GR398079
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR398079 vs. TrEMBL
Match: A5ATJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040170 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 7.754e-9 Identity = 28/37 (75.68%), Postives = 37/37 (100.00%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSS 113 IT+HS++DVMQGENLDVF+DALLL++EMDAIA+F+S+ Sbjct: 1505 ITHHSVNDVMQGENLDVFIDALLLQQEMDAIASFSST 1541
BLAST of GR398079 vs. TrEMBL
Match: Q3E6W0_ARATH (At2g47020 OS=Arabidopsis thaliana GN=At2g47020 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8 Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116 IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++ Sbjct: 376 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 413
BLAST of GR398079 vs. TrEMBL
Match: O80723_ARATH (Putative peptide chain release factor OS=Arabidopsis thaliana GN=At2g47020 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.947e-8 Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116 IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++ Sbjct: 358 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 395
BLAST of GR398079 vs. TrEMBL
Match: D7U2V2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028263001 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.848e-8 Identity = 27/34 (79.41%), Postives = 34/34 (100.00%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATF 104 IT+HS++DVMQGENLDVF+DALLL++EMDAIA+F Sbjct: 348 ITHHSVNDVMQGENLDVFIDALLLQQEMDAIASF 381
BLAST of GR398079 vs. TrEMBL
Match: B9I9C3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774637 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.564e-8 Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110 IT+HSI+DVMQGE+LDVF+DALLL++EMDAIA+F S Sbjct: 321 ITHHSINDVMQGESLDVFIDALLLQQEMDAIASFGS 356
BLAST of GR398079 vs. TrEMBL
Match: Q6I547_ORYSJ (Putative peptide chain release factor OS=Oryza sativa subsp. japonica GN=OSJNBa0055E23.6 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110 IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S Sbjct: 315 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 350
BLAST of GR398079 vs. TrEMBL
Match: Q0DJH9_ORYSJ (Os05g0277300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os05g0277300 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110 IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S Sbjct: 314 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 349
BLAST of GR398079 vs. TrEMBL
Match: C5YZJ8_SORBI (Putative uncharacterized protein Sb09g002890 OS=Sorghum bicolor GN=Sb09g002890 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATF 104 IT+HSI DVM+GE+LDVFVDALLL+EEMDAIA+F Sbjct: 381 ITHHSIADVMEGESLDVFVDALLLQEEMDAIASF 414
BLAST of GR398079 vs. TrEMBL
Match: B9FNM2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17885 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110 IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S Sbjct: 333 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 368
BLAST of GR398079 vs. TrEMBL
Match: B8AW28_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19275 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.910e-7 Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTS 110 IT+HSI+DVM+GE+LD+F+DALLL+ EMDAIA+F S Sbjct: 333 ITHHSIEDVMEGESLDIFIDALLLRYEMDAIASFAS 368
BLAST of GR398079 vs. TAIR peptide
Match: AT2G47020.1 (| Symbols: | Peptide chain release factor 1 | chr2:19320090-19322279 REVERSE LENGTH=413) HSP 1 Score: 61.6178 bits (148), Expect = 1.124e-10 Identity = 26/38 (68.42%), Postives = 38/38 (100.00%), Query Frame = 3 Query: 3 ITYHSIDDVMQGENLDVFVDALLLKEEMDAIATFTSSA 116 IT+H+I+D+MQGENLD+F+DALLL++EMDAIA+F+S++ Sbjct: 376 ITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSSTS 413 The following BLAST results are available for this feature:
BLAST of GR398079 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR398079 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR398079 ID=GR398079; Name=GR398079; organism=Cicer arietinum; type=EST; length=309bpback to top |