GR394190

EST Overview
NameGR394190
Unique NameGR394190
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length338
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394190 vs. TrEMBL
Match: B3D9S6_BURM1 (Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=BMULJ_05091 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.096e-14
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 3
Query:   90 ERACSRSN*TRSQEKPLSFSL*LTVPQTDTGARDEYSKALERTQEKELGKLTP 248
            ER  SRSN    QEKPLSFSL +TVPQTDTG RDEYSKALERT+EKELGKL P
Sbjct:   38 ERLRSRSNWKWFQEKPLSFSLTMTVPQTDTGGRDEYSKALERTREKELGKLVP 90          
BLAST of GR394190 vs. TrEMBL
Match: D1RK09_LEGLO (Putative uncharacterized protein OS=Legionella longbeachae D-4968 GN=LLB_2711 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.397e-10
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = -2
Query:  131 INSRSHLFFAT-HSCSDVLITLLGHTFFRSYGVNLPSSFS*VLSSALEYSSRAPVSVCGTVNYKLKLSGF 337
            INSRSHL  A   S     +   G TF RSYG  LPSSF+ VLSSAL +S+  PVSVCGTV YKL L+ F
Sbjct:    4 INSRSHLVSAALFSSESKFLHRKGRTFSRSYGTILPSSFTRVLSSALVFSTCPPVSVCGTVLYKLWLAAF 73          
BLAST of GR394190 vs. TrEMBL
Match: D2YVG0_VIBMI (Putative uncharacterized protein OS=Vibrio mimicus VM573 GN=VMD_37440 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.131e-10
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = -2
Query:  125 INSRSHLFFATHSCSDVLITLLGH---TFFRSYGVNLPSSFS*VLSSALEYSSRAPVSVCGTVNYKLKLSGFSW 337
            +NS SHL  AT   S  +   L H   TF RSYG  LPSSF+ VLSSAL +S+R PVSV GT+ Y LKL GFSW
Sbjct:    8 LNSCSHLVSATLVSS--IREGLHHQERTFSRSYGTILPSSFTRVLSSALVFSTRPPVSVWGTIPYNLKLRGFSW 79          
BLAST of GR394190 vs. TrEMBL
Match: B9P8P2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_793758 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.740e-8
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3
Query:  159 TVPQTDTGARDEYSKALERTQEKELGKLTP 248
            TVPQTDTG RDEYSKALERT+EKELGKL P
Sbjct:   95 TVPQTDTGGRDEYSKALERTREKELGKLVP 124          

HSP 2 Score: 22.3274 bits (46), Expect = 4.740e-8
Identity = 14/32 (43.75%), Postives = 16/32 (50.00%), Query Frame = 2
Query:   53 RQIRPSYTEAADRASLLAK*LNEVPGKATKLQ 148
            RQIR   +         AK L  VP KA+KLQ
Sbjct:   60 RQIRARNSRMWGERPSAAKQLEVVPRKASKLQ 91          
BLAST of GR394190 vs. TrEMBL
Match: C9YEE8_9BURK (Putative uncharacterized protein OS=Curvibacter putative symbiont of Hydra magnipapillata GN=Csp_D29540 PE=4 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.021e-7
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = -3
Query:  202 GTPSSEVTVSICRVPSPEFSQAP 270
            GTPSSEVTVSICRVPSPEFSQAP
Sbjct:  134 GTPSSEVTVSICRVPSPEFSQAP 156          

HSP 2 Score: 29.261 bits (64), Expect = 1.021e-7
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = -1
Query:  306 NKQSQPPIFCN 338
            NKQSQPPIFCN
Sbjct:  110 NKQSQPPIFCN 120          
BLAST of GR394190 vs. TrEMBL
Match: C1FNC0_CLOBJ (Putative uncharacterized protein OS=Clostridium botulinum (strain Kyoto / Type A2) GN=CLM_0051 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.426e-7
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = -2
Query:  125 HTFFRSYGVNLPSSFS*VLSSALEYSSRAPVSVCGTVNYKLKLSGFSW 268
            H F RSYGVNLPSS + +L  AL +S   PVSVCGT  Y L   GFSW
Sbjct:   19 HPFSRSYGVNLPSSLTAILPMALGFSPHLPVSVCGTGTYSLD-RGFSW 65          
BLAST of GR394190 vs. TrEMBL
Match: B1QFN7_CLOBO (Putative uncharacterized protein OS=Clostridium botulinum NCTC 2916 GN=CBN_0041 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.426e-7
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = -2
Query:  125 HTFFRSYGVNLPSSFS*VLSSALEYSSRAPVSVCGTVNYKLKLSGFSW 268
            H F RSYGVNLPSS + +L  AL +S   PVSVCGT  Y L   GFSW
Sbjct:   19 HPFSRSYGVNLPSSLTAILPMALGFSPHLPVSVCGTGTYSLD-RGFSW 65          
The following BLAST results are available for this feature:
BLAST of GR394190 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B3D9S6_BURM16.096e-1479.25Putative uncharacterized protein OS=Burkholderia m... [more]
D1RK09_LEGLO2.397e-1058.57Putative uncharacterized protein OS=Legionella lon... [more]
D2YVG0_VIBMI3.131e-1058.11Putative uncharacterized protein OS=Vibrio mimicus... [more]
B9P8P2_POPTR4.740e-890.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C9YEE8_9BURK1.021e-7100.00Putative uncharacterized protein OS=Curvibacter pu... [more]
C1FNC0_CLOBJ9.426e-760.42Putative uncharacterized protein OS=Clostridium bo... [more]
B1QFN7_CLOBO9.426e-760.42Putative uncharacterized protein OS=Clostridium bo... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 38..52
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394190 ID=GR394190; Name=GR394190; organism=Cicer arietinum; type=EST; length=338bp
GTGGTATCAACGCAGAGTGATGTCCCGGTTTAGGCAGATGTAGGCGATGG
GTAGGCAAATCCGCCCGTCATATACCGAGGCTGCCGATCGAGCGAGCTTG
CTCGCGAAGTAACTGAACGAGGTCCCAGGAAAAGCCACTAAGCTTCAGCT
TGTAATTGACCGTACCGCAAACCGACACTGGTGCGCGAGATGAGTATTCT
AAGGCGCTTGAGAGAACTCAGGAGAAGGAACTCGGCAAATTGACACCGTA
ACTTCGGAAGAAGGTGTGCCCTAGTAGTGTGATGAGAACATCTGAGCACG
AATGGGTTGCAAAAAATAGGTGGCTGCGACTGTTTATT
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