HO068019

EST Overview


Name	HO068019
Unique Name	HO068019
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	566

Libraries


Library Name	Type
LIBEST_026415 Chickpea drought stressed cDNA SSH library BULK2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO068019 vs. SwissProt
Match: HDAC6_HUMAN (Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.788e-18
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 2

Query:  218 PCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            PC  C    ENW+CLSC +V CGR++N HMLQH  ++ H + LS+ DLS WC+ C AY+  Q +L +++   +A+  KFGE  P
Sbjct: 1132 PCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKN---IAHQNKFGEDMP 1212

[Close]

BLAST of HO068019 vs. SwissProt
Match: HDA6_CAEEL (Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.814e-16
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 2

Query:  215 TPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            T C+ CQ   E W CL+C +  CGRFVN H + H   ++H +ALS +DLSVWC+ CD+Y+    ++  +S    A+  KFGE  P
Sbjct:  873 TACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKS---AAHESKFGETMP 954

[Close]

BLAST of HO068019 vs. SwissProt
Match: HDAC6_MOUSE (Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.921e-15
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 2

Query:  203 PIP------NTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            PIP      + PC  C    ENW+CL+C +V C R+VN HM+ H + + H + LS  DLS WC+ C AY+       L+ V   A+  KFGE  P
Sbjct: 1055 PIPAAGLDVSQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQAYVHQD---DLQDVKNAAHQNKFGEDMP 1146

[Close]

BLAST of HO068019 vs. SwissProt
Match: SIR2A_DICDI (NAD-dependent deacetylase sir2A OS=Dictyostelium discoideum GN=sir2A PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 2

Query:  215 TPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            T C+ C   +ENW+C++C  V C R VN H  +HF++T H ++ SFSD S WC++CD Y+
Sbjct:   32 TKCHACNDESENWICMTCGVVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYV 91

[Close]

BLAST of HO068019 vs. SwissProt
Match: UBP44_HUMAN (Ubiquitin carboxyl-terminal hydrolase 44 OS=Homo sapiens GN=USP44 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.135e-11
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 2

Query:  149 ARTSCHHLAYL--SSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            A  +C H+  L  + D + +      C  C      W CLSC  V CGR++  H L+HFQ+++H VAL  +++ V+C+ CD Y+
Sbjct:    3 AMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYV 86

[Close]

BLAST of HO068019 vs. SwissProt
Match: UP44B_XENLA (Ubiquitin carboxyl-terminal hydrolase 44-B OS=Xenopus laevis GN=usp44-b PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  221 CNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            C  C      W CLSC  V CGR++  H L+HFQD+ H +AL  ++L V+C+ CD Y+
Sbjct:   26 CVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYV 83

[Close]

BLAST of HO068019 vs. SwissProt
Match: UP44A_XENLA (Ubiquitin carboxyl-terminal hydrolase 44-A OS=Xenopus laevis GN=usp44-a PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  221 CNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            C  C      W CLSC  V CGR++  H L+HFQD+ H +AL  ++L V+C+ CD Y+
Sbjct:   26 CVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYV 83

[Close]

BLAST of HO068019 vs. SwissProt
Match: UBP44_XENTR (Ubiquitin carboxyl-terminal hydrolase 44 OS=Xenopus tropicalis GN=usp44 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  221 CNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            C  C      W CLSC  V CGR++  H L+HFQD+ H +AL  ++L V+C+ CD Y+
Sbjct:   26 CVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKHPLALEVNELYVFCYLCDDYV 83

[Close]

BLAST of HO068019 vs. SwissProt
Match: UBP44_AILME (Ubiquitin carboxyl-terminal hydrolase 44 OS=Ailuropoda melanoleuca GN=USP44 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 2

Query:  161 CHHLAYL--SSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            C H+  L  + D + +      C  C      W CLSC  V CGR++  H L+HFQ+++H VAL  +++ V+C+ CD Y+
Sbjct:    7 CKHIGQLRLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYV 86

[Close]

BLAST of HO068019 vs. SwissProt
Match: UBP44_DANRE (Ubiquitin carboxyl-terminal hydrolase 44 OS=Danio rerio GN=usp44 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.605e-11
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 2

