FE671948
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE671948 vs. TrEMBL
Match: D7TXH6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_81.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036214001 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.541e-9 Identity = 38/97 (39.18%), Postives = 49/97 (50.52%), Query Frame = 3 Query: 9 MEPNDNQLSSFFNHAXXXXXXXXXXXXXXXGNSXXXXXXXXXXXXPTNGHLSYTDESHIRYPHSVASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299 MEPND +L+S+F+H + P+NG L ++ + Y HSV SAV+S E RKRGRPRKYGT EQ +AKK Sbjct: 1 MEPNDTRLTSYFHHHQQQPQPPPPPPPQPQPHHQTQNPVAATAASPSNGLLPPSERPPLGYHHSVPSAVTSPPETVRRKRGRPRKYGTSEQGLSAKK 97
BLAST of FE671948 vs. TAIR peptide
Match: AT3G04590.2 (| Symbols: | AT hook motif DNA-binding family protein | chr3:1239245-1241603 REVERSE LENGTH=411) HSP 1 Score: 52.373 bits (124), Expect = 7.604e-8 Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 3 Query: 189 YPHSV-ASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299 YPHSV +SAV++ EP RKRGRPRKY TPEQ AAKK Sbjct: 88 YPHSVPSSAVTAPMEPVKRKRGRPRKYVTPEQALAAKK 125
BLAST of FE671948 vs. TAIR peptide
Match: AT3G04590.1 (| Symbols: | AT hook motif DNA-binding family protein | chr3:1239213-1241603 REVERSE LENGTH=309) HSP 1 Score: 52.373 bits (124), Expect = 7.604e-8 Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 3 Query: 189 YPHSV-ASAVSSQREPPNRKRGRPRKYGTPEQPHAAKK 299 YPHSV +SAV++ EP RKRGRPRKY TPEQ AAKK Sbjct: 88 YPHSVPSSAVTAPMEPVKRKRGRPRKYVTPEQALAAKK 125 The following BLAST results are available for this feature:
BLAST of FE671948 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 1
BLAST of FE671948 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE671948 ID=FE671948; Name=FE671948; organism=Cicer arietinum; type=EST; length=368bpback to top |