GR399592
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR399592 vs. SwissProt
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.229e-45 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 TLL+GDKSHPQ+ +I EK D++S E++KSG+ P + L DVEEQ++EQ+L GHSEKLAVV GLLNT G PLQVIKNLRIC DCHAVIK IS REI++RDTNRFHHFKDG+CSC DFW Sbjct: 639 TLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of GR399592 vs. SwissProt
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.740e-36 Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 +GD+ H + KEI K+S IK GY+P TNTVLQD+EE +KEQ L HSE+LA+ GL++T PG PL++ KNLR+C DCH V K+IS++ R+I +RD NRFHHF DG CSC DFW Sbjct: 514 AGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of GR399592 vs. SwissProt
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.578e-36 Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 SGD+SHPQ+KEI EK +KL +++++GY P T L DVEE+++E ++ HSE+LA+ GL+ T PG +++IKNLR+C DCH V K+IS++ R I VRD NRFHHFKDGVCSC D+W Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of GR399592 vs. SwissProt
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.167e-35 Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHF-KDGVCSCEDFW 368 + L+GD+SHP +I K + LS +K GY P T+ VLQD++++ KE +L HSE+LA+ GL+ T G PL +IKNLR+C DCH VIK+I+++E REI VRD+NRFHHF DGVCSC DFW Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
BLAST of GR399592 vs. SwissProt
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.167e-35 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 3 Query: 15 GDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 GDKSHPQ K I EK D++ +I+K GY+P T +V DVE ++KE L HSEKLA+ GL+ PG P++V+KNLR CDDCHA K +S L + EI +RD NRFHHF++GVCSC++FW Sbjct: 467 GDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
BLAST of GR399592 vs. SwissProt
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.745e-34 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 18 DKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 D +HP+ EI K+ EIKK GY+P T +VL D+EE+ KEQIL HSEKLA+ GL++T L+++KNLR+C+DCH IK IS+L REI VRDT RFHHFKDG CSC D+W Sbjct: 670 DGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of GR399592 vs. SwissProt
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.662e-33 Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 9 LSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 ++GD SHPQ +++ + L ++K GY+P T+ VL +VEE +KE +LCGHSEKLA+ G+LNTSPG ++V KNLR+C+DCH K IS++ REI +RD RFH FK+G CSC D+W Sbjct: 771 VAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of GR399592 vs. SwissProt
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.171e-33 Identity = 62/117 (52.99%), Postives = 90/117 (76.92%), Query Frame = 3 Query: 18 DKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 D SHP+ KEI ++S +++ +GY P+T VL ++EE+DKE +L HSEK+A GL++TSPG+P++++KNLRIC+DCH+ IK+IS++ R+I VRD RFHHF+DG CSC D+W Sbjct: 530 DDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of GR399592 vs. SwissProt
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.171e-33 Identity = 62/122 (50.82%), Postives = 89/122 (72.95%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 T GD+ HP+ EI ++L + +KK+GY+ T+ VL DVEE++KE+++ HSE+LAV G++ S G+P++VIKNLR+C+DCH IK ++R+ R I +RD NRFHHFKDG CSC D+W Sbjct: 660 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of GR399592 vs. SwissProt
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.316e-33 Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQD-KEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 SGD S PQ + I + + L + K GY+P V Q++EE++ K +++CGHSE+LA+ GLLNT PG PLQV+KNLR+C DCH V K+IS++ REI VRD NRFH FKDG CSC+D W Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
BLAST of GR399592 vs. TrEMBL
Match: B9GQU2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642949 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.837e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 3 Query: 6 LLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 LL+GD SHPQM +I+EK KL++E+KKSGY+P T+ VLQDVEEQDKEQILCGHSEKLAVVLGLLNT PG PLQVIKNLRIC DCHAVIK IS E REI+VRDTNRFH FK GVCSC D+W Sbjct: 596 LLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
BLAST of GR399592 vs. TrEMBL
Match: D7KIA6_ARALY (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889470 PE=4 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.412e-43 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 TLL+ DKSHPQ+ +I EK D++S E++KSG+ P + LQDVEEQ++EQ+L GHSEKLAVV GLLNT G PLQVIKNLRIC DCHAVIK IS REI++RDTNRFHHFKDG+CSC DFW Sbjct: 639 TLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of GR399592 vs. TrEMBL
