HO063966
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063966 vs. SwissProt
Match: HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.756e-23 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFS +N+N I + L R R + +A++ ++P RGYVSC VGCP+EG + P+KVAYV K LY+MGC EIS GDTIG+GT Sbjct: 261 IFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGT 345
BLAST of HO063966 vs. SwissProt
Match: HMGCL_BOVIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus GN=HMGCL PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.647e-22 Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+ F+K N+N I + L R +I A+R+ I RGYVSC +GCP EGKI+PAKVA V K LY MGC EIS GDTIGVGT Sbjct: 126 IFGAASELFTKKNINCSIDESLQRFDEILKAARAAGISVRGYVSCVLGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGT 210
BLAST of HO063966 vs. SwissProt
Match: HMGC2_MOUSE (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Mus musculus GN=Hmgcll1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.146e-21 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK N+N I + + R +++ S++R IP RGYVSC +GCP EG I P KV V+K LY MGC EIS GDTIGVGT Sbjct: 141 VFGAASESFSKKNINCSIEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDTIGVGT 225
BLAST of HO063966 vs. SwissProt
Match: HMGCL_RAT (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus GN=Hmgcl PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.660e-21 Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = -2 Query: 2 TIFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 259 +IF AS+ F++ N+N I + R + A+R+ +I RGYVSC +GCP EGK++PAKVA VAK LY MGC EIS GDTIGVGT Sbjct: 125 SIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGT 210
BLAST of HO063966 vs. SwissProt
Match: HMGC2_DANRE (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Danio rerio GN=hmgcll1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.781e-21 Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS++FS+ N+N I + L R + SA++ IP RGYVSC +GCP EG++ P++V VAK L+E+GC E+S GDTIGVGT Sbjct: 136 VFGSASETFSRKNINCSIEESLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQVKPSQVTKVAKRLFELGCYEVSLGDTIGVGT 220
BLAST of HO063966 vs. SwissProt
Match: HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase OS=Gallus gallus GN=HMGCL PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.155e-21 Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = -2 Query: 2 TIFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 259 +IF AS+ F+K N+N I + L R ++ +A+R+ +IP RGYVSC +GCP EG I+ AKVA V+K +Y MGC EIS GD IG+GT Sbjct: 98 SIFGAASELFTKKNINCSIEESLERFSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGIGT 183
BLAST of HO063966 vs. SwissProt
Match: HMGCL_PONAB (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii GN=HMGCL PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.065e-20 Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+ F+K N+N I + R I A++S I RGYVSC +GCP EGKI+PAKVA V K LY MGC EIS GDTIGVGT Sbjct: 126 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGT 210
BLAST of HO063966 vs. SwissProt
Match: HMGC2_HUMAN (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Homo sapiens GN=HMGCLL1 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 1.065e-20 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = -2 Query: 2 TIFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 259 ++F AS+SFSK N+N I + + + ++ ++R IP RGYVSC +GCP EG I P KV V+K LY MGC EIS GDTIGVGT Sbjct: 170 SVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDTIGVGT 255
BLAST of HO063966 vs. SwissProt
Match: HMGCL_MACFA (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca fascicularis GN=HMGCL PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.099e-20 Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = -2 Query: 2 TIFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 259 +IF AS+ F+K N+N I + R I A++S I RGYVSC +GCP EGKI+PAKVA V K Y MGC EIS GDTIGVGT Sbjct: 125 SIFGAASELFTKKNVNCSIEESFQRFDAILKAAQSANISVRGYVSCVLGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGT 210
BLAST of HO063966 vs. SwissProt
Match: HMGCL_HUMAN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens GN=HMGCL PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.099e-20 Identity = 49/85 (57.65%), Postives = 57/85 (67.06%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+ F+K N+N I + R I A++S I RGYVSC +GCP EGKI+PAKVA V K Y MGC EIS GDTIGVGT Sbjct: 126 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGT 210
BLAST of HO063966 vs. TrEMBL
Match: A2Q4I7_MEDTR (Pyruvate carboxyltransferase OS=Medicago truncatula GN=MtrDRAFT_AC157502g12v2 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.207e-30 Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +FP AS+SFSKANLN GI D L R RDI SASRS IP RGY+SC VGCPLEG+IAP KVAYVAKSLYEMG SEIS GDTIGVGT Sbjct: 195 VFPAASESFSKANLNCGIEDNLARCRDIASASRSLTIPVRGYISCVVGCPLEGRIAPVKVAYVAKSLYEMGISEISLGDTIGVGT 279
BLAST of HO063966 vs. TrEMBL
Match: D7TQS1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025756001 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.527e-25 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFSK+N+N I D LTR RD+ A+R +IP RGY+SC VGCPLEG ++P+KV YV K LY+MGC EIS GDTIGVGT Sbjct: 192 IFASASESFSKSNINCSIEDSLTRYRDVALAARKLSIPVRGYISCVVGCPLEGVVSPSKVTYVGKELYDMGCYEISLGDTIGVGT 276
