GE213103

EST Overview
NameGE213103
Unique NameGE213103
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length501
Libraries
Library NameType
LIBEST_023772 Wilt resistant chickpea leave library (JG 315)cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GE213103 vs. SwissProt
Match: RS281_ARATH (40S ribosomal protein S28-1 OS=Arabidopsis thaliana GN=RPS28A PE=2 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 2.977e-10
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 37.7354 bits (86), Expect = 2.977e-10
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = -1
Query:  250 DQNRHIMRNVKGPVREGDI 306
            D +R+IMRNVKGPVREGDI
Sbjct:   32 DSDRYIMRNVKGPVREGDI 50          
BLAST of GE213103 vs. SwissProt
Match: RS282_ARATH (40S ribosomal protein S28-2 OS=Arabidopsis thaliana GN=RPS28C PE=2 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 8.460e-10
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 36.1946 bits (82), Expect = 8.460e-10
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -1
Query:  250 DQNRHIMRNVKGPVREGDI 306
            D +R IMRNVKGPVREGD+
Sbjct:   32 DSDRFIMRNVKGPVREGDV 50          
BLAST of GE213103 vs. SwissProt
Match: RS28_MAIZE (40S ribosomal protein S28 OS=Zea mays GN=RPS28 PE=3 SV=1)

HSP 1 Score: 42.3578 bits (98), Expect = 1.098e-9
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + K AVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DTQVKLAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 40.4318 bits (93), Expect = 1.098e-9
Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPV EGDI
Sbjct:   31 LDDQNRLIMRNVKGPVCEGDI 51          
BLAST of GE213103 vs. SwissProt
Match: RS28_ICTPU (40S ribosomal protein S28 OS=Ictalurus punctatus GN=rps28 PE=3 SV=1)

HSP 1 Score: 41.2022 bits (95), Expect = 2.661e-7
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = -1
Query:  250 EVLDDQNRHIMRNVKGPVREGDI 318
            E +DD NR I+RNVKGPVREGD+
Sbjct:   33 EFMDDSNRSIIRNVKGPVREGDV 55          

HSP 2 Score: 33.4982 bits (75), Expect = 2.661e-7
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            K A V KV GRTG +GQ TQVRV F
Sbjct:   10 KLARVTKVLGRTGSQGQCTQVRVEF 34          
BLAST of GE213103 vs. SwissProt
Match: RS28_DANRE (40S ribosomal protein S28 OS=Danio rerio GN=rps28 PE=3 SV=1)

HSP 1 Score: 41.2022 bits (95), Expect = 2.661e-7
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = -1
Query:  250 EVLDDQNRHIMRNVKGPVREGDI 318
            E +DD NR I+RNVKGPVREGD+
Sbjct:   33 EFMDDSNRSIIRNVKGPVREGDV 55          

HSP 2 Score: 33.4982 bits (75), Expect = 2.661e-7
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            K A V KV GRTG +GQ TQVRV F
Sbjct:   10 KLARVTKVLGRTGSQGQCTQVRVEF 34          
BLAST of GE213103 vs. SwissProt
Match: RS28_KLUMA (40S ribosomal protein S28 OS=Kluyveromyces marxianus GN=RPS28 PE=3 SV=1)

HSP 1 Score: 37.7354 bits (86), Expect = 9.767e-7
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = -1
Query:  250 EVLDDQNRHIMRNVKGPVREGDI 318
            E L+D  R I+RNVKGPVREGDI
Sbjct:   31 EFLEDTTRTIVRNVKGPVREGDI 53          

HSP 2 Score: 35.039 bits (79), Expect = 9.767e-7
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = -2
Query:  312 AVVVKVYGRTGFRGQVTQVRVRF 380
            A V+KV GRTG RG VTQVRV F
Sbjct:   10 AKVIKVLGRTGSRGGVTQVRVEF 32          
BLAST of GE213103 vs. SwissProt
Match: RS28_KLULA (40S ribosomal protein S28 OS=Kluyveromyces lactis GN=RPS28 PE=3 SV=1)

HSP 1 Score: 37.7354 bits (86), Expect = 9.767e-7
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = -1
Query:  250 EVLDDQNRHIMRNVKGPVREGDI 318
            E L+D  R I+RNVKGPVREGDI
Sbjct:   31 EFLEDTTRTIVRNVKGPVREGDI 53          