Match: B8BEJ2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30872 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.553e-40 Identity = 80/121 (66.12%), Postives = 93/121 (76.86%), Query Frame = 3 Query: 6 LLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 LL+GD SHP M I EK +L+IE+++ G+ P T+ VL DVEEQDK IL HSEKLAV LGL++TS G PL+VIKNLRIC DCH +K IS E REIYVRDTNRFHHFKDG CSC D+W Sbjct: 2 LLAGDSSHPMMAAITEKLKQLTIEMRRLGFAPSTDYVLHDVEEQDKYDILSVHSEKLAVALGLISTSRGTPLRVIKNLRICGDCHEAMKFISSFEGREIYVRDTNRFHHFKDGKCSCADYW 122
BLAST of GR399592 vs. TrEMBL
Match: Q60EX3_ORYSJ (Os05g0370000 protein OS=Oryza sativa subsp. japonica GN=OJ1118_F06.2 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.472e-40 Identity = 79/121 (65.29%), Postives = 93/121 (76.86%), Query Frame = 3 Query: 6 LLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 LL+GD SHP M I EK L++E+++ G+ P T+ VL DVEEQ+K+ IL HSEKLAV LGL++TS G PLQVIKNLRIC DCH +K IS E REIYVRDTNRFHHFKDG CSC D+W Sbjct: 544 LLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664
BLAST of GR399592 vs. TrEMBL
Match: B9H1Y8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_800906 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.400e-37 Identity = 71/122 (58.20%), Postives = 93/122 (76.23%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 T L+GD SHP +I K ++LS ++K +GY P T+ V QDV+E+ KE IL HSE+LA+ GL+ T PG PLQ++KNLR+C DCH+VIK+IS LE R+I VRD+NRFHHFK G+CSC D+W Sbjct: 359 TFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
BLAST of GR399592 vs. TrEMBL
Match: A5AEL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035038 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.802e-37 Identity = 69/122 (56.56%), Postives = 94/122 (77.05%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 T L+GD+SHPQ K+I E+ D L ++K++GY+P T++ L DVEE+DKE L HSEKLA+ +LNT+PG P+++ KNLR+C DCH K+IS++ REI +RDTNRFHHF +GVCSC D+W Sbjct: 1546 TFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
BLAST of GR399592 vs. TrEMBL
Match: A2YZT8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30870 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.802e-37 Identity = 74/115 (64.35%), Postives = 88/115 (76.52%), Query Frame = 3 Query: 24 SHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 SHP M I EK L++E+++ G+ P T+ VL DVEEQ+K+ IL HSEKLAV LGL++TS G PL+VIKNLRIC DCH +K IS E REIYVRDTNRFHHFKDG CSC D+W Sbjct: 296 SHPMMAAITEKLKHLTMEMRRLGFAPNTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLRVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 410
BLAST of GR399592 vs. TrEMBL
Match: D7TCX8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_80.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036169001 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.280e-36 Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 + ++GD SHPQ I K ++LSI +K +GY P T VL DVEE+ KE IL HSE+LA+ GL+ T PG P+Q++KNLR+C DCH VIK+IS++E R+I VRD+NRFHHFK G CSC D+W Sbjct: 649 SFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
BLAST of GR399592 vs. TrEMBL
Match: A9TDA2_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169414 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.672e-36 Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 3 Query: 9 LSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 L D SHP+ KEI E DK+ +IK GY+P T VL++ +DKE +C HSEKLA+V GL++T PG P++V KNLR+C DCH K+IS++E REI VRD NRFHHFKDGVCSC D+W Sbjct: 584 LVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
BLAST of GR399592 vs. TrEMBL
Match: B9HA38_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_802442 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.184e-36 Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = 3 Query: 9 LSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 ++GDKSH Q KEI E D++ E+K++GY+P T VL D++++DKE L HSEKLA+ LLNT PG ++++KNLR+CDDCH+ K IS++ REI VRD NRFHHFK+G+CSC DFW Sbjct: 368 VAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
BLAST of GR399592 vs. TAIR peptide
Match: AT1G20230.1 (| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:7009570-7011852 FORWARD LENGTH=760) HSP 1 Score: 181.8 bits (460), Expect = 3.267e-46 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 TLL+GDKSHPQ+ +I EK D++S E++KSG+ P + L DVEEQ++EQ+L GHSEKLAVV GLLNT G PLQVIKNLRIC DCHAVIK IS REI++RDTNRFHHFKDG+CSC DFW Sbjct: 639 TLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of GR399592 vs. TAIR peptide
