HO064306

EST Overview


Name	HO064306
Unique Name	HO064306
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	345

Libraries


Library Name	Type
LIBEST_026411 Chickpea drought stressed cDNA SSH library AR2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.604e-21
Identity = 46/56 (82.14%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  160 VGDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            V +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLKS++YRFDK+GNQWKERGAGT
Sbjct:   17 VNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGT 72

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.667e-21
Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLKS+LYRFDKD NQWKERGAGT
Sbjct:   20 EDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGT 73

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.961e-21
Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIV+L EVAV+TGEEDE+ ILDLKS+LYRFDKDG+QWKERGAGT
Sbjct:   22 EDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGT 75

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP2_HUMAN (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 9.130e-9
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1

Query:  160 VGDDEDTGAQVA---------PIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            VG+DED   +           PIV L EV V +GEEDEE +   +++LYR+D+D +QWKERG G
Sbjct: 2893 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVG 2956

HSP 2 Score: 57.3806 bits (137), Expect = 2.656e-8
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            GDD+D G    P+V L + + V TGEEDEE     +++L+RFD +  +WKERG G
Sbjct: 1163 GDDDDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIG 1217

HSP 3 Score: 55.0694 bits (131), Expect = 1.318e-7
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1

Query:  157 VVGDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            V  ++E  G    P+V L + V VS+GEE+E+ +   +++LYR+DKD  QWKERG G
Sbjct: 2299 VTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIG 2355

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP2_MOUSE (E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.192e-8
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1

Query:  163 GDDEDT----GAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            G DED          PIV L EV V +GEEDEE +   +++LYR+D+D +QWKERG G
Sbjct: 2728 GSDEDVVHNEDIHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIG 2785

HSP 2 Score: 56.9954 bits (136), Expect = 3.469e-8
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            GD+ED G    P+V L + + V TGEEDEE     +++L+RFD +  +WKERG G
Sbjct: 1157 GDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIG 1211

HSP 3 Score: 55.0694 bits (131), Expect = 1.318e-7
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1

Query:  157 VVGDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            V  ++E  G    P+V L + V VS+GEE+E+ +   +++LYR+DKD  QWKERG G
Sbjct: 2136 VTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIG 2192

[Close]

BLAST of HO064306 vs. SwissProt
Match: RBP2_BOVIN (E3 SUMO-protein ligase RanBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.557e-8
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1

Query:  151 TPVVGDDEDTGAQVA---------PIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            T  VG+DED   +           PIV L EV V +GEEDEE +   +++LYR+D++ +QWK+RG G
Sbjct:  751 TSKVGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDREASQWKDRGVG 817

HSP 2 Score: 56.6102 bits (135), Expect = 4.531e-8
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1

Query:  157 VVGDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            V  ++E  G    P+V L + V VS+GEE+E+ +   +++LYR+DKD  QWKERG G
Sbjct:  164 VTQEEERDGQHFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIG 220

[Close]

BLAST of HO064306 vs. SwissProt
Match: YRB1_YEAST (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae GN=YRB1 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.722e-7
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 1

Query:  163 GDD--EDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            GDD  E       P+V L +V V T EEDEE +  ++++L+RFD D  +WKERG G
Sbjct:   54 GDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTG 109

[Close]

BLAST of HO064306 vs. SwissProt
Match: RGPD8_HUMAN (RANBP2-like and GRIP domain-containing protein 8 OS=Homo sapiens GN=RGPD8 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 2.937e-7
Identity = 33/95 (34.74%), Postives = 48/95 (50.53%), Query Frame = 1

Query:   70 DPSGTNSNTNSLSVQIMADPXXXXXXXTPVVGDDEDT---------GAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            D S T SN +  S   ++            VG DE++         G    P+V L + V VS+GEE+E+ +   ++ +YR+DKD  QWKERG G
Sbjct: 1285 DESTTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIG 1379

[Close]

BLAST of HO064306 vs. SwissProt
Match: RGPD5_HUMAN (RANBP2-like and GRIP domain-containing protein 5/6 OS=Homo sapiens GN=RGPD5 PE=1 SV=3)

HSP 1 Score: 53.9138 bits (128), Expect = 2.937e-7
Identity = 33/95 (34.74%), Postives = 48/95 (50.53%), Query Frame = 1

Query:   70 DPSGTNSNTNSLSVQIMADPXXXXXXXTPVVGDDEDT---------GAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            D S T SN +  S   ++            VG DE++         G    P+V L + V VS+GEE+E+ +   ++ +YR+DKD  QWKERG G
Sbjct: 1285 DESTTGSNFSFKSALSLSKSPAKLNQSGTSVGTDEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIG 1379

[Close]

BLAST of HO064306 vs. SwissProt
Match: RGPD4_HUMAN (RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 2.937e-7
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1

Query:  157 VVGDDEDTGAQVAPIVKLVE-VAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAG 324
            V  ++E  G    P+V L + V VS+GEE+E+ +   ++ LYR+DKD  QWKERG G
Sbjct: 1324 VTQEEERDGQYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIG 1380

