HO065724

EST Overview
NameHO065724
Unique NameHO065724
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length681
Libraries
Library NameType
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO065724 vs. SwissProt
Match: ISPD_ARATH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.000e-22
Identity = 61/120 (50.83%), Postives = 66/120 (55.00%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V   DV+KVLKDG   GAAV GVP K  IK  N++ LVV  L  K LW   TP V KP L   GF LV   GLEVT  V I   L HPVY   G Y  I  T P DLL A  I + +S
Sbjct:  183 PLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 302          
BLAST of HO065724 vs. TrEMBL
Match: D7TGK2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023131001 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.665e-25
Identity = 66/122 (54.10%), Postives = 73/122 (59.84%), Query Frame = -1
Query:  316 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINSGE 681
            P V  GD+++VLKDG LNGAAV GVPVK  IK AN+E  VV  L  K LW   TP V KP L   GF LVN   LEVT  V I   L HPV+   G Y  I  T P DLL A  I N++SGE
Sbjct:  186 PLVSTGDIEQVLKDGQLNGAAVLGVPVKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPELLRKGFELVNRECLEVTDDVSIVEHLKHPVFITEGSYTNIKVTTPDDLLLAERILNLDSGE 307          
BLAST of HO065724 vs. TrEMBL
Match: A5B4C4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013863 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.665e-25
Identity = 66/122 (54.10%), Postives = 73/122 (59.84%), Query Frame = -1
Query:  316 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINSGE 681
            P V  GD+++VLKDG LNGAAV GVPVK  IK AN+E  VV  L  K LW   TP V KP L   GF LVN   LEVT  V I   L HPV+   G Y  I  T P DLL A  I N++SGE
Sbjct:  190 PLVSTGDIEQVLKDGQLNGAAVLGVPVKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPELLRKGFELVNRECLEVTDDVSIVEHLKHPVFITEGSYTNIKVTTPDDLLLAERILNLDSGE 311          
BLAST of HO065724 vs. TrEMBL
Match: A9ZN09_HEVBR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Hevea brasiliensis GN=HbCMS PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.755e-25
Identity = 65/123 (52.85%), Postives = 72/123 (58.54%), Query Frame = -1
Query:  313 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINSGES 681
            P V   DV+KV++D  +NGAAV GVP K  IK AN+E  VV  L  K LW   TP V KP+L   GF LVN  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I N+NS ES
Sbjct:  187 PLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRDGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILNLNSEES 309          
BLAST of HO065724 vs. TrEMBL
Match: A9ZN10_HEVBR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Hevea brasiliensis GN=HbCMS PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.947e-24
Identity = 64/123 (52.03%), Postives = 72/123 (58.54%), Query Frame = -1
Query:  313 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINSGES 681
            P V   DV+KV++D  +NGAAV GVP K  IK AN+E  VV  L  K LW   TP V KP+L   GF LV+  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I N+NS ES
Sbjct:  187 PLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVSRDGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILNLNSEES 309          
BLAST of HO065724 vs. TrEMBL
Match: B9N0J7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1113320 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.258e-23
Identity = 64/120 (53.33%), Postives = 69/120 (57.50%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V   DV+KVLKDG +NGAAV GVPVK  IK A+ E  VV  L  K LW   TP V KP L   GF LVN  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I + +S
Sbjct:  190 PLVLSEDVEKVLKDGWINGAAVLGVPVKATIKEADGESFVVRTLDRKTLWEMQTPQVMKPELLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILSTSS 309          
BLAST of HO065724 vs. TrEMBL
Match: B3GEM2_POPTR (Putative chloroplast 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (Fragment) OS=Populus trichocarpa GN=CMS PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.258e-23
Identity = 64/120 (53.33%), Postives = 69/120 (57.50%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V   DV+KVLKDG +NGAAV GVPVK  IK A+ E  VV  L  K LW   TP V KP L   GF LVN  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I + +S
Sbjct:  121 PLVLSEDVEKVLKDGWINGAAVLGVPVKATIKEADGESFVVRTLDRKTLWEMQTPQVMKPELLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILSTSS 240          
BLAST of HO065724 vs. TrEMBL
Match: Q2I6K0_STERE (4-diphosphocytidyl-2-C-methyl-D-erythritol synthase OS=Stevia rebaudiana PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.112e-22
Identity = 63/120 (52.50%), Postives = 67/120 (55.83%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V  GDV KVL DGL  GA+V GVP K  IK  N+E  VV  L  K LW   TP V KP+L   GF LVN  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I N +S
Sbjct:  194 PLVTSGDVLKVLNDGLRVGASVLGVPAKATIKEGNSESFVVKTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLLAERILNNDS 313          
BLAST of HO065724 vs. TrEMBL
Match: B3F8G6_NICLS (2-C-methyl-D-erythritol 4-phosphate cytidyltransferase OS=Nicotiana langsdorffii x Nicotiana sanderae PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.112e-22
Identity = 62/117 (52.99%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  331 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXN 681
            P V   D++KVLKDG + GAAV GVP K  IK AN+E  VV  L  K LW   TP V KP L   GF LVN  GLEVT  V I   L HPVY   G Y  I  T P DLL A  I N
Sbjct:  189 PLVWTEDIEKVLKDGWVVGAAVLGVPAKATIKEANSESFVVKTLDRKTLWEMQTPQVIKPELLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILN 305          
BLAST of HO065724 vs. TrEMBL
Match: B6DXM1_CATRO (4-diphosphocytidyl-methylerythritol 2-phosphate synthase OS=Catharanthus roseus PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.983e-21
Identity = 61/117 (52.14%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  331 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXN 681
            P V   DV+KVLKDGL  GAAV GVP K  IK A+++  VV  L  K LW   TP V KP+L   GF LVN   LEVT  V I   L HPVY   G Y  I  T P DLL A  I N
Sbjct:  191 PLVLAEDVEKVLKDGLSIGAAVLGVPAKATIKEADSKSFVVKTLDRKTLWEMQTPQVIKPDLLKKGFELVNRENLEVTDDVSIVEYLKHPVYITEGSYTNIKVTTPDDLLVAERILN 307          
BLAST of HO065724 vs. TrEMBL
Match: D7LQ40_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_664121 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.873e-21
Identity = 61/120 (50.83%), Postives = 66/120 (55.00%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V   DV+KVLKDG   GAAV GVP K  IK  N+E LVV  L  K LW   TP V KP L   GF LV   GLEVT  V I   L HPV+   G Y  I  T P DLL A  I + +S
Sbjct:  181 PLVNSEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSESLVVKTLDRKTLWEMQTPQVIKPELLKRGFELVKREGLEVTDDVSIVEYLKHPVFVTQGSYTNIKVTTPDDLLLAERILSEDS 300          
BLAST of HO065724 vs. TAIR peptide
Match: AT2G02500.1 (| Symbols: ISPD, ATMEPCT, MCT | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:671054-673124 REVERSE LENGTH=302)

