GR398484
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR398484 vs. TrEMBL
Match: Q9LUV6_ARATH (Genomic DNA, chromosome 3, P1 clone: MCB17 OS=Arabidopsis thaliana GN=At3g22430 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.033e-14 Identity = 50/94 (53.19%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDYQNPMEASSAKRKY-GEE------SRDEFARQREQLLRNAN 710 YGFHMLERRTI+LADGSVRSYFALPP+Y DF P R RFPP Y KRKY GEE R E RQR+Q ++ AN Sbjct: 122 YGFHMLERRTIVLADGSVRSYFALPPNYMDFPPQSRLAGPVFGRFPPF-----YPEEFRDQRMKRKYPGEEEIDRRDERAEMMRQRQQFMQYAN 210
BLAST of GR398484 vs. TrEMBL
Match: A5B748_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022064 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.033e-14 Identity = 62/148 (41.89%), Postives = 66/148 (44.59%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPP----RPLDRFNM---------------RFPPV------------------VRHPDYQNPM-------EASSAKRKYGEE-------------SRDEFARQREQLLRNANGFAN 722 YGFHMLERRTI+LADGSVRSYFAL PDYQDF PPP P RF RFP RH DY N + S KRKY EE DEFARQR+QLL+ N N Sbjct: 105 YGFHMLERRTIVLADGSVRSYFALSPDYQDFPPPPPRAMDPAGRFLPMGPGHGPEPVGPGLGRFPXTGPMSPEGFRGERDDPYSRGRHQDYWNSLGLDGRGHPEGSMKRKYSEEDERDRREDRDRRDGNDEFARQRQQLLQYGNPSLN 252
BLAST of GR398484 vs. TrEMBL
Match: A0MEX8_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.033e-14 Identity = 50/94 (53.19%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDYQNPMEASSAKRKY-GEE------SRDEFARQREQLLRNAN 710 YGFHMLERRTI+LADGSVRSYFALPP+Y DF P R RFPP Y KRKY GEE R E RQR+Q ++ AN Sbjct: 122 YGFHMLERRTIVLADGSVRSYFALPPNYMDFPPQSRLAGPVFGRFPPF-----YPEEFRDQRMKRKYPGEEEIDRRDERAEMMRQRQQFMQYAN 210
BLAST of GR398484 vs. TrEMBL
Match: D7L1P9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479760 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.761e-14 Identity = 50/94 (53.19%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDYQNPMEASSAKRKY-GEE------SRDEFARQREQLLRNAN 710 YGFHMLERRTI+LADGSVRSYFALPP+YQDF P R RFPP Y KRKY GEE R E RQR+ ++ AN Sbjct: 119 YGFHMLERRTIVLADGSVRSYFALPPNYQDFPPQSRLAGPEFGRFPPF-----YPEEFRDQRMKRKYPGEEEIDRRDERAEMLRQRQHFMQYAN 207
BLAST of GR398484 vs. TrEMBL
Match: B9HJY0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564842 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.125e-14 Identity = 64/177 (36.16%), Postives = 72/177 (40.68%), Query Frame = 3 Query: 198 MAGGNHPKSSSSS---------HRKTRWESNTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPALIXXXXXXXXXXXXXAYGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRF------------NMRFPPVVRHP-DYQNPMEASSAKRKYGEES 662 MAGG+HPKSS+ HRK RWES T+ P + YGFHMLERRTI+LADGSVRSY ALPPDYQDF PP P RF RFPP +QN + KRK+ EES Sbjct: 1 MAGGSHPKSSTQKPSSSSTPAPHRKPRWES-TATNNNNPQPPQSNQKLHKPNPSPKPNTGPSPKPVTSTAGPIQPPQVPPFPFPDLGPPPPPTYGFHMLERRTIVLADGSVRSYLALPPDYQDFPRPPLP-PRFLHRGGHLDFLPTGPRFPPSNHDALGFQN-QNQNQNKRKFDEES 174
BLAST of GR398484 vs. TrEMBL