[Close]

BLAST of HO064306 vs. TrEMBL
Match: B9HND6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557663 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.006e-22
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            G+DEDTGAQVAPIVKL EVAVSTGEEDE+AILDLKS+LYRFDKDGNQWKERGAGT
Sbjct:   19 GEDEDTGAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGT 73

[Close]

BLAST of HO064306 vs. TrEMBL
Match: A9P8P1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1068650 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.006e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            GDDEDTGAQVAPIVKL EVAVSTGEEDE+ ILDLKS+LYRFDKDGNQWKERGAGT
Sbjct:   19 GDDEDTGAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGT 73

[Close]

BLAST of HO064306 vs. TrEMBL
Match: D7SJV1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024705001 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.133e-20
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 1

Query:  121 ADPXXXXXXXTPVVGDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DP            +DEDTGAQVAPIVKL EVAV+TGEEDE+A+LDLK++LYRFDKDGNQWKERGAG+
Sbjct:    4 SDPERREDEDAAAAAEDEDTGAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGS 72

[Close]

BLAST of HO064306 vs. TrEMBL
Match: Q1WWI2_ARATH (At5g58590 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.296e-20
Identity = 46/56 (82.14%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  160 VGDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            V +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLKS++YRFDK+GNQWKERGAGT
Sbjct:   17 VNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGT 72

[Close]

BLAST of HO064306 vs. TrEMBL
Match: Q10MW8_ORYSJ (Os03g0292800 protein OS=Oryza sativa subsp. japonica GN=Os03g0292800 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.304e-20
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            G+DEDTGAQVAPIVKL EVAV+TGEEDEE +LD+KS+LYRFDK+GNQWKERG GT
Sbjct:   20 GEDEDTGAQVAPIVKLEEVAVTTGEEDEEVLLDMKSKLYRFDKEGNQWKERGTGT 74

[Close]

BLAST of HO064306 vs. TrEMBL
Match: B8ALM1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11117 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.304e-20
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            G+DEDTGAQVAPIVKL EVAV+TGEEDEE +LD+KS+LYRFDK+GNQWKERG GT
Sbjct:   20 GEDEDTGAQVAPIVKLEEVAVTTGEEDEEVLLDMKSKLYRFDKEGNQWKERGTGT 74

[Close]

BLAST of HO064306 vs. TrEMBL
Match: B7FFC3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.304e-20
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 1

Query:  163 GDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            GD+EDTGAQ+API++L EVAVSTGEEDEEAILDLK++LYRFDK GNQWKERGAGT
Sbjct:   16 GDEEDTGAQIAPIIQLHEVAVSTGEEDEEAILDLKAKLYRFDKVGNQWKERGAGT 70

[Close]

BLAST of HO064306 vs. TrEMBL
Match: B9IGC7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1104394 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.622e-20
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIVKL EVAV+TGEEDEEAILDLK++LYRFDK+GNQWKERG GT
Sbjct:   32 EDEDTGAQVAPIVKLEEVAVTTGEEDEEAILDLKAKLYRFDKEGNQWKERGVGT 85

[Close]

BLAST of HO064306 vs. TrEMBL
Match: A9P8D0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.622e-20
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIVKL EVAV+TGEEDEEAILDLK++LYRFDK+GNQWKERG GT
Sbjct:   32 EDEDTGAQVAPIVKLEEVAVTTGEEDEEAILDLKAKLYRFDKEGNQWKERGVGT 85

[Close]

BLAST of HO064306 vs. TrEMBL
Match: D7MQF2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495982 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.342e-20
Identity = 45/56 (80.36%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  160 VGDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            V +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLK+++YRFDK+GNQWKERGAGT
Sbjct:   17 VNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKAKMYRFDKEGNQWKERGAGT 72

[Close]

BLAST of HO064306 vs. TAIR peptide
Match: AT5G58590.1 (| Symbols: RANBP1 | RAN binding protein 1 | chr5:23680319-23681714 REVERSE LENGTH=219)

HSP 1 Score: 101.293 bits (251), Expect = 1.276e-22
Identity = 46/56 (82.14%), Postives = 54/56 (96.43%), Query Frame = 1

Query:  160 VGDDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            V +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLKS++YRFDK+GNQWKERGAGT
Sbjct:   17 VNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGT 72

[Close]

BLAST of HO064306 vs. TAIR peptide
Match: AT1G07140.1 (| Symbols: SIRANBP | Pleckstrin homology (PH) domain superfamily protein | chr1:2192360-2193688 REVERSE LENGTH=228)

HSP 1 Score: 99.7525 bits (247), Expect = 3.713e-22
Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIV+L EVAV+TGEEDE+A+LDLKS+LYRFDKD NQWKERGAGT
Sbjct:   20 EDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGT 73

[Close]