HSP 2 Score: 35.039 bits (79), Expect = 9.767e-7
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = -2
Query:  312 AVVVKVYGRTGFRGQVTQVRVRF 380
            A V+KV GRTG RG VTQVRV F
Sbjct:   10 AKVIKVLGRTGSRGGVTQVRVEF 32          
BLAST of GE213103 vs. TrEMBL
Match: Q2HWC2_MEDTR (Ribosomal protein S28e OS=Medicago truncatula GN=MtrDRAFT_AC147482g43v2 PE=4 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 1.933e-12
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            E + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 ESQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 47.7506 bits (112), Expect = 1.933e-12
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNRHIMRNVKGPVREGDI
Sbjct:   31 LDDQNRHIMRNVKGPVREGDI 51          
BLAST of GE213103 vs. TrEMBL
Match: C6SZ18_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 5.487e-12
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNRHIMRNVKGPVREGDI
Sbjct:   31 LDDQNRHIMRNVKGPVREGDI 51          

HSP 2 Score: 46.595 bits (109), Expect = 5.487e-12
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            E + KHA+VVKV GRTG RGQVTQVRV+F
Sbjct:    2 ESQVKHALVVKVMGRTGSRGQVTQVRVKF 30          
BLAST of GE213103 vs. TrEMBL
Match: B9S469_RICCO (Ribosomal protein S28, putative OS=Ricinus communis GN=RCOM_0037190 PE=4 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 5.822e-11
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 43.8986 bits (102), Expect = 5.822e-11
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGD+
Sbjct:   31 LDDQNRFIMRNVKGPVREGDV 51          
BLAST of GE213103 vs. TrEMBL
Match: D7TI81_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033420001 PE=4 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 5.822e-11
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            E   KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:   48 ESGVKHAVVVKVMGRTGSRGQVTQVRVKF 76          

HSP 2 Score: 44.2838 bits (103), Expect = 5.822e-11
Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGDI
Sbjct:   77 LDDQNRFIMRNVKGPVREGDI 97          
BLAST of GE213103 vs. TrEMBL
Match: Q8LK53_HELAN (Ribosomal protein small subunit 28 OS=Helianthus annuus GN=SRPS28 PE=4 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 7.563e-11
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            E + KHAVVVKV GR+G RGQVTQVRV+F
Sbjct:    2 ESQIKHAVVVKVMGRSGSRGQVTQVRVKF 30          

HSP 2 Score: 43.8986 bits (102), Expect = 7.563e-11
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGD+
Sbjct:   31 LDDQNRFIMRNVKGPVREGDV 51          
BLAST of GE213103 vs. TrEMBL
Match: Q9ZNS5_PRUPE (Ribosomal protein S28 OS=Prunus persica GN=rps28.1 PE=4 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 7.563e-11
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    6 KHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 44.2838 bits (103), Expect = 7.563e-11
Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGDI
Sbjct:   31 LDDQNRFIMRNVKGPVREGDI 51          
BLAST of GE213103 vs. TrEMBL
Match: A5B3G5_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_038369 PE=4 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 7.563e-11
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    3 KHAVVVKVMGRTGSRGQVTQVRVKF 27          

HSP 2 Score: 44.2838 bits (103), Expect = 7.563e-11
Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGDI
Sbjct:   28 LDDQNRFIMRNVKGPVREGDI 48          
BLAST of GE213103 vs. TrEMBL
Match: A9P8N1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_725361 PE=4 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 9.826e-11
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVK+ GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKIMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 43.5134 bits (101), Expect = 9.826e-11
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            +DDQNR IMRNVKGPVREGDI
Sbjct:   31 IDDQNRFIMRNVKGPVREGDI 51          
BLAST of GE213103 vs. TrEMBL
Match: Q6RJY5_CAPAN (28 kDa small subunit ribosomal protein OS=Capsicum annuum PE=4 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 9.826e-11
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            KHAVVVK+ GRTG RGQVTQVRV+F
Sbjct:    6 KHAVVVKIMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 44.2838 bits (103), Expect = 9.826e-11
Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            LDDQNR IMRNVKGPVREGDI
Sbjct:   31 LDDQNRFIMRNVKGPVREGDI 51          
BLAST of GE213103 vs. TrEMBL
Match: Q9ZRW5_PRUPE (Ribosomal protein S28 OS=Prunus persica GN=rps28.2 PE=4 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 4.721e-10
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = -2
Query:  312 KHAVVVKVYGRTGFRGQVTQVRVRF 386
            KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    6 KHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 41.5874 bits (96), Expect = 4.721e-10
Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = -1
Query:  250 LDDQNRHIMRNVKGPVREGDI 312
            L DQNR IMRNVKGPVREGDI
Sbjct:   31 LGDQNRFIMRNVKGPVREGDI 51          
BLAST of GE213103 vs. TAIR peptide
Match: AT5G03850.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:1028542-1028736 REVERSE LENGTH=64)

HSP 1 Score: 46.9802 bits (110), Expect = 3.280e-11
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 37.7354 bits (86), Expect = 3.280e-11
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = -1
Query:  250 DQNRHIMRNVKGPVREGDI 306
            D +R+IMRNVKGPVREGDI
Sbjct:   32 DSDRYIMRNVKGPVREGDI 50          
BLAST of GE213103 vs. TAIR peptide
Match: AT3G10090.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr3:3108960-3109154 REVERSE LENGTH=64)

