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EST Overview
Name | GR421096 |
Unique Name | GR421096 |
Type | EST |
Organism | Cicer arietinum (chickpea) |
Sequence length | 653 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003883 | Repetitive proline-rich cell wall protein repeat | PFAM | PF02095 | Extensin_1 | coord: 14..21 score: 0.047coord: 22..28 score: 0.22coord: 42..47 score: |
IPR003883 | Repetitive proline-rich cell wall protein repeat | PFAM | PF02095 | Extensin_1 | coord: 23..32 score: 0.0036coord: 33..42 score: 0.0018coord: 50..54 score: 4.2 |
IPR003883 | Repetitive proline-rich cell wall protein repeat | PFAM | PF02095 | Extensin_1 | coord: 41..50 score: 0.0062coord: 56..61 score: 2.2e+02coord: 68..72 score |
None | No IPR available | SEG | seg | seg | coord: 15..30 score |
None | No IPR available | SEG | seg | seg | coord: 20..41 score |
None | No IPR available | SEG | seg | seg | coord: 40..52 score |
Properties
Property Name | Value |
Singlet in analysis | Cicer arietinum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >GR421096 ID=GR421096; Name=GR421096; organism=Cicer arietinum; type=EST; length=653bp CTAATCATAAGTACAACATTCTTAATTTGGAAAAGCACCATTTTCCATTT TACACTTACATTCTTATCTTAACAATAGCATTGTAAACAAAGGATTTAAA TGAAAATGCCAATAATATATAATCCTATATATACCTCCTTGCTTCAAAAA TTATTTTTCACATTTTCTTAATATAACAAGTTTTAAAAACGTCGGCAGGA ATTGTCATCAGGATACCCTGGGTGGTGAGGTGGCTTCTCATATGGAGGAT ACCTGAGGTGGCCTGGGTAGGGAGGCCCGTAAATTCTCATATCCGGTGGT TTCTCAACTGGGGGCTTATAAACAGGGGGTTCTGTGGCTTGTATACCGGT CTTCTCAATTGAATTGAGGTTTCTCTGGAGGCTACAGGTGGTGGTTTGTA TACAGGTGGCTTCTCTACTGGTGGTTTGTAAATCTTTGTGGTGTGTAAAC TAACACAGGTGGTAATTCTCAGCTACTGGAGGCCGGTGCGGTGGTTCTTT GGTGGCTTTATTCTCAACTGGAGGTTTGTAAACTGGTGGCTTCTCTACCG GTGGCTTATACACAGGCGGTATATATTCGGTGGCACTCGGTTTCGCTATA TACTGAGGGCTCTCAGATGGTTCTGGAGGCCATTGCTACTGAGAACTCTT GTA back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: Molecular Function
Term | Definition |
GO:0005199 | structural constituent of cell wall |
Vocabulary: INTERPRO
Term | Definition |
IPR003883 | Pro_rich_cell_wall_rpt |
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