HO067849

EST Overview
NameHO067849
Unique NameHO067849
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length504
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO067849 vs. SwissProt
Match: PUB62_ARATH (U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.403e-8
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G+LM DAMILPCGH+FG GGI+ V +MKACCT
Sbjct:  191 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223          
BLAST of HO067849 vs. TrEMBL
Match: D7T4C2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032672001 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LMDDAMILPCGHSFGGGG+QHVI+MKAC T
Sbjct:  212 TGALMDDAMILPCGHSFGGGGMQHVIKMKACST 244          
BLAST of HO067849 vs. TrEMBL
Match: A5BR43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024206 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LMDDAMILPCGHSFGGGG+QHVI+MKAC T
Sbjct:  269 TGALMDDAMILPCGHSFGGGGMQHVIKMKACST 301          
BLAST of HO067849 vs. TrEMBL
Match: B9S4G2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690100 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.248e-8
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LMDDAMILPCGHSFG GGIQH+IR KAC T
Sbjct:  222 TGALMDDAMILPCGHSFGVGGIQHIIRTKACYT 254          
BLAST of HO067849 vs. TrEMBL
Match: B9IQ60_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1108254 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.248e-8
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKAC 484
            +G LMDDAMILPCGHSFG GG+QHVIRMK C
Sbjct:   54 TGALMDDAMILPCGHSFGAGGMQHVIRMKVC 84          
BLAST of HO067849 vs. TrEMBL
Match: D7LYC1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487314 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.240e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G+LM DAMILPCGH+FG GGI+ V +MKACCT
Sbjct:  193 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 225          
BLAST of HO067849 vs. TAIR peptide
Match: AT5G05230.1 (| Symbols: | RING/U-box superfamily protein | chr5:1551593-1553543 FORWARD LENGTH=363)

HSP 1 Score: 57.7658 bits (138), Expect = 3.755e-9
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G+LM DAMILPCGH+FG GGI+ V +MKACCT
Sbjct:  191 TGSLMADAMILPCGHTFGAGGIEQVKQMKACCT 223          
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.3 (| Symbols: | RING/U-box superfamily protein | chr2:16961685-16963198 REVERSE LENGTH=314)

HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LM+DA ILPCGHSFG GG++ V +MKAC T
Sbjct:  211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243          
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.2 (| Symbols: | RING/U-box superfamily protein | chr2:16961488-16963198 REVERSE LENGTH=352)

HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LM+DA ILPCGHSFG GG++ V +MKAC T
Sbjct:  211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243          
BLAST of HO067849 vs. TAIR peptide
Match: AT2G40640.1 (| Symbols: | RING/U-box superfamily protein | chr2:16961323-16963198 REVERSE LENGTH=383)

HSP 1 Score: 52.373 bits (124), Expect = 1.578e-7
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 2
Query:  392 SGTLMDDAMILPCGHSFGGGGIQHVIRMKACCT 490
            +G LM+DA ILPCGHSFG GG++ V +MKAC T
Sbjct:  211 TGALMNDATILPCGHSFGAGGLKEVKKMKACFT 243          
The following BLAST results are available for this feature:
BLAST of HO067849 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PUB62_ARATH3.403e-872.73U-box domain-containing protein 62 OS=Arabidopsis ... [more]
back to top
BLAST of HO067849 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
D7T4C2_VITVI1.192e-984.85Whole genome shotgun sequence of line PN40024, sca... [more]
A5BR43_VITVI1.192e-984.85Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S4G2_RICCO2.248e-881.82Putative uncharacterized protein OS=Ricinus commun... [more]
B9IQ60_POPTR2.248e-883.87Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LYC1_ARALY4.240e-772.73Putative uncharacterized protein OS=Arabidopsis ly... [more]
back to top
BLAST of HO067849 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G05230.13.755e-972.73| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G40640.31.578e-766.67| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G40640.21.578e-766.67| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G40640.11.578e-766.67| Symbols: | RING/U-box superfamily protein | chr... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 49..60
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067849 ID=HO067849; Name=HO067849; organism=Cicer arietinum; type=EST; length=504bp
AAGGGTTGCCTTCTGTGCAGAAAGTTATGGTGGATGATAATGGTTGTGGG
TTTAGTGGAAGAAAGGATGCCATGTATTTGAGCGAGTCAGGGGAGTCATT
GAGGGCAATTCTTTCCGATCCTGTTACGAACTTCTATAATGATGCATAAA
AAGAAGTTTGAGGCCAGATATTTACAAAACCATATATTCCAACTTATTGA
GACAGTCTATTTGGCATTAGTTGATCACTCATGCAGAACAGCAAAATCTT
ATTTGGTGTTATTACTTCCCTCTCCTTATTTGCAAGCATAGGGATTATAT
TAGTTTCACCAGCTGATATCTTGTATGCTTGTTGTGCTGCTTCTTCATAC
CTACACTTTTAATATTTGATTTTTTCATCTTTTGAAAATACAGTGGAACT
CTTATGGATGATGCAATGATATTACCTTGTGGACATTCATTTGGTGGAGG
CGGAATACAGCATGTTATTAGAATGAAAGCTTGTTGTACCTCGGCCGCGA
CCAC
back to top