FE672413
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE672413 vs. SwissProt
Match: RPAB1_CAEEL (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis elegans GN=rpb-5 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.213e-18 Identity = 50/141 (35.46%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVK-----REDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 M E E +L+R+ KTV+QM++DR Y+V+ +L + FK ++G+ R DL I + D +DQ++VFF +DAK +M N+ R IIV Q+ +T A+ ++G++ + K+ +E FLE EL+VN+ Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDM-APKYMLEHFLEAELMVNI 140
BLAST of FE672413 vs. SwissProt
Match: RPAB1_CAEBR (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae GN=rpb-5 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.503e-18 Identity = 50/141 (35.46%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVK-----REDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 M E E +L+R+ KTV+QM++DR Y+V+ +L + FK FG+ R DL I + D +DQ++VFF +D K +M N+ R IIV Q+ +T A+ ++G++ + K+ +E FLE EL+VN+ Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDM-APKYMLEHFLEAELMVNI 140
BLAST of FE672413 vs. SwissProt
Match: RPAB1_RAT (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus GN=Polr2e PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.946e-17 Identity = 44/137 (32.12%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE-----HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 EEE +L+++ KT++Q+ +DR Y+V+ +L + ++FK++FG+ +R DL + + D +DQ++VFF ++ K RM +N+ R +IV Q +T A+ +L ++ + K+ +E FL+ ELL+N+ Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDM-APKYVLEQFLQQELLINI 139
BLAST of FE672413 vs. SwissProt
Match: RPAB1_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus GN=Polr2e PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.946e-17 Identity = 44/137 (32.12%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE-----HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 EEE +L+++ KT++Q+ +DR Y+V+ +L + ++FK++FG+ +R DL + + D +DQ++VFF ++ K RM +N+ R +IV Q +T A+ +L ++ + K+ +E FL+ ELL+N+ Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDM-APKYVLEQFLQQELLINI 139
BLAST of FE672413 vs. SwissProt
Match: RPAB1_PONAB (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Pongo abelii GN=POLR2E PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.770e-16 Identity = 43/137 (31.39%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE-----HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 EEE +L+++ KT++Q+ +DR Y+V+ +L + ++F+++FG+ +R DL + + D +DQ++VFF ++ K RM +N+ R +IV Q +T A+ +L ++ + K+ +E FL+ ELL+N+ Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDM-APKYILEQFLQQELLINI 139
BLAST of FE672413 vs. SwissProt
Match: RPAB1_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Bos taurus GN=POLR2E PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.150e-16 Identity = 44/137 (32.12%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE-----HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 EEE +L+++ KT++Q+ +DR Y+V+ L + ++FK++FG +R DL + + D +DQ++VFF ++ K RM +N+ R +IV Q +T A+ +L ++ + K+ +E FL+ ELL+N+ Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDM-APKYILEQFLQQELLINI 139
BLAST of FE672413 vs. SwissProt
Match: RPAB1_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Homo sapiens GN=POLR2E PE=1 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 6.727e-16 Identity = 43/137 (31.39%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE-----HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 EEE +L+++ KT++Q+ +DR Y+V+ +L + ++FK++ G+ +R DL + + D +DQ++VFF ++ K RM +N+ R +IV Q +T A+ +L ++ + K+ +E FL+ ELL+N+ Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDM-APKYILEQFLQQELLINI 139
BLAST of FE672413 vs. SwissProt
Match: RPAB1_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc1 OS=Dictyostelium discoideum GN=polr2e PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.187e-12 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 217 EELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKH-RIEIFLEDELLVNV 609 E++ +L ++ KTV+QM++DR Y+++ + ++ F V RE+L + +D +D IYVFF D K + M R IIV Q +T A+ AL E S K +E F E ELLVN+ Sbjct: 2 EDINRLLQIRKTVLQMLSDREYIITAYEQEYPRESF-------VSRENLTMYCVKKDDPTDSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNI 126
BLAST of FE672413 vs. SwissProt
