP+K  +KA+AN N    + QTPKS G +SC  C RSF ++ AL SH+KAKHS+K
Sbjct:  234 KKAKLITPQKTADGKKGGHTATPHPAKG-AKASANGNTPKPQTQTPKSGGKFSCNSCERSFGSDAALQSHSKAKHSSK 310          
BLAST of HO064649 vs. TrEMBL
Match: B9MTN7_POPTR (Histone deacetylase OS=Populus trichocarpa GN=HDT903 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.372e-11
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = -1
Query:  263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AKFV  +K  +K  G H+  PHPSKQ +K +AN+ +   K+Q  KS   +SC  CNRSF +E+AL SH+KAKHSA
Sbjct:  200 KKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSANSQR---KEQAQKS---FSCNSCNRSFGSENALQSHSKAKHSA 270          
BLAST of HO064649 vs. TrEMBL
Match: A9PC74_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.372e-11
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = -1
Query:  263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AKFV  +K  +K  G H+  PHPSKQ +K +AN+ +   K+Q  KS   +SC  CNRSF +E+AL SH+KAKHSA
Sbjct:  234 KKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSANSQR---KEQAQKS---FSCNSCNRSFGSENALQSHSKAKHSA 304          
BLAST of HO064649 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.212e-11
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = -1
Query:  263 VIVKGAKFVISEKI-GVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 499
            V  K AK V  +K  G K G H   PHP+K+  K  A+ +K   K Q+PKS G  SCK C+++F +E+AL SH+KAKH A
Sbjct:  275 VPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKG--KGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKHGA 352          
BLAST of HO064649 vs. TrEMBL
Match: Q9M4T5_ORYSA (Putative histone deacetylase HD2 OS=Oryza sativa PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1
Query:  260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466
            +K G K G HV  PHP+KQ SK   N+     K+++PKS G   SCK C+++F +E AL SH+KAKH AK
Sbjct:  231 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 297          
BLAST of HO064649 vs. TrEMBL
Match: Q688F7_ORYSJ (Putative histone deacetylase HD2 OS=Oryza sativa subsp. japonica GN=OSJNBa0035I01.3 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1
Query:  260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466
            +K G K G HV  PHP+KQ SK   N+     K+++PKS G   SCK C+++F +E AL SH+KAKH AK
Sbjct:  231 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 297          
BLAST of HO064649 vs. TrEMBL
Match: Q5KQG2_ORYSJ (Putative histone deacetylase HD2 OS=Oryza sativa subsp. japonica GN=OSJNBb0086G17.13 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1
Query:  260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466
            +K G K G HV  PHP+KQ SK   N+     K+++PKS G   SCK C+++F +E AL SH+KAKH AK
Sbjct:  208 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 274          
BLAST of HO064649 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294)

HSP 1 Score: 67.781 bits (164), Expect = 6.682e-12
Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = -1
Query:  263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSK--AAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490
            K AKFV  +K   K    HV  PHPSKQ  K     +  +   +QQTPKS G + CK C R+F +E  L SH KAKHSA
Sbjct:  214 KKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 292          
The following BLAST results are available for this feature:
BLAST of HO064649 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
HDT1_SOLCH2.416e-1354.55Histone deacetylase HDT1 OS=Solanum chacoense GN=H... [more]
HDT3_ARATH6.578e-1148.10Histone deacetylase HDT3 OS=Arabidopsis thaliana G... [more]
HDT2_MAIZE1.620e-946.48Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 ... [more]
HDT1_MAIZE1.161e-744.44Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 ... [more]
HDT1_SOYBN1.516e-740.00Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE... [more]
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BLAST of HO064649 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2PER8_TRIPR5.369e-2470.00Putative histone deacetylase OS=Trifolium pratense... [more]
C6TC87_SOYBN3.847e-2270.00Putative uncharacterized protein OS=Glycine max PE... [more]
D7TJ15_VITVI8.591e-1453.66Whole genome shotgun sequence of line PN40024, sca... [more]
B9SN80_RICCO8.041e-1250.00Histone deacetylase 2a, putative OS=Ricinus commun... [more]
B9MTN7_POPTR1.372e-1151.95Histone deacetylase OS=Populus trichocarpa GN=HDT9... [more]
A9PC74_POPTR1.372e-1151.95Putative uncharacterized protein OS=Populus tricho... [more]
D7SN59_VITVI5.212e-1147.50Whole genome shotgun sequence of line PN40024, sca... [more]
Q9M4T5_ORYSA5.762e-1050.00Putative histone deacetylase HD2 OS=Oryza sativa P... [more]
Q688F7_ORYSJ5.762e-1050.00Putative histone deacetylase HD2 OS=Oryza sativa s... [more]
Q5KQG2_ORYSJ5.762e-1050.00Putative histone deacetylase HD2 OS=Oryza sativa s... [more]
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BLAST of HO064649 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G03740.16.682e-1248.10| Symbols: HD2C, HDT3 | histone deacetylase 2C | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..10
score
NoneNo IPR availableSEGsegsegcoord: 8..25
score
IPR007087Zinc finger, C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 80..101
score
IPR007087Zinc finger, C2H2-typePROFILEPS50157ZINC_FINGER_C2H2_2coord: 78..104
score: 11
IPR013087Zinc finger, C2H2-type/integrase, DNA-bindingGENE3D3.30.160.60no descriptioncoord: 78..100
score: 0.0

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO064649 ID=HO064649; Name=HO064649; organism=Cicer arietinum; type=EST; length=706bp
GTTTTTTTAGGAAACCAAACAAGTCCTACTATATCTCAAACACCCAATCA
TGTTCCTACCAATACATGGTGACTGGATAGGTAGACGAGGCCATAAACCC
AAAGGATCCTCTTTCAATTCGATAATCCAAGTTTAACAATACTTTTAACA
TCAAAAACATCAGATTGCTTTTCTAAATCAAACTATTTTTTTAGTCACCC
AACATCCAAAACAACATCAAGATGCCCACTGTTTAGTCATAAAGCTAACA
AACCCTTCACTTGGCACTGTGCTTGGCCTTATTATGAGAACCTAAGGCAT
CTTCGGTCTTAAATGACCTATTGCAGGGCTTGCAGCTGTAATCCCCATTT
GACTTTGGAGTCTGCTGCTTCACTGGCTGCTTATTATTGTTTGCAGCTGC
TTTACTAACCTGCTTAGAAGGGTGTGGAATATCAACATGGCCACCATTCT
TCACACCAATTTTTTCAGAAATAACAAATTTTGCCCCCTTCACAATAACC
TGCCCCGACCCGCAATTAAAAAAAATTAATAAATTTTTCGGCCAATTATA
TTCAAATATTATAAAAAAAACTCACAATGTTTTTTGAAAACTAAAAATTT
TAAAATTACTCAAAAAATATTAATTGGTAAAAATTATAAAACTTTTCAAT
CAAAAAATATAATTTATTTAAATACCTATTAAATCCAATAATTTTAAAAA
ACTATT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR007087Znf_C2H2
IPR013087Znf_C2H2_type