Match: B9HV49_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_566243 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.543e-13 Identity = 66/178 (37.08%), Postives = 74/178 (41.57%), Query Frame = 3 Query: 198 MAGGNHPKSSS---------SSHRKTRWESNTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPALIXXXXXXXXXXXXXAYGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRF------------NMRFPPVVRHPD---YQNPMEASSAKRKYGEE 659 MAGG+HPKSS+ + HRK+RWES TS + YGFHMLERRTI+LADGSVRSY ALPPDYQDF PP P RF RFPP R PD +QN KRK+ EE Sbjct: 1 MAGGSHPKSSTHKPSSSSTPAPHRKSRWES-TSNNNNNPPPPQSNQKLPKPNPSPKPNTGRSPKPATPTAGPIQPSQVPPFPFTDLGPPPPPTYGFHMLERRTIMLADGSVRSYLALPPDYQDFPRPPLP-PRFLHGGPTPEFLPGGPRFPP--RSPDVLGFQN-----QNKRKFEEE 169
BLAST of GR398484 vs. TrEMBL
Match: D7T6Y2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017976001 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.262e-12 Identity = 46/92 (50.00%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDF-APPPRPLDRFNMRFPPVVRHPDYQNPMEASSAKRKYGEESRDEFARQREQLLRNANGFAN 722 YGFHMLERRTI+LADGSVRSYFAL PDYQDF PPPR +D P H + FARQR+QLL+ N N Sbjct: 105 YGFHMLERRTIVLADGSVRSYFALSPDYQDFPPPPPRAMDPAGRFLPMGPGH-------------------GPEPFARQRQQLLQYGNPSLN 177
BLAST of GR398484 vs. TrEMBL
Match: B9RTR8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0912140 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.812e-12 Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDY 611 YGFHMLERRTI LADGSVRSYFALPPDYQDF P RP +RFPP+ +PD+ Sbjct: 104 YGFHMLERRTIALADGSVRSYFALPPDYQDF--PLRP----PLRFPPLGPNPDF 151
BLAST of GR398484 vs. TrEMBL
Match: B4FI96_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.463e-8 Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRP--LDRFNMRFPPVVRHPDYQNPMEASSAKRKYGEESRDEFARQREQ 692 YGFH L+RR + LADG+VR+YFALPPDY F P P P R R P + P M A+RK+ E + FAR +Q Sbjct: 105 YGFHNLDRRVMPLADGTVRTYFALPPDY-SFEPVPLPPLPHRLLPRAAPDLWPPPLHLQMPPHEARRKHPAEQDEGFARHPKQ 186
BLAST of GR398484 vs. TrEMBL
Match: C5WXS1_SORBI (Putative uncharacterized protein Sb01g046510 OS=Sorghum bicolor GN=Sb01g046510 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.085e-7 Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDYQNP-------------MEASSAKRKYGEESRDEFARQREQ 692 YGFH L+RRT++LADG+VR+YFALPPDY P PL R + P +Q P M A+RK+ + + F R +Q Sbjct: 105 YGFHNLDRRTMLLADGTVRTYFALPPDYPFEPAPLPPLPRHLLPRAAPDLWPPHQAPPPPPQMPMPMPVQMPPHEARRKHPADQDEGFPRHHKQ 198
BLAST of GR398484 vs. TAIR peptide
Match: AT3G22430.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). | chr3:7953455-7957605 FORWARD LENGTH=510) HSP 1 Score: 84.7297 bits (208), Expect = 6.580e-17 Identity = 50/94 (53.19%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 450 YGFHMLERRTIILADGSVRSYFALPPDYQDFAPPPRPLDRFNMRFPPVVRHPDYQNPMEASSAKRKY-GEE------SRDEFARQREQLLRNAN 710 YGFHMLERRTI+LADGSVRSYFALPP+Y DF P R RFPP Y KRKY GEE R E RQR+Q ++ AN Sbjct: 122 YGFHMLERRTIVLADGSVRSYFALPPNYMDFPPQSRLAGPVFGRFPPF-----YPEEFRDQRMKRKYPGEEEIDRRDERAEMMRQRQQFMQYAN 210 The following BLAST results are available for this feature:
BLAST of GR398484 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR398484 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR398484 ID=GR398484; Name=GR398484; organism=Cicer arietinum; type=EST; length=818bpback to top |