GR399404
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR399404 vs. SwissProt
Match: VPS26_ARATH (Vacuolar protein sorting-associated protein 26 OS=Arabidopsis thaliana GN=At4g27690 PE=2 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 5.142e-7 Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRL+E + Sbjct: 273 YLNLVLVDEEDRRYFKQQEITLYRLKEDA 301
BLAST of GR399404 vs. TrEMBL
Match: B9N808_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_746045 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.527e-7 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRLQESS Sbjct: 273 YLNLVLVDEEDRRYFKQQEITIYRLQESS 301
BLAST of GR399404 vs. TrEMBL
Match: B4FT16_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.527e-7 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQES 84 +LNLVLVDEEDRRYFKQQEITMYRLQES Sbjct: 273 YLNLVLVDEEDRRYFKQQEITMYRLQES 300
BLAST of GR399404 vs. TrEMBL
Match: A9PCL0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819142 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.527e-7 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRLQESS Sbjct: 273 YLNLVLVDEEDRRYFKQQEITIYRLQESS 301
BLAST of GR399404 vs. TAIR peptide
Match: AT5G53530.1 (| Symbols: VPS26A | vacuolar protein sorting 26A | chr5:21746275-21748156 REVERSE LENGTH=302) HSP 1 Score: 53.9138 bits (128), Expect = 5.716e-8 Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRL+E + Sbjct: 273 YLNLVLVDEEDRRYFKQQEITLYRLKEET 301
BLAST of GR399404 vs. TAIR peptide
Match: AT4G27690.2 (| Symbols: VPS26B | vacuolar protein sorting 26B | chr4:13824324-13826235 FORWARD LENGTH=275) HSP 1 Score: 53.9138 bits (128), Expect = 5.716e-8 Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRL+E + Sbjct: 245 YLNLVLVDEEDRRYFKQQEITLYRLKEDA 273
BLAST of GR399404 vs. TAIR peptide
Match: AT4G27690.1 (| Symbols: VPS26B | vacuolar protein sorting 26B | chr4:13824019-13826235 FORWARD LENGTH=303) HSP 1 Score: 53.9138 bits (128), Expect = 5.716e-8 Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 FLNLVLVDEEDRRYFKQQEITMYRLQESS 87 +LNLVLVDEEDRRYFKQQEIT+YRL+E + Sbjct: 273 YLNLVLVDEEDRRYFKQQEITLYRLKEDA 301 The following BLAST results are available for this feature:
BLAST of GR399404 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR399404 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 3
BLAST of GR399404 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR399404 ID=GR399404; Name=GR399404; organism=Cicer arietinum; type=EST; length=513bpback to top |