Match: AT4G37380.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17572040-17573938 REVERSE LENGTH=632) HSP 1 Score: 152.14 bits (383), Expect = 2.772e-37 Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 +GD+ H + KEI K+S IK GY+P TNTVLQD+EE +KEQ L HSE+LA+ GL++T PG PL++ KNLR+C DCH V K+IS++ R+I +RD NRFHHF DG CSC DFW Sbjct: 514 AGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of GR399592 vs. TAIR peptide
Match: AT4G30700.1 (| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:14962617-14964995 REVERSE LENGTH=792) HSP 1 Score: 151.754 bits (382), Expect = 3.621e-37 Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 SGD+SHPQ+KEI EK +KL +++++GY P T L DVEE+++E ++ HSE+LA+ GL+ T PG +++IKNLR+C DCH V K+IS++ R I VRD NRFHHFKDGVCSC D+W Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of GR399592 vs. TAIR peptide
Match: AT2G27610.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:11783927-11786533 REVERSE LENGTH=868) HSP 1 Score: 147.902 bits (372), Expect = 5.228e-36 Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHF-KDGVCSCEDFW 368 + L+GD+SHP +I K + LS +K GY P T+ VLQD++++ KE +L HSE+LA+ GL+ T G PL +IKNLR+C DCH VIK+I+++E REI VRD+NRFHHF DGVCSC DFW Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
BLAST of GR399592 vs. TAIR peptide
Match: AT2G01510.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:230752-232506 REVERSE LENGTH=584) HSP 1 Score: 147.902 bits (372), Expect = 5.228e-36 Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 3 Query: 15 GDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 GDKSHPQ K I EK D++ +I+K GY+P T +V DVE ++KE L HSEKLA+ GL+ PG P++V+KNLR CDDCHA K +S L + EI +RD NRFHHF++GVCSC++FW Sbjct: 467 GDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
BLAST of GR399592 vs. TAIR peptide
Match: AT2G22070.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:9383602-9385962 FORWARD LENGTH=786) HSP 1 Score: 143.665 bits (361), Expect = 9.860e-35 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 18 DKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 D +HP+ EI K+ EIKK GY+P T +VL D+EE+ KEQIL HSEKLA+ GL++T L+++KNLR+C+DCH IK IS+L REI VRDT RFHHFKDG CSC D+W Sbjct: 670 DGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of GR399592 vs. TAIR peptide
Match: AT3G57430.1 (| Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890) HSP 1 Score: 142.895 bits (359), Expect = 1.682e-34 Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 9 LSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 ++GD SHPQ +++ + L ++K GY+P T+ VL +VEE +KE +LCGHSEKLA+ G+LNTSPG ++V KNLR+C+DCH K IS++ REI +RD RFH FK+G CSC D+W Sbjct: 771 VAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of GR399592 vs. TAIR peptide
Match: AT5G48910.1 (| Symbols: LPA66 | Pentatricopeptide repeat (PPR) superfamily protein | chr5:19832969-19834909 REVERSE LENGTH=646) HSP 1 Score: 142.51 bits (358), Expect = 2.197e-34 Identity = 62/117 (52.99%), Postives = 90/117 (76.92%), Query Frame = 3 Query: 18 DKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 D SHP+ KEI ++S +++ +GY P+T VL ++EE+DKE +L HSEK+A GL++TSPG+P++++KNLRIC+DCH+ IK+IS++ R+I VRD RFHHF+DG CSC D+W Sbjct: 530 DDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of GR399592 vs. TAIR peptide
Match: AT4G02750.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:1221116-1223461 REVERSE LENGTH=781) HSP 1 Score: 142.51 bits (358), Expect = 2.197e-34 Identity = 62/122 (50.82%), Postives = 89/122 (72.95%), Query Frame = 3 Query: 3 TLLSGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 T GD+ HP+ EI ++L + +KK+GY+ T+ VL DVEE++KE+++ HSE+LAV G++ S G+P++VIKNLR+C+DCH IK ++R+ R I +RD NRFHHFKDG CSC D+W Sbjct: 660 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of GR399592 vs. TAIR peptide
Match: AT3G03580.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:860695-863343 REVERSE LENGTH=882) HSP 1 Score: 140.969 bits (354), Expect = 6.391e-34 Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 12 SGDKSHPQMKEILEKSDKLSIEIKKSGYLPMTNTVLQDVEEQD-KEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEAREIYVRDTNRFHHFKDGVCSCEDFW 368 SGD S PQ + I + + L + K GY+P V Q++EE++ K +++CGHSE+LA+ GLLNT PG PLQV+KNLR+C DCH V K+IS++ REI VRD NRFH FKDG CSC+D W Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882 The following BLAST results are available for this feature:
BLAST of GR399592 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR399592 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR399592 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR399592 ID=GR399592; Name=GR399592; organism=Cicer arietinum; type=EST; length=719bpback to top |