GR398079

EST Overview
NameGR398079
Unique NameGR398079
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length309
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR398079 vs. TrEMBL
Match: A5ATJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040170 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.754e-9
Identity = 28/37 (75.68%), Postives = 37/37 (100.00%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSS 113
            IT+HS++DVMQGENLDVF+DALLL++EMDAIA+F+S+
Sbjct: 1505 ITHHSVNDVMQGENLDVFIDALLLQQEMDAIASFSST 1541          
BLAST of GR398079 vs. TrEMBL
Match: Q3E6W0_ARATH (At2g47020 OS=Arabidopsis thaliana GN=At2g47020 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8
Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116
            IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++
Sbjct:  376 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 413          
BLAST of GR398079 vs. TrEMBL
Match: O80723_ARATH (Putative peptide chain release factor OS=Arabidopsis thaliana GN=At2g47020 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8
Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116
            IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++
Sbjct:  358 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 395          
BLAST of GR398079 vs. TrEMBL
Match: D7U2V2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028263001 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.848e-8
Identity = 27/34 (79.41%), Postives = 34/34 (100.00%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATF 104
            IT+HS++DVMQGENLDVF+DALLL++EMDAIA+F
Sbjct:  348 ITHHSVNDVMQGENLDVFIDALLLQQEMDAIASF 381          
BLAST of GR398079 vs. TrEMBL
Match: B9I9C3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774637 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.564e-8
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110
            IT+HSI+DVMQGE+LDVF+DALLL++EMDAIA+F S
Sbjct:  321 ITHHSINDVMQGESLDVFIDALLLQQEMDAIASFGS 356          
BLAST of GR398079 vs. TrEMBL
Match: Q6I547_ORYSJ (Putative peptide chain release factor OS=Oryza sativa subsp. japonica GN=OSJNBa0055E23.6 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110
            IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S
Sbjct:  315 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 350          
BLAST of GR398079 vs. TrEMBL
Match: Q0DJH9_ORYSJ (Os05g0277300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os05g0277300 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110
            IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S
Sbjct:  314 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 349          
BLAST of GR398079 vs. TrEMBL
Match: C5YZJ8_SORBI (Putative uncharacterized protein Sb09g002890 OS=Sorghum bicolor GN=Sb09g002890 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATF 104
            IT+HSI DVM+GE+LDVFVDALLL+EEMDAIA+F
Sbjct:  381 ITHHSIADVMEGESLDVFVDALLLQEEMDAIASF 414          
BLAST of GR398079 vs. TrEMBL
Match: B9FNM2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17885 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110
            IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S
Sbjct:  333 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 368          
BLAST of GR398079 vs. TrEMBL
Match: B8AW28_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19275 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110
            IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S
Sbjct:  333 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 368          
BLAST of GR398079 vs. TAIR peptide
Match: AT2G47020.1 (| Symbols: | Peptide chain release factor 1 | chr2:19320090-19322279 REVERSE LENGTH=413)

HSP 1 Score: 61.6178 bits (148), Expect = 1.124e-10
Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3
Query:    3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116
            IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++
Sbjct:  376 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 413          
The following BLAST results are available for this feature:
BLAST of GR398079 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5ATJ7_VITVI7.754e-975.68Putative uncharacterized protein OS=Vitis vinifera... [more]
Q3E6W0_ARATH2.947e-868.42At2g47020 OS=Arabidopsis thaliana GN=At2g47020 PE=... [more]
O80723_ARATH2.947e-868.42Putative peptide chain release factor OS=Arabidops... [more]
D7U2V2_VITVI3.848e-879.41Whole genome shotgun sequence of line PN40024, sca... [more]
B9I9C3_POPTR6.564e-877.78Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q6I547_ORYSJ1.910e-772.22Putative peptide chain release factor OS=Oryza sat... [more]
Q0DJH9_ORYSJ1.910e-772.22Os05g0277300 protein (Fragment) OS=Oryza sativa su... [more]
C5YZJ8_SORBI1.910e-782.35Putative uncharacterized protein Sb09g002890 OS=So... [more]
B9FNM2_ORYSJ1.910e-772.22Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AW28_ORYSI1.910e-772.22Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR398079 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G47020.11.124e-1068.42| Symbols: | Peptide chain release factor 1 | chr... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR398079 ID=GR398079; Name=GR398079; organism=Cicer arietinum; type=EST; length=309bp
GCATTACTTATCACTCCATAGATGATGTGATGCAAGGAGAGAATCTCGAT
GTCTTCGTTGATGCTCTTCTTTTAAAAGAAGAAATGGACGCAATTGCAAC
TTTTACTTCTTCTGCATAAAGCCAGTGGGTTAAATTTTTACTTAATATTA
GTTCAATTTTTTATTCTTGTATTGCCTTAAAGAAAAAGTTTCATAATTTG
CGAGAGATGCTAGGCAGAGGAAGCGCAGAGCAAATAATGATTTGTGTATG
GCTATTTAGTAACAGTTTAGAGAGAAAAATGACAGTTTATTCTACCTCCT
CTATTTTGC
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