HO064649
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO064649 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.416e-13 Identity = 42/77 (54.55%), Postives = 46/77 (59.74%), Query Frame = -1 Query: 263 KGAKFVISEKI-GVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AK +K G K GGHV PHPSKQ SK TPKS G + CKPCNRSF +E AL SH+KAKHSA Sbjct: 204 KKAKLTTPQKTDGKKGGGHVATPHPSKQASK-------------TPKSAGSHHCKPCNRSFGSEGALDSHSKAKHSA 267
BLAST of HO064649 vs. SwissProt
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.578e-11 Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = -1 Query: 263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSK--AAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AKFV +K K HV PHPSKQ K + + +QQTPKS G + CK C R+F +E L SH KAKHSA Sbjct: 214 KKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 292
BLAST of HO064649 vs. SwissProt
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.620e-9 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = -1 Query: 260 SEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 469 ++K G K G HV PHP+K K ANN+K + +++PKS G CK C+++F +E AL +H+KAKH AK Sbjct: 237 AQKTGGKKGATHVATPHPAK--GKTPANNDK--LTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGAK 303
BLAST of HO064649 vs. SwissProt
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.161e-7 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = -1 Query: 263 SEKIGVKNGG--HVDIPHPSKQVSKAAANNNKQPVKQQT-PKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 469 S+K G K G HV PHP+K K NN+K ++ PKS G CKPC++SF +E AL +H++AK A Sbjct: 232 SQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETALQAHSRAKMGA 301
BLAST of HO064649 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.516e-7 Identity = 32/80 (40.00%), Postives = 37/80 (46.25%), Query Frame = -1 Query: 260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499 + K AK EK K HV PHPSK+ K + K QTP S G SC C +SF E L H KAKH + Sbjct: 221 ISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNST-----KGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGGQ 295
BLAST of HO064649 vs. TrEMBL
Match: Q2PER8_TRIPR (Putative histone deacetylase OS=Trifolium pratense PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.369e-24 Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = -1 Query: 260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499 V VK AKF EK G KNG HVD P+P + V A NNK P+KQQTP+S GDYSCKPC RSFKTEDALGSHN+AKHSAK Sbjct: 227 VAVKRAKFATPEKTGSKNGVHVDTPYPKQTVKSGA--NNKPPMKQQTPQSTGDYSCKPCKRSFKTEDALGSHNRAKHSAK 304
BLAST of HO064649 vs. TrEMBL
Match: C6TC87_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.847e-22 Identity = 56/80 (70.00%), Postives = 57/80 (71.25%), Query Frame = -1 Query: 260 VIVKGAKFVISEKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 499 V VK KFV +K KN HV PHPSKQ KA ANN KQQTPKS GDYSCKPCNRSFKTEDAL SHNKAKHS K Sbjct: 214 VPVKKTKFVTPQKTDSKNVVHVATPHPSKQTGKATANN-----KQQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKHSTK 288
BLAST of HO064649 vs. TrEMBL
Match: D7TJ15_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033774001 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.591e-14 Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = -1 Query: 263 KGAKFVISEKIG------VKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AKFV +K K+GGHV P+PSKQ K AN K KQQ KS G +SCK CNRSF +E+AL SH KAKH+A Sbjct: 68 KKAKFVTPQKTDGKKSDDKKSGGHVATPYPSKQAGKTPANTEKP--KQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTA 147
BLAST of HO064649 vs. TrEMBL
Match: B9SN80_RICCO (Histone deacetylase 2a, putative OS=Ricinus communis GN=RCOM_1186440 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.041e-12 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = -1 Query: 260 KGAKFVISEKIGV-KNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSAK 490 K AK + +K K GGH PHP+K +KA+AN N + QTPKS G +SC C RSF ++ AL SH+KAKHS+K Sbjct: 234 KKAKLITPQKTADGKKGGHTATPHPAKG-AKASANGNTPKPQTQTPKSGGKFSCNSCERSFGSDAALQSHSKAKHSSK 310
BLAST of HO064649 vs. TrEMBL
Match: B9MTN7_POPTR (Histone deacetylase OS=Populus trichocarpa GN=HDT903 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.372e-11 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AKFV +K +K G H+ PHPSKQ +K +AN+ + K+Q KS +SC CNRSF +E+AL SH+KAKHSA Sbjct: 200 KKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSANSQR---KEQAQKS---FSCNSCNRSFGSENALQSHSKAKHSA 270
BLAST of HO064649 vs. TrEMBL
Match: A9PC74_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.372e-11 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AKFV +K +K G H+ PHPSKQ +K +AN+ + K+Q KS +SC CNRSF +E+AL SH+KAKHSA Sbjct: 234 KKAKFVTPQKTDLKKAGVHIATPHPSKQAAKTSANSQR---KEQAQKS---FSCNSCNRSFGSENALQSHSKAKHSA 304
BLAST of HO064649 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.212e-11 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 263 VIVKGAKFVISEKI-GVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 499 V K AK V +K G K G H PHP+K+ K A+ +K K Q+PKS G SCK C+++F +E+AL SH+KAKH A Sbjct: 275 VPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKG--KGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKHGA 352
BLAST of HO064649 vs. TrEMBL
Match: Q9M4T5_ORYSA (Putative histone deacetylase HD2 OS=Oryza sativa PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1 Query: 260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466 +K G K G HV PHP+KQ SK N+ K+++PKS G SCK C+++F +E AL SH+KAKH AK Sbjct: 231 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 297
BLAST of HO064649 vs. TrEMBL
Match: Q688F7_ORYSJ (Putative histone deacetylase HD2 OS=Oryza sativa subsp. japonica GN=OSJNBa0035I01.3 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1 Query: 260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466 +K G K G HV PHP+KQ SK N+ K+++PKS G SCK C+++F +E AL SH+KAKH AK Sbjct: 231 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 297
BLAST of HO064649 vs. TrEMBL
Match: Q5KQG2_ORYSJ (Putative histone deacetylase HD2 OS=Oryza sativa subsp. japonica GN=OSJNBb0086G17.13 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.762e-10 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = -1 Query: 260 EKIGVKNGGHVDIPHPSKQVSKAAANNNKQPVKQQTPKSNG-DYSCKPCNRSFKTEDALGSHNKAKHSAK 466 +K G K G HV PHP+KQ SK N+ K+++PKS G SCK C+++F +E AL SH+KAKH AK Sbjct: 208 QKTGDKKGVHVATPHPAKQASKTPVNDKS---KEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 274
BLAST of HO064649 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294) HSP 1 Score: 67.781 bits (164), Expect = 6.682e-12 Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = -1 Query: 263 KGAKFVISEKIGVKNGG-HVDIPHPSKQVSK--AAANNNKQPVKQQTPKSNGDYSCKPCNRSFKTEDALGSHNKAKHSA 490 K AKFV +K K HV PHPSKQ K + + +QQTPKS G + CK C R+F +E L SH KAKHSA Sbjct: 214 KKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 292 The following BLAST results are available for this feature:
BLAST of HO064649 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of HO064649 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO064649 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO064649 ID=HO064649; Name=HO064649; organism=Cicer arietinum; type=EST; length=706bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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