Query:  221 CNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            C  C      W CLSC  V CGR++  H LQHF++ +H +AL  ++L V+C+ CD Y+
Sbjct:   26 CVDCNTTESVWACLSCSHVACGRYIEEHALQHFKEQHHPLALEVNELYVYCYLCDDYV 83

[Close]

BLAST of HO068019 vs. TrEMBL
Match: D7SXS2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037858001 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.235e-52
Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 2

Query:   86 ECLLSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPLGANQPPASGDDQAEA 517
            E L+ +E+F  ++G+ESGWV+ARTSC HLA LSSDL HIP P TPCNRC +P+ENWLCL CKEVLC RFVN+HML+H+Q  NH +ALS+SDLS+WCFSCDAYLDAQ ILQL  V+E AYILKFG+ PP        + D+QAEA
Sbjct:   13 EVLIEDEEF--LYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPF------PTTDNQAEA 148

[Close]

BLAST of HO068019 vs. TrEMBL
Match: B9SNC7_RICCO (Histone deacetylase hda2, putative OS=Ricinus communis GN=RCOM_0174810 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.235e-52
Identity = 94/128 (73.44%), Postives = 111/128 (86.72%), Query Frame = 2

Query:  101 EEDFDL--IHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPLGA 478
            EED +L  ++GSESGWV+A+TSC HL  LSSDL+HI  P+TPC+RCQHP+ENWLCLSCK+VLC RFVN+HMLQH+  T+H VALS+SDLSVWCF+CDAYLDAQVI+QLR V+E AYILKFGE PP  A
Sbjct:   20 EEDDELMTVYGSESGWVEAKTSCDHLGSLSSDLSHISTPDTPCHRCQHPSENWLCLSCKDVLCSRFVNKHMLQHYHQTHHCVALSYSDLSVWCFACDAYLDAQVIMQLRPVYETAYILKFGEAPPFRA 147

[Close]

BLAST of HO068019 vs. TrEMBL
Match: A9PBR2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1087330 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.132e-52
Identity = 89/123 (72.36%), Postives = 109/123 (88.62%), Query Frame = 2

Query:  101 EEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            E+D + ++G+ESGWV+ARTSC HLA LSSDL HIP P+TPCNRCQHP+ENWLCLSCK+VLC RFVN+HMLQHF  T+H +ALS+SDLS+WCF+CD+YLDA+VI+QL+ V E A+ILKFGE PP
Sbjct:   18 EDDENDMYGAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNRCQHPSENWLCLSCKDVLCSRFVNKHMLQHFHQTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFGEAPP 140

[Close]

BLAST of HO068019 vs. TrEMBL
Match: Q67Y26_ARATH (MRNA, , clone: RAFL25-17-M10 OS=Arabidopsis thaliana GN=At2g14830 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.411e-48
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 2

Query:   95 LSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPL 472
            +++E  D I G+ SGWV+AR +C HL  LS DL H+P P+TPC+RCQ+P ENWLCL CKEVLC RFVNRHML H Q T H +ALS+SDLSVWCF C+AYLDAQ+ILQLR +H+ AYILKFGE PPL
Sbjct:   18 VADETQDWILGAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCSRCQNPVENWLCLCCKEVLCSRFVNRHMLTHHQQTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPIHQAAYILKFGEAPPL 143

[Close]

BLAST of HO068019 vs. TrEMBL
Match: Q8GUY9_ARATH (Putative uncharacterized protein F26C24.3 (Fragment) OS=Arabidopsis thaliana GN=F26C24.3 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.371e-48
Identity = 85/126 (67.46%), Postives = 101/126 (80.16%), Query Frame = 2

Query:   95 LSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPL 472
            +++E  D I G+ SGWV+AR +C HL  LS DL H+P P+TPC+RCQ+P ENWLCL CKEVLC RFVNRHML H Q T H +ALS+SDLSVWCF C+ YLDAQ+ILQLR +H+ AYILKFGE PPL
Sbjct:   12 VADETQDWILGAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCSRCQNPVENWLCLCCKEVLCSRFVNRHMLMHHQQTGHCLALSYSDLSVWCFCCETYLDAQIILQLRPIHQAAYILKFGEAPPL 137

[Close]

BLAST of HO068019 vs. TrEMBL
Match: C6SX04_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.323e-46
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 2