BLAST of HO063966 vs. TrEMBL
Match: Q2PF06_TRIPR (Putative hydroxymethylglutaryl-CoA lyase (Fragment) OS=Trifolium pratense PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.995e-25 Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+N+N I + L R R +TSA+++ +IP RGYVSC VGCP+EG ++P+KVAYVAK LY+MGC EIS GDTIGVGT Sbjct: 227 VFASASESFSKSNINCSIEESLARYRAVTSAAKALSIPVRGYVSCVVGCPVEGSVSPSKVAYVAKELYDMGCFEISLGDTIGVGT 311
BLAST of HO063966 vs. TrEMBL
Match: D7T1A1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037343001 PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.914e-24 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFSK+N+N I + LTR R + A++ +IP RGYVSC VGCP+EG I+P+KVAYVAK LY+MGC EIS GDTIGV T Sbjct: 226 IFASASESFSKSNINCSIEESLTRYRAVALAAKKLSIPVRGYVSCVVGCPVEGAISPSKVAYVAKELYDMGCFEISLGDTIGVAT 310
BLAST of HO063966 vs. TrEMBL
Match: B9RU86_RICCO (Hydroxymethylglutaryl-CoA lyase, putative OS=Ricinus communis GN=RCOM_1635180 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.417e-24 Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+N+N I D L R D+ A+ +IP RGY+SC VGCP+EG I+P+KVAYVAK L +MGCSEIS GDTIGVGT Sbjct: 171 VFASASESFSKSNINCSIEDSLVRYSDVALAASKLSIPMRGYISCVVGCPIEGMISPSKVAYVAKRLCDMGCSEISLGDTIGVGT 255
BLAST of HO063966 vs. TrEMBL
Match: Q2RAU5_ORYSJ (Hydroxymethylglutaryl-CoA lyase, mitochondrial, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g04210 PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.381e-24 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+NLN I + L R RD+ ++++ + RGYVSC VGCP+EG I P+KVAYVAK LY+MGCSEIS GDTIGVGT Sbjct: 186 VFASASESFSKSNLNCTIKESLVRYRDVVTSAKKHGMRIRGYVSCVVGCPVEGTIHPSKVAYVAKELYDMGCSEISLGDTIGVGT 270
BLAST of HO063966 vs. TrEMBL
Match: A2ZB72_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35017 PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.381e-24 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+NLN I + L R RD+ ++++ + RGYVSC VGCP+EG I P+KVAYVAK LY+MGCSEIS GDTIGVGT Sbjct: 186 VFASASESFSKSNLNCTIKESLVRYRDVVTSAKKHGMRIRGYVSCVVGCPVEGTIHPSKVAYVAKELYDMGCSEISLGDTIGVGT 270
BLAST of HO063966 vs. TrEMBL
Match: B8LMI6_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.095e-23 Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+N+N I + L R +DI +A++ +P RGYVSC VGCP+EG I+P+ VAYVAK LY+MGC EIS GDTIGVGT Sbjct: 257 VFASASESFSKSNINCTIEESLCRYKDILNAAKRLCVPVRGYVSCVVGCPVEGPISPSSVAYVAKELYDMGCYEISLGDTIGVGT 341
BLAST of HO063966 vs. TrEMBL
Match: Q2QY32_ORYSJ (Hydroxymethylglutaryl-CoA lyase, mitochondrial, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g04020 PE=4 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.430e-23 Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+NLN I + L R D+ ++++ I RGYVSC VGCP+EG I P+KVAYVAK LY+MGCSEIS GDTIGVGT Sbjct: 186 VFASASESFSKSNLNCTIKESLVRYHDVVTSAKKHGIRIRGYVSCVVGCPVEGTIHPSKVAYVAKELYDMGCSEISLGDTIGVGT 270
BLAST of HO063966 vs. TrEMBL
Match: Q0IQA3_ORYSJ (Os12g0134000 protein OS=Oryza sativa subsp. japonica GN=Os12g0134000 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.430e-23 Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 +F AS+SFSK+NLN I + L R D+ ++++ I RGYVSC VGCP+EG I P+KVAYVAK LY+MGCSEIS GDTIGVGT Sbjct: 176 VFASASESFSKSNLNCTIKESLVRYHDVVTSAKKHGIRIRGYVSCVVGCPVEGTIHPSKVAYVAKELYDMGCSEISLGDTIGVGT 260
BLAST of HO063966 vs. TAIR peptide
Match: AT2G26800.2 (| Symbols: | Aldolase superfamily protein | chr2:11429192-11432290 REVERSE LENGTH=468) HSP 1 Score: 107.842 bits (268), Expect = 1.373e-24 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFS +N+N I + L R R + +A++ ++P RGYVSC VGCP+EG + P+KVAYV K LY+MGC EIS GDTIG+GT Sbjct: 261 IFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGT 345
BLAST of HO063966 vs. TAIR peptide
Match: AT2G26800.3 (| Symbols: | Aldolase superfamily protein | chr2:11429856-11432290 REVERSE LENGTH=355) HSP 1 Score: 107.842 bits (268), Expect = 1.373e-24 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFS +N+N I + L R R + +A++ ++P RGYVSC VGCP+EG + P+KVAYV K LY+MGC EIS GDTIG+GT Sbjct: 261 IFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGT 345
BLAST of HO063966 vs. TAIR peptide
Match: AT2G26800.1 (| Symbols: | Aldolase superfamily protein | chr2:11429192-11432185 REVERSE LENGTH=433) HSP 1 Score: 107.842 bits (268), Expect = 1.373e-24 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = -2 Query: 2 IFPXASKSFSKANLNXGIXDXLTRXRDITSASRSXAIPXRGYVSCXVGCPLEGKIAPAKVAYVAKSLYEMGCSEISXGDTIGVGT 256 IF AS+SFS +N+N I + L R R + +A++ ++P RGYVSC VGCP+EG + P+KVAYV K LY+MGC EIS GDTIG+GT Sbjct: 226 IFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGT 310 The following BLAST results are available for this feature:
BLAST of HO063966 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of HO063966 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO063966 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063966 ID=HO063966; Name=HO063966; organism=Cicer arietinum; type=EST; length=266bpback to top |