Match: COX2_DAUCA (Cytochrome c oxidase subunit 2 OS=Daucus carota GN=COX2 PE=3 SV=1) HSP 1 Score: 41.2022 bits (95), Expect = 4.214e-9 Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = -2 Query: 61 SGQ*SDAVPGGLNQISISVQREGVY 135 SG DAVPG LNQISISVQREGVY Sbjct: 195 SGVKCDAVPGRLNQISISVQREGVY 219 HSP 2 Score: 40.0466 bits (92), Expect = 4.214e-9 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = -3 Query: 9 GFTSEICGTNHAFTPIVVEA 68 G SEICGTNHAFTPIVVEA Sbjct: 221 GQCSEICGTNHAFTPIVVEA 240
BLAST of FE672413 vs. SwissProt
Match: RPAB1_KLULA (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Kluyveromyces lactis GN=RPB5 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.098e-9 Identity = 38/141 (26.95%), Postives = 75/141 (53.19%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHV---KREDLVIKAPNRDKSSDQ------IYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 E +++L+R +KTV +M+ DR Y ++ ++ +S +DFK+K+ + + +R+ + ++ ++S ++ ++V FCD+A +T N GI + QS +T A L +++ IE F E L+VN+ Sbjct: 6 ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPTEESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITPSANKILP--TAAPAVIETFPEASLVVNI 144
BLAST of FE672413 vs. TrEMBL
Match: C6SXZ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.086e-32 Identity = 72/136 (52.94%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 MV SEEE+ +L+R+ KTV+QM+ DRN++V D ++ MSK +FKSK+GEH+KREDLVI +D S DQIYVFF D+ K NRM ++NV R I+V Q+ LT AR + EISS H +E+F E ELLVN+ Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFH-LEVFQEAELLVNI 135
BLAST of FE672413 vs. TrEMBL
Match: C6SVA4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.524e-31 Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 MV SEEE+ +L+R+ KTV+QM+ DR ++V D ++ MSK +FKSK+GEH+KREDLVI +D S DQIYVFF D+ K NRM ++NV R I+V Q+ LT AR + EISS H +E+F E ELLVN+ Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFH-LEVFQEAELLVNI 135
BLAST of FE672413 vs. TrEMBL
Match: O81098_ARATH (AT3g22320/MCB17_5 OS=Arabidopsis thaliana GN=AtRPABC24.3 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.693e-27 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 205 VFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 + +EEEL +L+R+ KT++QM+ DR Y ++DS+LTM+KQ F K G+++KREDLV R+ +SDQ+Y+FF D+AK NRM ++NV R I+V Q LT AR + EISS H +E+F E E+LVN+ Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH-LEVFQEAEMLVNI 134
BLAST of FE672413 vs. TrEMBL
Match: B9N7D1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_828412 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.693e-27 Identity = 65/136 (47.79%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 M +EEE+ +L R+ KTV+QM+ DR Y V D ++ M+++ F+SK+G ++KREDLVI R+ SSDQIYVFF ++AK NRM ++NV R I+V Q LT AR + EIS+ H +E+F E ELLVN+ Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH-LEVFQEAELLVNI 135
BLAST of FE672413 vs. TrEMBL
Match: D7L1N3_ARALY (ATRPABC24.3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479745 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.772e-27 Identity = 63/135 (46.67%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 205 VFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 + +EEE+ +L+R+ KT++QM+ DR Y ++DS+LTM+KQ F K G+++KREDLV R+ +SDQ+Y+FF D+AK NRM ++NV R I+V Q LT AR + EISS H +E+F E E+LVN+ Sbjct: 1 MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH-LEVFQEAEMLVNI 134
BLAST of FE672413 vs. TrEMBL
Match: B3TLL2_ELAGV (DNA-directed RNA polymerases II 24 kDa polypeptide OS=Elaeis guineensis var. tenera PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.193e-26 Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 211 SEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 SE+++++LFR+ +TV+QM+ DR Y+V D ++ M+K F KFGE VKREDLVI ++ +DQIYVFF +DAK RM +NV RGI+V Q LT AR +L E+ S K+ +E+F + ELLVN+ Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDPADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEV-SQKYMLEVFQDTELLVNI 133
BLAST of FE672413 vs. TrEMBL
Match: A9RWG5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206246 PE=4 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.113e-26 Identity = 59/132 (44.70%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 +E+ +L+R+ KTV++M+ DR+YVV+D +LT+SK+ F+ K+G+ KREDLVI+ P R +++ I+VFF ++AK +RM T+NV R I+V Q LT AR + E+ +SK+ +E+F E ELLVN+ Sbjct: 7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEM-ASKYHLEVFQEAELLVNI 137
BLAST of FE672413 vs. TrEMBL
Match: A9RKG6_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55574 PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.022e-25 Identity = 57/132 (43.18%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 +E+ +L+R+ KTV++M+ DR+YVV++ +L +K++F+ K+G+ KREDLVI+ P R +++ I+VFF ++AK +RM T+NV R I+V Q LT AR + E+ SSK+ +E+F E ELLVN+ Sbjct: 7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEM-SSKYHVEVFQEAELLVNI 137