Query:  122 HGSESGWVQARTSCHHLAY-LSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTN--HSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPL 472
            +GSESGWV AR+ C HLA  LS DL  IP P+TPC  CQHPTENWLCLSCK+VLC RFVN+HML H +DTN  H VALSFSDLSVWCFSCDAYLD Q+I QLR +H++AYILKFG+PPP+
Sbjct:   16 YGSESGWVDARSWCDHLASSLSEDLGQIPGPDTPCQTCQHPTENWLCLSCKQVLCSRFVNKHMLHHSRDTNLTHCVALSFSDLSVWCFSCDAYLDPQLIPQLRPLHQLAYILKFGQPPPI 135

[Close]

BLAST of HO068019 vs. TrEMBL
Match: B9GDC7_ORYSJ (Os12g0508266 protein OS=Oryza sativa subsp. japonica GN=Os12g0508266 PE=4 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.788e-43
Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 2

Query:  107 DFDLIHGSESGWVQARTSCHHL----AYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            DFDL  G+ +GWV+ARTSC HL    A  + DL  +P P++PC+RC HP ENWLCL CK+VLC RF+N+HML H+QDT H +ALSFSDLS+WCF+CD+YLD Q IL+LR V+EVA+++KFG+ PP
Sbjct:   43 DFDLA-GAAAGWVEARTSCPHLPAMPAASADDLARVPPPDSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHYQDTGHCLALSFSDLSIWCFACDSYLDVQSILELRPVYEVAHLMKFGQRPP 166

[Close]

BLAST of HO068019 vs. TrEMBL
Match: B8BM33_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38470 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.159e-42
Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 2

Query:  107 DFDLIHGSESGWVQARTSCHHL----AYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            DFDL  G+ +GWV+ARTSC HL    A  + DL  +P P++PC+RC HP ENWLCL CK+VLC RF+N+HML H+QDT H +ALSFSDLSVWCF+CD+YLD Q IL+LR V+EVA+++KF + PP
Sbjct:   43 DFDLA-GAAAGWVEARTSCPHLPAMPAASADDLARVPPPDSPCSRCHHPAENWLCLICKDVLCSRFINKHMLYHYQDTGHCLALSFSDLSVWCFACDSYLDVQSILELRPVYEVAHLMKFRQRPP 166

[Close]

BLAST of HO068019 vs. TrEMBL
Match: B4FWF5_MAIZE (Histone deacetylase 6 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.977e-42
Identity = 76/139 (54.68%), Postives = 102/139 (73.38%), Query Frame = 2

Query:  107 DFDLIHGSESGWVQARTSCHHLAYL----SSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPLGANQPPASGDDQA 511
            D   ++G+ +GWV+ARTSC H+  +    + DL  +P P++PC+RC HP ENWLC  CK+VLC RF+N+HML H Q+T H +ALSFSDLSVWCFSCD+YLD Q IL+LR V+EVA++LKFG+ PP  +     SG  ++
Sbjct:   41 DLGDLYGAAAGWVEARTSCPHIGTMPPAGADDLARVPSPDSPCSRCNHPAENWLCFICKDVLCSRFINKHMLCHHQETGHCLALSFSDLSVWCFSCDSYLDVQAILELRPVYEVAHLLKFGQRPPFRSLDVQDSGTGES 179

[Close]

BLAST of HO068019 vs. TrEMBL
Match: C5YP27_SORBI (Putative uncharacterized protein Sb08g016307 (Fragment) OS=Sorghum bicolor GN=Sb08g016307 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.372e-42
Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 2

Query:  107 DFDLIHGSESGWVQARTSCHHLAYLS----SDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPP 469
            D   ++G+ +GWV ART+C HL  +      DL  +P P++PC+RC HP ENWLCL CK+VLC RF+N+HML H Q+T H +ALSFSDLSVWCFSCD+YLD Q IL+LR V+EVA++LKFGE PP
Sbjct:    4 DLGDLYGAAAGWVAARTTCPHLGTMPPAGPDDLARVPPPDSPCSRCHHPAENWLCLICKDVLCSRFINKHMLCHHQETGHCLALSFSDLSVWCFSCDSYLDVQAILELRPVYEVAHLLKFGERPP 128

[Close]

