GR407566
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407566 vs. SwissProt
Match: NUA_ARATH (Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.993e-47 Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VSVLK EKE+LSNAEKRASDEV LS+RV+RLQATL T+QS KQEE+ K+L+REWAEAKKELQEER N R DR+QT+ +++ QVE+M KEL NA+ ++ +LS ++ +RS+D K ++MD+ G +S E+ EL+TAKEEIEKL+ EV ++K+HMLQYKSIA+V Sbjct: 786 VSVLKQEKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAERRKQEEHIKQLQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKELANALKAVSVAESRASVAEARLSDLEKKIRSSDPKTLDMDS-GGIVSLSDKEMSIELRTAKEEIEKLRGEVESSKSHMLQYKSIAQV 977
BLAST of GR407566 vs. TrEMBL
Match: D7T103_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_85.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036698001 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.301e-51 Identity = 108/193 (55.96%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VS LK+EKE+LSN+EKRASDEVR+LSERVHRLQATL TI S KQEE+ +++EREWAEAKKELQEER+NVR L LDR+QT+K+++RQVE+M KEL A+ ++ + S ++ ++S++ K+V ++ GPS S+ E V +L KEEIEKLKEE ANKAHMLQYKSIAEV Sbjct: 786 VSFLKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREEARTVERRKQEEHIRQIEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKELAKALQAVAAAEARAAVAEARYSDLEKKLKSSETKVVEINGECGPSSSSAHEAVVDLHIEKEEIEKLKEEAQANKAHMLQYKSIAEV 978
BLAST of GR407566 vs. TrEMBL
Match: B9RYK2_RICCO (Nucleoprotein TPR, putative OS=Ricinus communis GN=RCOM_1128370 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.435e-46 Identity = 100/193 (51.81%), Postives = 137/193 (70.98%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VSVLK+EK+++S+AEKRA DEVR+LSERV+RLQA+L TI S KQE+Y K++ER+WAE KKEL++ER NVR L DR++T+K+++RQVE+M +EL NA+ ++ KLS ++ M+++D K+ N+D PS +S+ EVV +L AKEEI+KLKEE ANK HM QYKSIA+V Sbjct: 796 VSVLKHEKQMVSSAEKRACDEVRSLSERVYRLQASLDTICSAEEVREEARAAERSKQEDYIKRIERDWAEVKKELEQERNNVRCLTSDREETLKNAMRQVEEMGRELANALHAVSAAETRAAVAEAKLSDLEKKMKTSDIKVANVDDGGIPSSMSTTEVVTDLLMAKEEIKKLKEEAQANKEHMQQYKSIAQV 988
BLAST of GR407566 vs. TrEMBL
Match: B9HI19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820461 PE=4 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.754e-44 Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDE--VVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VSVLK EKE+LSNAEKRA +EVR+LSERV+RLQATL TIQS KQEEY KK+EREW EAKKELQ+ER+NVR L DR+QT+K+++RQ++DM KEL N + ++ KLS ++ M+ +D K + + +IS++ VV +L AK+EI+KLKEE A+K HMLQYKSIA+V Sbjct: 786 VSVLKLEKEILSNAEKRACEEVRSLSERVYRLQATLDTIQSAEEAREEARAAEKRKQEEYVKKIEREWTEAKKELQQERDNVRALTSDREQTLKNAMRQIDDMGKELANTLHAVSAAETRAAVAETKLSELEKKMKVSDAK-GGIISFGYFCVISANMVLVVTDLLMAKDEIQKLKEEARASKEHMLQYKSIAQV 979
BLAST of GR407566 vs. TrEMBL
Match: A5AYB9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040288 PE=4 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.879e-38 Identity = 106/242 (43.80%), Postives = 131/242 (54.13%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXX----------------------------------KQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISS---------------DEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VS LK+EKE+LSN+EKRASDEVR+LSERVHRLQATL TI S KQEE+ +++EREWAEAKKELQEER+NVR L LDR+QT+K+++RQVE+M KEL A+ ++ R+ ++V ++ GPS S+ E V +L KEEIEKLKEE ANKAHMLQYKSIAEV Sbjct: 91 VSFLKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREVAHLVNLCLYLSILVAQPSHVMWLYNLAALWVLQEARTVERRKQEEHIRQIEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKELAKALQAVAAA----------------EARAAVAEVVEINGECGPSSSSAHEGCGITLGGNYPSKGEAVVDLHIEKEEIEKLKEEAQANKAHMLQYKSIAEV 316
