HO067849
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067849 vs. SwissProt
Match: PUB62_ARATH (U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 3.403e-8 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G+LM DAMILPCGH+FG GGI+ V +MKACCT Sbjct: 191 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223
BLAST of HO067849 vs. TrEMBL
Match: D7T4C2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032672001 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LMDDAMILPCGHSFGGGG+QHVI+MKAC T Sbjct: 212 TGALMDDAMILPCGHSFGGGGMQHVIKMKACST 244
BLAST of HO067849 vs. TrEMBL
Match: A5BR43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024206 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LMDDAMILPCGHSFGGGG+QHVI+MKAC T Sbjct: 269 TGALMDDAMILPCGHSFGGGGMQHVIKMKACST 301
BLAST of HO067849 vs. TrEMBL
Match: B9S4G2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690100 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.248e-8 Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LMDDAMILPCGHSFG GGIQH+IR KAC T Sbjct: 222 TGALMDDAMILPCGHSFGVGGIQHIIRTKACYT 254
BLAST of HO067849 vs. TrEMBL
Match: B9IQ60_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1108254 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.248e-8 Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKAC 484 +G LMDDAMILPCGHSFG GG+QHVIRMK C Sbjct: 54 TGALMDDAMILPCGHSFGAGGMQHVIRMKVC 84
BLAST of HO067849 vs. TrEMBL
Match: D7LYC1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487314 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.240e-7 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G+LM DAMILPCGH+FG GGI+ V +MKACCT Sbjct: 193 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 225
BLAST of HO067849 vs. TAIR peptide
Match: AT5G05230.1 (| Symbols: | RING/U-box superfamily protein | chr5:1551593-1553543 FORWARD LENGTH=363) HSP 1 Score: 57.7658 bits (138), Expect = 3.755e-9 Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G+LM DAMILPCGH+FG GGI+ V +MKACCT Sbjct: 191 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.3 (| Symbols: | RING/U-box superfamily protein | chr2:16961685-16963198 REVERSE LENGTH=314) HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7 Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LM+DA ILPCGHSFG GG++ V +MKAC T Sbjct: 211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.2 (| Symbols: | RING/U-box superfamily protein | chr2:16961488-16963198 REVERSE LENGTH=352) HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7 Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LM+DA ILPCGHSFG GG++ V +MKAC T Sbjct: 211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.1 (| Symbols: | RING/U-box superfamily protein | chr2:16961323-16963198 REVERSE LENGTH=383) HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7 Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2 Query: 392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490 +G LM+DA ILPCGHSFG GG++ V +MKAC T Sbjct: 211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243 The following BLAST results are available for this feature:
BLAST of HO067849 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of HO067849 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of HO067849 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067849 ID=HO067849; Name=HO067849; organism=Cicer arietinum; type=EST; length=504bpback to top |