BLAST of HO068019 vs. TAIR peptide
Match: AT2G14830.2 (| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:6362524-6363893 FORWARD LENGTH=146)

HSP 1 Score: 195.667 bits (496), Expect = 1.461e-50
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 2

Query:   95 LSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNRCQHPTENWLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYLDAQVILQLRSVHEVAYILKFGEPPPL 472
            +++E  D I G+ SGWV+AR +C HL  LS DL H+P P+TPC+RCQ+P ENWLCL CKEVLC RFVNRHML H Q T H +ALS+SDLSVWCF C+AYLDAQ+ILQLR +H+ AYILKFGE PPL
Sbjct:   18 VADETQDWILGAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCSRCQNPVENWLCLCCKEVLCSRFVNRHMLMHHQQTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPIHQAAYILKFGEAPPL 143

[Close]

BLAST of HO068019 vs. TAIR peptide
Match: AT2G14830.1 (| Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:6362524-6365818 FORWARD LENGTH=454)

HSP 1 Score: 56.225 bits (134), Expect = 1.384e-8
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 2

Query:   95 LSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTPCNR 229
            +++E  D I G+ SGWV+AR +C HL  LS DL H+P P+TPC+R
Sbjct:   18 VADETQDWILGAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCSR 62

[Close]

BLAST of HO068019 vs. TAIR peptide
Match: AT2G26000.2 (| Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger) family protein | chr2:11082403-11085137 FORWARD LENGTH=479)

HSP 1 Score: 51.6026 bits (122), Expect = 3.408e-7
Identity = 33/118 (27.97%), Postives = 55/118 (46.61%), Query Frame = 2

Query:   80 QPECLLSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTP-CNRCQHPTEN------------WLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            QP C +  E  D     ++G +   T C+H ++  S +++ P  + P C  CQ   EN            W+C+ C  V CGR+   H  +H+++T H  +L      VW ++ D Y+
Sbjct:  164 QPTCPVCLERLD----QDTGGILT-TMCNH-SFHCSCISNWPDSSCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELETQRVWDYAGDNYV 275

[Close]

BLAST of HO068019 vs. TAIR peptide
Match: AT2G26000.1 (| Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger) family protein | chr2:11082403-11085137 FORWARD LENGTH=461)

HSP 1 Score: 51.6026 bits (122), Expect = 3.408e-7
Identity = 33/118 (27.97%), Postives = 55/118 (46.61%), Query Frame = 2

Query:   80 QPECLLSEEDFDLIHGSESGWVQARTSCHHLAYLSSDLTHIPIPNTP-CNRCQHPTEN------------WLCLSCKEVLCGRFVNRHMLQHFQDTNHSVALSFSDLSVWCFSCDAYL 394
            QP C +  E  D     ++G +   T C+H ++  S +++ P  + P C  CQ   EN            W+C+ C  V CGR+   H  +H+++T H  +L      VW ++ D Y+
Sbjct:  164 QPTCPVCLERLD----QDTGGILT-TMCNH-SFHCSCISNWPDSSCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELETQRVWDYAGDNYV 275

The following BLAST results are available for this feature:

BLAST of HO068019 vs. SwissProt
BLAST of HO068019 vs. TrEMBL
BLAST of HO068019 vs. TAIR peptide

BLAST of HO068019 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
HDAC6_HUMAN	2.788e-18	46.43	Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=...	[more]
HDA6_CAEEL	5.814e-16	43.53	Histone deacetylase 6 OS=Caenorhabditis elegans GN...	[more]
HDAC6_MOUSE	4.921e-15	41.05	Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=...	[more]
SIR2A_DICDI	5.441e-14	46.67	NAD-dependent deacetylase sir2A OS=Dictyostelium d...	[more]
UBP44_HUMAN	1.135e-11	35.71	Ubiquitin carboxyl-terminal hydrolase 44 OS=Homo s...	[more]
UP44B_XENLA	3.301e-11	44.83	Ubiquitin carboxyl-terminal hydrolase 44-B OS=Xeno...	[more]
UP44A_XENLA	3.301e-11	44.83	Ubiquitin carboxyl-terminal hydrolase 44-A OS=Xeno...	[more]
UBP44_XENTR	3.301e-11	44.83	Ubiquitin carboxyl-terminal hydrolase 44 OS=Xenopu...	[more]
UBP44_AILME	3.301e-11	36.25	Ubiquitin carboxyl-terminal hydrolase 44 OS=Ailuro...	[more]
UBP44_DANRE	9.605e-11	43.10	Ubiquitin carboxyl-terminal hydrolase 44 OS=Danio ...	[more]