HSP 1 Score: 46.9802 bits (110), Expect = 3.280e-11
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 37.7354 bits (86), Expect = 3.280e-11
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = -1
Query:  250 DQNRHIMRNVKGPVREGDI 306
            D +R+IMRNVKGPVREGDI
Sbjct:   32 DSDRYIMRNVKGPVREGDI 50          
BLAST of GE213103 vs. TAIR peptide
Match: AT5G64140.1 (| Symbols: RPS28 | ribosomal protein S28 | chr5:25667529-25667723 REVERSE LENGTH=64)

HSP 1 Score: 46.9802 bits (110), Expect = 9.323e-11
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  312 ECRFKHAVVVKVYGRTGFRGQVTQVRVRF 398
            + + KHAVVVKV GRTG RGQVTQVRV+F
Sbjct:    2 DSQIKHAVVVKVMGRTGSRGQVTQVRVKF 30          

HSP 2 Score: 36.1946 bits (82), Expect = 9.323e-11
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -1
Query:  250 DQNRHIMRNVKGPVREGDI 306
            D +R IMRNVKGPVREGD+
Sbjct:   32 DSDRFIMRNVKGPVREGDV 50          
The following BLAST results are available for this feature:
BLAST of GE213103 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
RS281_ARATH2.977e-1075.8640S ribosomal protein S28-1 OS=Arabidopsis thalian... [more]
RS282_ARATH8.460e-1075.8640S ribosomal protein S28-2 OS=Arabidopsis thalian... [more]
RS28_MAIZE1.098e-972.4140S ribosomal protein S28 OS=Zea mays GN=RPS28 PE=... [more]
RS28_ICTPU2.661e-773.9140S ribosomal protein S28 OS=Ictalurus punctatus G... [more]
RS28_DANRE2.661e-773.9140S ribosomal protein S28 OS=Danio rerio GN=rps28 ... [more]
RS28_KLUMA9.767e-773.9140S ribosomal protein S28 OS=Kluyveromyces marxian... [more]
RS28_KLULA9.767e-773.9140S ribosomal protein S28 OS=Kluyveromyces lactis ... [more]
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BLAST of GE213103 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HWC2_MEDTR1.933e-1279.31Ribosomal protein S28e OS=Medicago truncatula GN=M... [more]
C6SZ18_SOYBN5.487e-12100.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9S469_RICCO5.822e-1175.86Ribosomal protein S28, putative OS=Ricinus communi... [more]
D7TI81_VITVI5.822e-1179.31Whole genome shotgun sequence of line PN40024, sca... [more]
Q8LK53_HELAN7.563e-1175.86Ribosomal protein small subunit 28 OS=Helianthus a... [more]
Q9ZNS5_PRUPE7.563e-1188.00Ribosomal protein S28 OS=Prunus persica GN=rps28.1... [more]
A5B3G5_VITVI7.563e-1188.00Putative uncharacterized protein (Fragment) OS=Vit... [more]
A9P8N1_POPTR9.826e-1172.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q6RJY5_CAPAN9.826e-1184.0028 kDa small subunit ribosomal protein OS=Capsicum... [more]
Q9ZRW5_PRUPE4.721e-1088.00Ribosomal protein S28 OS=Prunus persica GN=rps28.2... [more]
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BLAST of GE213103 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G03850.13.280e-1175.86| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT3G10090.13.280e-1175.86| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT5G64140.19.323e-1175.86| Symbols: RPS28 | ribosomal protein S28 | chr5:25... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 7..23
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GE213103 ID=GE213103; Name=GE213103; organism=Cicer arietinum; type=EST; length=501bp
CGTAAGTATTTGCAATAAATATGTCAAAATAAGAAATAAATATGTTTCAA
TACAGCAATGAAGGCATGCAAAACATAATACAGAGTGATTGAACGATTTT
ACTCGAAGAACTCAACAAAACAAAAGCATAGATGATAATATAATTAAACA
CAGATTTATCATAAACAAACAATAGTTAATTAAAAGTGGACCCCAATTAC
TCTTCTAGCGAAGTCTTCTAGCTTCTCTCTCAGACTCAAGCAAGGTGAGA
ATGTCACCTTCTCTAACTGGTCCTTTAACATTCCTCATGATGTGACGATT
CTGATCATCCAAAACCTCACTCTAACTTGAGTAACCTGTCCTCTAAATCC
AGTACGACCATAAACCTTCACTACAACAGCATGCTTAAATCGGCACTCCT
CATGAAAAATAAATGGAAAAGGGAAGTATTAGATTCGACTCCCCCACCGT
AATGGCCCTCTGCGTTGAAACACTGGTAAACGGATCCGGGCCCCTCACTG
G
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