FE671948

EST Overview
NameFE671948
Unique NameFE671948
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length368
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of FE671948 vs. TrEMBL
Match: D7TXH6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_81.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036214001 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.541e-9
Identity = 38/97 (39.18%), Postives = 49/97 (50.52%), Query Frame = 3 
Query:    9 MEPNDNQLSSFFNHAXXXXXXXXXXXXXXXGNSXXXXXXXXXXXXPTNGHLSYTDESHIRYPHSVASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299
            MEPND +L+S+F+H                 +             P+NG L  ++   + Y HSV SAV+S  E   RKRGRPRKYGT EQ  +AKK
Sbjct:    1 MEPNDTRLTSYFHHHQQQPQPPPPPPPQPQPHHQTQNPVAATAASPSNGLLPPSERPPLGYHHSVPSAVTSPPETVRRKRGRPRKYGTSEQGLSAKK 97
[Close]
BLAST of FE671948 vs. TAIR peptide
Match: AT3G04590.2 (| Symbols: | AT hook motif DNA-binding family protein | chr3:1239245-1241603 REVERSE LENGTH=411)

HSP 1 Score: 52.373 bits (124), Expect = 7.604e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 3 
Query:  189 YPHSV-ASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299
            YPHSV +SAV++  EP  RKRGRPRKY TPEQ  AAKK
Sbjct:   88 YPHSVPSSAVTAPMEPVKRKRGRPRKYVTPEQALAAKK 125
[Close]
BLAST of FE671948 vs. TAIR peptide
Match: AT3G04590.1 (| Symbols: | AT hook motif DNA-binding family protein | chr3:1239213-1241603 REVERSE LENGTH=309)

HSP 1 Score: 52.373 bits (124), Expect = 7.604e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 3 
Query:  189 YPHSV-ASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299
            YPHSV +SAV++  EP  RKRGRPRKY TPEQ  AAKK
Sbjct:   88 YPHSVPSSAVTAPMEPVKRKRGRPRKYVTPEQALAAKK 125
The following BLAST results are available for this feature:
BLAST of FE671948 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
D7TXH6_VITVI1.541e-939.18Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of FE671948 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G04590.27.604e-871.05| Symbols: | AT hook motif DNA-binding family pro... [more]
AT3G04590.17.604e-871.05| Symbols: | AT hook motif DNA-binding family pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 58..72
score
NoneNo IPR availableSEGsegsegcoord: 16..30
score: NAcoord: 34..45
score: NAcoord: 98..106
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE671948 ID=FE671948; Name=FE671948; organism=Cicer arietinum; type=EST; length=368bp
AAAAATAAATGGAACCCAATGACAACCAACTAAGCTCTTTTTTCAACCAC
GCTAACCACCACCACCAACAGAAGCACCACAATCAACAACCACCACAGGG
TAACTCAACCACCGTAGTCGCAGCCACTACCACCACCGCAGCTCCGACTA
ACGGTCATTTATCATACACAGATGAATCCCACATACGGTACCCTCATTCA
GTGGCTTCTGCTGTGTCCTCTCAGCGAGAACCACCTAACAGGAAACGAGG
AAGACCTAGAAAGTACGGAACACCGGAACAACCTCACGCTGCTAAAAAGA
CCTCTACGTCGTCGTTATCATCCACCCCCGCTGGTGCCGACAAAAGCGTC
AAGAACACCACACCCTCT
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