BLAST of FE672413 vs. TrEMBL
Match: B9RKM1_RICCO (DNA-directed RNA polymerase II, putative OS=Ricinus communis GN=RCOM_1051580 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.098e-24 Identity = 64/155 (41.29%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 202 MVFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSD-------------------QIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 M SE+E+ +LFR+ +TV+QM+ DR Y+V+DS++ ++K F SK+G+++KREDLVI RD S QIYVFF ++ K NRM ++NV R I+V Q LT AR + EI+S H +E+F E ELLVN+ Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSKRDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQSLTPFARTCIAEIASKFH-LEVFQESELLVNI 154
BLAST of FE672413 vs. TrEMBL
Match: A9NTD1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.361e-23 Identity = 58/132 (43.94%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 +E+ KLFR+ +TV+QM+NDR+Y+V D ++ +K+ F KFGE K+EDLVI R+ S+QI+VFF ++AK RM ++ V R I+V Q LT AR ++ E S H +E+F E ELLVN+ Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSPSEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFSGKFH-LEVFQEAELLVNI 134
BLAST of FE672413 vs. TAIR peptide
Match: AT3G22320.1 (| Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:7891045-7892094 REVERSE LENGTH=205) HSP 1 Score: 126.331 bits (316), Expect = 1.247e-29 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 205 VFSEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 + +EEEL +L+R+ KT++QM+ DR Y ++DS+LTM+KQ F K G+++KREDLV R+ +SDQ+Y+FF D+AK NRM ++NV R I+V Q LT AR + EISS H +E+F E E+LVN+ Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH-LEVFQEAEMLVNI 134
BLAST of FE672413 vs. TAIR peptide
Match: AT5G57980.1 (| Symbols: RPB5C | RNA polymerase II fifth largest subunit, C | chr5:23469050-23469768 REVERSE LENGTH=210) HSP 1 Score: 82.8037 bits (203), Expect = 1.581e-16 Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 214 EEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGE---HVKREDLVIKAPNRDKSSDQIYVFFCDDAKXXXXXXXXXXN-RMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 ++E+T++F+V +TV+QM+ DR Y + +SDL + +++F +F + V +E L + A +D+IYVF+ + K +M D V RGI+V +T PAR A+ E++ IE+F E EL+ N+ Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKML-TIEVFEEAELVTNI 139
BLAST of FE672413 vs. TAIR peptide
Match: AT2G41340.1 (| Symbols: RPB5D | RNA polymerase II fifth largest subunit, D | chr2:17229026-17230442 FORWARD LENGTH=218) HSP 1 Score: 65.0846 bits (157), Expect = 3.411e-11 Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 211 SEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQIYVFFCDDA-KXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 S E K + +T ++M+ DR Y VSD D+ +S Q F++ +GEH + L I A +R SS +I V FC + ++ +N+ I+V QS +T A A+ E+ S K +E+F +LLVNV Sbjct: 17 SSVECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAV-ELFSFK--VELFEITDLLVNV 147
BLAST of FE672413 vs. TAIR peptide
Match: AT3G57080.1 (| Symbols: RPB5B, NRPE5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:21125878-21127470 FORWARD LENGTH=222) HSP 1 Score: 57.3806 bits (137), Expect = 7.113e-9 Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 1 Query: 211 SEEELTKLFRVYKTVVQMINDRNYVVSDSDLTMSKQDFKSKFGEHVKREDLVIKAPNRDKSSDQI-YVFFCDDAKXXXXXXXXXXNRMTTDNVGRGIIVCQSQLTGPARNALGEISSSKHRIEIFLEDELLVNV 609 S EE + + + +QM+ DR Y VSD D+ +S DF++ +GE + L I A +R S+ ++ VFF + ++ + + I+V Q+ +T A A+ E+ S K +EIF +LLVN+ Sbjct: 21 SSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAI-ELFSFK--VEIFQITDLLVNI 151
BLAST of FE672413 vs. TAIR peptide
Match: ATMG00160.1 (| Symbols: COX2 | cytochrome oxidase 2 | chrM:40502-42628 REVERSE LENGTH=260) HSP 1 Score: 38.891 bits (89), Expect = 1.672e-8 Identity = 20/25 (80.00%), Postives = 20/25 (80.00%), Query Frame = -2 Query: 61 SGQ*SDAVPGGLNQISISVQREGVY 135 SG DAVPG LNQISI VQREGVY Sbjct: 194 SGVKCDAVPGRLNQISILVQREGVY 218 HSP 2 Score: 36.965 bits (84), Expect = 1.672e-8 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = -3 Query: 9 GFTSEICGTNHAFTPIVVEA 68 G SEICGTNHAFT IVVEA Sbjct: 220 GQCSEICGTNHAFTSIVVEA 239 The following BLAST results are available for this feature:
BLAST of FE672413 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of FE672413 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE672413 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE672413 ID=FE672413; Name=FE672413; organism=Cicer arietinum; type=EST; length=610bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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