BLAST of HO064306 vs. TAIR peptide
Match: AT2G30060.1 (| Symbols: | Pleckstrin homology (PH) domain superfamily protein | chr2:12827035-12828551 FORWARD LENGTH=217)

HSP 1 Score: 98.9821 bits (245), Expect = 6.333e-22
Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 1

Query:  166 DDEDTGAQVAPIVKLVEVAVSTGEEDEEAILDLKSRLYRFDKDGNQWKERGAGT 327
            +DEDTGAQVAPIV+L EVAV+TGEEDE+ ILDLKS+LYRFDKDG+QWKERGAGT
Sbjct:   22 EDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGT 75

The following BLAST results are available for this feature:

BLAST of HO064306 vs. SwissProt
BLAST of HO064306 vs. TrEMBL
BLAST of HO064306 vs. TAIR peptide

BLAST of HO064306 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBP1C_ARATH	1.604e-21	82.14	Ran-binding protein 1 homolog c OS=Arabidopsis tha...	[more]
RBP1A_ARATH	4.667e-21	85.19	Ran-binding protein 1 homolog a OS=Arabidopsis tha...	[more]
RBP1B_ARATH	7.961e-21	85.19	Ran-binding protein 1 homolog b OS=Arabidopsis tha...	[more]
RBP2_HUMAN	9.130e-9	46.88	E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=R...	[more]
RBP2_MOUSE	1.192e-8	50.00	E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=R...	[more]
RBP2_BOVIN	1.557e-8	43.28	E3 SUMO-protein ligase RanBP2 (Fragment) OS=Bos ta...	[more]
YRB1_YEAST	1.722e-7	46.43	Ran-specific GTPase-activating protein 1 OS=Saccha...	[more]
RGPD8_HUMAN	2.937e-7	34.74	RANBP2-like and GRIP domain-containing protein 8 O...	[more]
RGPD5_HUMAN	2.937e-7	34.74	RANBP2-like and GRIP domain-containing protein 5/6...	[more]
RGPD4_HUMAN	2.937e-7	45.61	RanBP2-like and GRIP domain-containing protein 4 O...	[more]

BLAST of HO064306 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HND6_POPTR	6.006e-22	92.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8P1_POPTR	6.006e-22	92.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SJV1_VITVI	1.133e-20	69.57	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q1WWI2_ARATH	3.296e-20	82.14	At5g58590 OS=Arabidopsis thaliana PE=2 SV=1	[more]
Q10MW8_ORYSJ	4.304e-20	83.64	Os03g0292800 protein OS=Oryza sativa subsp. japoni...	[more]
B8ALM1_ORYSI	4.304e-20	83.64	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B7FFC3_MEDTR	4.304e-20	85.45	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9IGC7_POPTR	5.622e-20	87.04	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8D0_POPTR	5.622e-20	87.04	Putative uncharacterized protein OS=Populus tricho...	[more]
D7MQF2_ARALY	7.342e-20	80.36	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of HO064306 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G58590.1	1.276e-22	82.14	\| Symbols: RANBP1 \| RAN binding protein 1 \| chr5:2...	[more]
AT1G07140.1	3.713e-22	85.19	\| Symbols: SIRANBP \| Pleckstrin homology (PH) doma...	[more]
AT2G30060.1	6.333e-22	85.19	\| Symbols: \| Pleckstrin homology (PH) domain supe...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding protein 1	PFAM	PF00638	Ran_BP1	coord: 75..109 score: 1.4
IPR000156	Ran binding protein 1	PROFILE	PS50196	RANBD1	coord: 63..108 score: 14
IPR011993	Pleckstrin homology-type	GENE3D	2.30.29.30	no description	coord: 65..109 score: 1.3
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 63..109 score: 1.2
None	No IPR available	PANTHER	PTHR23138:SF10	RAN BINDING PROTEIN	coord: 63..109 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 6..23 score: NAcoord: 44..50 score
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 64..109 score: 7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO064306 ID=HO064306; Name=HO064306; organism=Cicer arietinum; type=EST; length=345bp
CCGCATCCCTATATACAACAGCAACCTCCACTCTCACTCCCATTACTTCC
CTACTCCCAACACTCTCTAGACCCTAGCGGCACCAATTCCAATACAAACT
CTCTCTCTGTACAGATCATGGCCGATCCTGAGCACCACGAAGAGGAGGAG
ACACCAGTCGTCGGCGATGACGAAGATACCGGAGCTCAAGTCGCTCCCAT
CGTCAAACTAGTGGAGGTTGCCGTCTCAACCGGTGAAGAAGACGAAGAGG
CCATTCTAGATCTCAAATCGAGGCTTTACCGTTTCGACAAGGATGGAAAT
CAGTGGAAGGAGAGAGGTGCTGGTACCTCGGCCGCGACCACGCTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0046907	intracellular transport

Vocabulary: **INTERPRO**
Term	Definition
IPR000156	Ran_bind_dom
IPR011993	PH-like_dom_sf

Search form