BLAST of GR407566 vs. TrEMBL
Match: B9F2X6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08332 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.388e-35 Identity = 85/191 (44.50%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIA 574 +S+LKNEKE+L+ +EK+A +EV +L+ RVHRLQAT+ TI + QEEY K+LER+WAE KKELQE+R++VR L LD+ L+QVEDM KEL N+ + K S ++ ++S K + D G ++S+ E EL KEE+EK KEE ANK++MLQYK IA Sbjct: 777 MSILKNEKEILAKSEKKALEEVHDLTTRVHRLQATIDTIHATEEVQENARSIERRNQEEYIKRLERDWAEVKKELQEQRDHVRVLTLDKKNAFDGCLKQVEDMRKELQNSWKAATDAESRAAVAEAKCSDLETKLKS--RKTIFRD--GGRDILSATEENDELFQLKEELEKYKEEAQANKSYMLQYKEIA 963
BLAST of GR407566 vs. TrEMBL
Match: B8AID9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08886 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.388e-35 Identity = 85/191 (44.50%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIA 574 +S+LKNEKE+L+ +EK+A +EV +L+ RVHRLQAT+ TI + QEEY K+LER+WAE KKELQE+R++VR L LD+ L+QVEDM KEL N+ + K S ++ ++S K + D G ++S+ E EL KEE+EK KEE ANK++MLQYK IA Sbjct: 787 MSILKNEKEILAKSEKKALEEVHDLTTRVHRLQATIDTIHATEEVQENARSIERRNQEEYIKRLERDWAEVKKELQEQRDHVRVLTLDKKNAFDGCLKQVEDMRKELQNSWKAATDAESRAAVAEAKCSDLETKLKS--RKTIFRD--GGRDILSATEENDELFQLKEELEKYKEEAQANKSYMLQYKEIA 973
BLAST of GR407566 vs. TrEMBL
Match: C5XYX0_SORBI (Putative uncharacterized protein Sb04g028320 OS=Sorghum bicolor GN=Sb04g028320 PE=4 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.377e-33 Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIA 574 VS LKN KE L +EK+A DEVR+L+ERVHRLQAT+ TI + EE+ K+LER+WA+ KKELQE+R+ VR L+LD+ S ++QVEDM KEL N+ + K S ++ ++S K+++ D SG + S+ E EL KEE+EK KEE NK +M+QYK IA Sbjct: 767 VSTLKNAKENLEKSEKKALDEVRDLTERVHRLQATIDTIHTTEEVQENARSMERRNHEEHIKRLERDWADLKKELQEQRDQVRVLSLDKKNVFDSCMKQVEDMRKELNNSWKAASDAESRAAIAEAKCSDLEAKLKS--RKVISRD--SGHEISSASEESDELFQLKEELEKYKEEAQVNKNYMVQYKEIA 953
BLAST of GR407566 vs. TrEMBL
Match: C5PFY5_COCP7 (Viral A-type inclusion protein repeat containing protein OS=Coccidioides posadasii (strain C735) GN=CPC735_048080 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 6.517e-7 Identity = 43/207 (20.77%), Postives = 85/207 (41.06%), Query Frame = 2 Query: 11 LKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLV------------------NMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAE 577 LK EKE+ + EKR ++ +L RL +QS + + + LE E K++L +E E+ ++LAL R+ + + +++ED+ L + L ++ + ++S +E+LV ++A G L E+ E+ K ++E + E+ + YK+I++ Sbjct: 798 LKAEKELWKSIEKRLVEDNESLRNERSRLDTLNANLQSMLNEREHTESETRRRLQSTIESLESELQSTKRKLSDETEDAKKLALRREFDQEQTQKRIEDLVTSLGSIREELVATKTSKDHLQSRVDELSVELKSAEERLVVLQRKPSAAPASTTAAEEALEAGEGTGLSREQELAVEVSELKRDLELARSELTHAQEQAEDYKAISQ 1004
BLAST of GR407566 vs. TrEMBL
Match: B6QDI6_PENMQ (Filament-forming protein (Tpr/p270), putative OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=PMAA_078010 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 8.512e-7 Identity = 42/206 (20.39%), Postives = 85/206 (41.26%), Query Frame = 2 Query: 11 LKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPS-----------------LISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAE 577 LK EK++ N EKR D+ +L RL + +Q+ + + + LE E K++L +E E+ +R AL R+ + S ++++D+ L++ L K+ + ++S +EKL + G + L E+ E+ K ++E + ++ + + YK+I++ Sbjct: 787 LKAEKDLWKNIEKRLIDDNESLRNERGRLDSLNTNLQNILNEREHTDAESRRRLQHNVESLESELQSTKRKLNDEVEDAKRAALRREYEHEQSQKRIDDLVTSLSSVREELIAVKTTRDHLQTKVDELSVELKSAEEKLQVLQTKPGAAPGSTTATAETEQAPTSGLTREQELAIEVSELKRDLELARTDLEHAREQVEDYKAISQ 992