BLAST of HO068019 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SXS2_VITVI	1.235e-52	66.67	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SNC7_RICCO	1.235e-52	73.44	Histone deacetylase hda2, putative OS=Ricinus comm...	[more]
A9PBR2_POPTR	6.132e-52	72.36	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q67Y26_ARATH	2.411e-48	68.25	MRNA, , clone: RAFL25-17-M10 OS=Arabidopsis thalia...	[more]
Q8GUY9_ARATH	5.371e-48	67.46	Putative uncharacterized protein F26C24.3 (Fragmen...	[more]
C6SX04_SOYBN	1.323e-46	73.33	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9GDC7_ORYSJ	1.788e-43	62.40	Os12g0508266 protein OS=Oryza sativa subsp. japoni...	[more]
B8BM33_ORYSI	1.159e-42	62.40	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B4FWF5_MAIZE	1.977e-42	54.68	Histone deacetylase 6 OS=Zea mays PE=2 SV=1	[more]
C5YP27_SORBI	3.372e-42	60.80	Putative uncharacterized protein Sb08g016307 (Frag...	[more]

BLAST of HO068019 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G14830.2	1.461e-50	68.25	\| Symbols: \| Regulator of Vps4 activity in the MV...	[more]
AT2G14830.1	1.384e-8	53.33	\| Symbols: \| Regulator of Vps4 activity in the MV...	[more]
AT2G26000.2	3.408e-7	27.97	\| Symbols: BRIZ2 \| zinc finger (C3HC4-type RING fi...	[more]
AT2G26000.1	3.408e-7	27.97	\| Symbols: BRIZ2 \| zinc finger (C3HC4-type RING fi...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase superfamily	PANTHER	PTHR10625	HISTONE DEACETYLASE	coord: 57..115 score: 4.3
IPR001607	Zinc finger, UBP-type	PFAM	PF02148	zf-UBP	coord: 57..115 score: 4.8
IPR001607	Zinc finger, UBP-type	SMART	SM00290	no description	coord: 56..105 score: 1.6
IPR001607	Zinc finger, UBP-type	PROFILE	PS50271	ZF_UBP	coord: 55..116 score: 17
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 34..124 score: 1.2
None	No IPR available	PANTHER	PTHR10625:SF24	HISTONE DEACETYLASE HDA2	coord: 57..115 score: 4.3
None	No IPR available	SEG	seg	seg	coord: 5..9 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO068019 ID=HO068019; Name=HO068019; organism=Cicer arietinum; type=EST; length=566bp
ATCCTAGTTTGGTGCGCAGTGGCAGTGAGCGAATAGGTTGGCATGGTTGT
GAATTGTGATGGCTTCATCTTCTTCTTCTCAACCGGAATGTTTATTATCT
GAAGAAGATTTCGACTTAATCCATGGCTCTGAATCTGGTTGGGTCCAAGC
TCGAACTTCATGCCATCATCTCGCTTACTTATCCTCTGATCTTACCCACA
TTCCAATCCCTAATACTCCCTGCAACAGGTGCCAACACCCAACTGAAAAC
TGGCTTTGTTTGTCGTGTAAGGAAGTGCTATGTGGCCGTTTTGTGAACAG
GCATATGCTCCAGCATTTTCAGGATACTAATCACAGTGTTGCCCTCAGTT
TCAGTGATCTATCAGTATGGTGCTTCTCTTGCGACGCTTACTTGGATGCT
CAAGTTATTCTGCAATTACGTTCTGTTCATGAAGTCGCTTACATATTGAA
ATTTGGTGAGCCTCCACCGCTTGGAGCAAATCAACCTCCTGCTTCTGGAG
ATGACCAGGCTGAAGCCTGAAGGTTTGTCTAGGAGTTGACCATGGTTTAT
TATCTGAATATCATGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000286	His_deacetylse
IPR001607	Znf_UBP
IPR013083	Znf_RING/FYVE/PHD

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