HSP 1 Score: 104.375 bits (259), Expect = 6.069e-23
Identity = 61/120 (50.83%), Postives = 66/120 (55.00%), Query Frame = -1
Query:  322 PWVXQGDVQKVLKDGLLNGAAVXGVPVKXXIKXANTEXLVVXXLXXKXLWXXXTPXVXKPNLXXXGFXLVNXXGLEVTXXVXIXXPLXHPVYXXXGXYXXIXXTXPXDLLXAXXIXNINS 681
            P V   DV+KVLKDG   GAAV GVP K  IK  N++ LVV  L  K LW   TP V KP L   GF LV   GLEVT  V I   L HPVY   G Y  I  T P DLL A  I + +S
Sbjct:  183 PLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 302          
The following BLAST results are available for this feature:
BLAST of HO065724 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
ISPD_ARATH6.000e-2250.832-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
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BLAST of HO065724 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7TGK2_VITVI2.665e-2554.10Whole genome shotgun sequence of line PN40024, sca... [more]
A5B4C4_VITVI2.665e-2554.10Putative uncharacterized protein OS=Vitis vinifera... [more]
A9ZN09_HEVBR7.755e-2552.852-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A9ZN10_HEVBR2.947e-2452.032-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
B9N0J7_POPTR3.258e-2353.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B3GEM2_POPTR3.258e-2353.33Putative chloroplast 2-C-methyl-D-erythritol 4-pho... [more]
Q2I6K0_STERE2.112e-2252.504-diphosphocytidyl-2-C-methyl-D-erythritol synthas... [more]
B3F8G6_NICLS2.112e-2252.992-C-methyl-D-erythritol 4-phosphate cytidyltransfe... [more]
B6DXM1_CATRO3.983e-2152.144-diphosphocytidyl-methylerythritol 2-phosphate sy... [more]
D7LQ40_ARALY8.873e-2150.83Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
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BLAST of HO065724 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G02500.16.069e-2350.83| Symbols: ISPD, ATMEPCT, MCT | Nucleotide-diphosp... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..17
score: NAcoord: 24..32
score
NoneNo IPR availableSEGsegsegcoord: 15..30
score: NAcoord: 49..54
score: NAcoord: 62..77
score
NoneNo IPR availableSEGsegsegcoord: 17..29
score
NoneNo IPR availableGENE3D3.90.550.10no descriptioncoord: 1..115
score: 1.6
NoneNo IPR availableSEGsegsegcoord: 19..25
score: NAcoord: 38..46
score: NAcoord: 92..100
score
NoneNo IPR availableSEGsegsegcoord: 7..18
score
NoneNo IPR availableSEGsegsegcoord: 5..8
score: NAcoord: 40..48
score
IPR0012284-diphosphocytidyl-2C-methyl-D-erythritol synthasePFAMPF01128IspDcoord: 2..115
score: 2.3

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO065724 ID=HO065724; Name=HO065724; organism=Cicer arietinum; type=EST; length=681bp
GGAAANCNAGACCNTTATTATGNTTGCCNAACTTGGNTAAAGATTCNTTA
ATACCNTCNAATTGCATGNGGCTCNAGTAATGAAAGTAGGNTTCNCCNAC
CATGNGGAAACNCTTCCCNTGGNTTAAGCNAGAGCCNTGGGNTTTTACNC
AAATCNCAATAAGTTACAGAGTTAACTAAAAAACTTGNATACNGTTTGAG
CTGCCNGACACCNTGNTGCATTGNTGCNGGGNAAAAAATAATAATCNATT
GNAGAAAAAATGNTTAATAACGATTTACCNTCNACTGGGAGATTGGNAAA
ACTTTATTAANAACTTTCCCCNGAATTTATATTCNATATTCNCNCNGCCN
GTAATAAATCNTCNGGGGNAGTCNCCNTGATGNTGGNATAANATCCNTCN
GNGANATAAACAGGATGNTTAAGGGGCNCCNCAATANACACNTCNTCNGT
AACTTCNAGACCNTCNCNATTTACAAGCNCAAAGCCNTCCCNCNGCAAAT
TGGGTTTGANGACCNGGGGAGTCNGCNTCNCCCATAGCGNTTTTCNGNCC
AATGNTCNAACCACTAANGNTTCAGTATTTGCCNCTTTGATTGNGGNCTT
TACAGGAACACCAANAACAGCAGCTCCGTTCAACAATCCATCTTTAAGGA
CCTTTTGCACATCNCCTTGNAACACCCAAGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR001228IspD