BLAST of GR407566 vs. TrEMBL
Match: A1DYH0_HORWE (Putative myosin-like protein (Fragment) OS=Hortaea werneckii PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 8.512e-7 Identity = 42/207 (20.29%), Postives = 84/207 (40.58%), Query Frame = 2 Query: 14 KNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGP-------------------SLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAE 577 K EK++ E R +++ +NL + RL + +Q+ + + T+ +E E E KK L+ E + R+ +L R+ S +++D+ K L N L ++ ++ +RS +EK+ + P L + + E+ K ++E + E+ A + + Y+SIA+ Sbjct: 13 KAEKDLWKRIEARLTEDNKNLMDERSRLNKLVTDLQNLQNERELAESETRRRLQTRTESIETELNETKKRLEHEVDESRKASLRREYEEGQSRTRIDDLVKSLGNVREELVAAKTVRDELKGRVEEMRIELRSAEEKVTALQPRPTPRAQAPQPEDNEQATGEEATELPAEQRLALEISELKRDLELARNELEAARQQVEHYRSIAQ 219
BLAST of GR407566 vs. TAIR peptide
Match: AT1G79280.1 (| Symbols: NUA, AtTPR | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2093) HSP 1 Score: 187.963 bits (476), Expect = 3.166e-48 Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VSVLK EKE+LSNAEKRASDEV LS+RV+RLQATL T+QS KQEE+ K+L+REWAEAKKELQEER N R DR+QT+ +++ QVE+M KEL NA+ ++ +LS ++ +RS+D K ++MD+ G +S E+ EL+TAKEEIEKL+ EV ++K+HMLQYKSIA+V Sbjct: 786 VSVLKQEKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAERRKQEEHIKQLQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKELANALKAVSVAESRASVAEARLSDLEKKIRSSDPKTLDMDS-GGIVSLSDKEMSIELRTAKEEIEKLRGEVESSKSHMLQYKSIAQV 977
BLAST of GR407566 vs. TAIR peptide
Match: AT1G79280.3 (| Symbols: NUA | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2094) HSP 1 Score: 178.333 bits (451), Expect = 2.509e-45 Identity = 97/187 (51.87%), Postives = 130/187 (69.52%), Query Frame = 2 Query: 20 EKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVAELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 +KE+LSNAEKRASDEV LS+RV+RLQATL T+QS KQEE+ K+L+REWAEAKKELQEER N R DR+QT+ +++ QVE+M KEL NA+ ++ +LS ++ +RS+D K ++MD+ G +S E+ EL+TAKEEIEKL+ EV ++K+HMLQYKSIA+V Sbjct: 793 KKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAERRKQEEHIKQLQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKELANALKAVSVAESRASVAEARLSDLEKKIRSSDPKTLDMDS-GGIVSLSDKEMSIELRTAKEEIEKLRGEVESSKSHMLQYKSIAQV 978
BLAST of GR407566 vs. TAIR peptide
Match: AT1G79280.2 (| Symbols: NUA | nuclear pore anchor | chr1:29819176-29832809 REVERSE LENGTH=2115) HSP 1 Score: 177.563 bits (449), Expect = 4.280e-45 Identity = 105/216 (48.61%), Postives = 136/216 (62.96%), Query Frame = 2 Query: 2 VSVLKNEKEVLSNAEKRASDEVRNLSERVHRLQATLGTIQSXXXXXXXXXXXXXXKQEEYTKKLEREWAEAKKELQEERENVRRLALDRDQTMKSSLRQVEDMSKELTNAMCSLXXXXXXXXXXXXKLSSIQNHMRSTDEKLVNMDAMSGPSLISSDEVVA-----------------------ELQTAKEEIEKLKEEVHANKAHMLQYKSIAEV 580 VSVLK EKE+LSNAEKRASDEV LS+RV+RLQATL T+QS KQEE+ K+L+REWAEAKKELQEER N R DR+QT+ +++ QVE+M KEL NA+ ++ +LS ++ +RS+D K ++MD SG + SD+ A EL+TAKEEIEKL+ EV ++K+HMLQYKSIA+V Sbjct: 786 VSVLKQEKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAERRKQEEHIKQLQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKELANALKAVSVAESRASVAEARLSDLEKKIRSSDPKTLDMD--SGGIVSLSDKEAALVIILDVVHKIQAGFRIGSAMSIELRTAKEEIEKLRGEVESSKSHMLQYKSIAQV 999 The following BLAST results are available for this feature:
BLAST of GR407566 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR407566 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR407566 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407566 ID=GR407566; Name=GR407566; organism=Cicer arietinum; type=EST; length=580bpback to top |