GR397608
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR397608 vs. SwissProt
Match: SSU72_DICDI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Dictyostelium discoideum GN=ssu72 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.627e-24 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRD--HVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNG+L ML+RN SVKLAP++WQE F++V TF+++V+D VIEDL RD LL+ V ++NL+VKD HEEA GA+ L++ IE +WEE +D I+ F KQ R+ Sbjct: 95 RNGLLNMLERNISVKLAPEKWQEEQ-QSKFEIVYTFDQRVYDAVIEDLLQRDVSSSLLQPVHIINLQVKDTHEEAVGGAQHALEITSIIEKTLNWEEKLDQILEDFYKQTSRQ 206 HSP 2 Score: 24.6386 bits (52), Expect = 6.627e-24 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY+ + L+ +D EL Sbjct: 74 FGTPYQEIYTSLKNQDQEL 92
BLAST of GR397608 vs. SwissProt
Match: SSU72_MOUSE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Mus musculus GN=Ssu72 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.177e-21 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+++T EE+V+D V+EDL++R+ + V VVN++++DNHEEA +GA L +LCQ I+ E E ID+++ FE++ R Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_RAT (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Rattus norvegicus GN=Ssu72 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.761e-21 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+++T EE+V+D V+EDL++R+ + V VVN++++DNHEEA +GA L +LCQ I+ E E ID+++ FE++ R Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_HUMAN (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Homo sapiens GN=SSU72 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.761e-21 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+++T EE+V+D V+EDL++R+ + V VVN++++DNHEEA +GA L +LCQ I+ E E ID+++ FE++ R Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_CHICK (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Gallus gallus GN=SSU72 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.761e-21 Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+++T EE+V+D V+EDL++R+ + V V+N++++DNHEEA +GA L +LCQ I+ E E ID+++ FE++ R Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQ-NCKD-VFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_BOVIN (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Bos taurus GN=SSU72 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.830e-21 Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+++T EE+V+D V+EDL++R+ + V V+N++++DNHEEA +GA L +LCQ I+ E E ID+++ FE++ R Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_DANRE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Danio rerio GN=ssu72 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.967e-20 Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = -2 Query: 147 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGF-EKQHR 476 T+NGIL ML RN +K P+R+Q + FD+VIT EE+V+D V+EDL++R+ + V V+N++++DNHEEA +GA L +LCQ I+ + E +D+++ F EK HR Sbjct: 77 TQNGILHMLDRNKRIKSRPERFQ--SCRDQFDLVITCEERVYDQVLEDLNSREQESFQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEEKSHR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_XENLA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Xenopus laevis GN=ssu72 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.356e-20 Identity = 51/111 (45.95%), Postives = 76/111 (68.47%), Query Frame = -2 Query: 144 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRR 476 T+NGIL ML RN +K P+R+Q N D FD+VIT EE+V+D V+E+L++R+ + V V+N++++DNHEEA +GA L +LCQ I+ E E ID+++ FE + R Sbjct: 77 TQNGILHMLDRNRRIKPRPERFQ-NCKD-YFDLVITCEERVYDQVVEELNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEDKSGR 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_SCHPO (RNA polymerase II subunit A C-terminal domain phosphatase ssu72 OS=Schizosaccharomyces pombe GN=ssu72 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.275e-19 Identity = 48/117 (41.03%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 150 ASQKRP*TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEI-EAVESWEESIDDIIVGFEKQH 497 A R T NG+L ML RN +K AP RWQ+ D +++VIT EE+ +D + EDL+ R L + V ++N+++KDNHEEA++G + LDL ++ EA + EE I+ F+ H Sbjct: 71 AQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQ--DSIYNIVITCEERCYDAICEDLYRRGETLNRPVYLINVDIKDNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSNH 185
BLAST of GR397608 vs. SwissProt
Match: SSU72_CRYNE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Cryptococcus neoformans GN=SSU72 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.196e-18 Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 150 TRNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQH 476 TRNGILPML RN VK AP++WQE DVVIT EE+ +D V +DL R + + ++N+E+KDN EEA I + L+L + IEA + + ID I+ +H Sbjct: 69 TRNGILPMLDRNRKVKKAPEKWQE-LKSVLADVVITCEERCYDAVCDDLLTRSGEYNRPIHIINIEIKDNPEEAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKH 176 HSP 2 Score: 24.6386 bits (52), Expect = 1.196e-18 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY + +L +DP+L Sbjct: 49 FGTPYDDIYRDLESQDPQL 67
BLAST of GR397608 vs. TrEMBL
Match: D7T1F4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037420001 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.005e-57 Identity = 97/111 (87.39%), Postives = 105/111 (94.59%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGILPMLKRNSSVK APQRWQ+NAADG FDVV TFEEKVFDMV+EDLHNRDHVL+KTVLV+NLEVKDNHEEAAIGARL LDLCQEIEA ESWE+S+DD++ GFEKQHRRK Sbjct: 75 RNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVEDLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEKQHRRK 185 HSP 2 Score: 41.2022 bits (95), Expect = 1.005e-57 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYKHM D+LRRKDP+L Sbjct: 54 FGTPYKHMFDDLRRKDPDL 72
BLAST of GR397608 vs. TrEMBL
Match: C6SZ62_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 3.788e-57 Identity = 97/111 (87.39%), Postives = 106/111 (95.50%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGI PMLKRNS+VKLAPQRWQENAADG+FDVV+TFEEKVFDMVIEDLHNRDH LLKTVLV+NLEVKDNH+EAA+GARLTLDLC+EIEA ESWEESID+II GFE +HRRK Sbjct: 75 RNGIFPMLKRNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIEDLHNRDHALLKTVLVINLEVKDNHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGFENKHRRK 185 HSP 2 Score: 40.4318 bits (93), Expect = 3.788e-57 Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYKHM+++LRRKDP+L Sbjct: 54 FGTPYKHMIEDLRRKDPDL 72
BLAST of GR397608 vs. TrEMBL
Match: B9RPG0_RICCO (Protein SSU72, putative OS=Ricinus communis GN=RCOM_1370030 PE=4 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.871e-54 Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGILPMLKRNSSVKLAPQRWQ+NAADG+FDVV +FEEKVFDMVIEDLHNRDHVL+++VLV+NLEVKDNHEEAAIGARL L+LCQEIEA ESWE+SID+II FE +HRRK Sbjct: 75 RNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIEDLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFETKHRRK 185 HSP 2 Score: 38.1206 bits (87), Expect = 2.871e-54 Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYK M D+LRRKDP+L Sbjct: 54 FGTPYKQMFDDLRRKDPDL 72
BLAST of GR397608 vs. TrEMBL
Match: B9IEE3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_775960 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 8.293e-54 Identity = 92/111 (82.88%), Postives = 104/111 (93.69%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGILPMLKRNS VKLAPQRWQ+NAADG+F VV TFEEKVFDMV+EDLHNRDHVLLK+VLV+NLEVKDNHEEAA+G +LTL+LCQ+IEAVESWE+SID+II FE +HRRK Sbjct: 75 RNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLEDLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEAKHRRK 185 HSP 2 Score: 39.2762 bits (90), Expect = 8.293e-54 Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYK M D+LRRKDPEL Sbjct: 54 FGTPYKQMFDDLRRKDPEL 72
BLAST of GR397608 vs. TrEMBL
Match: D7KRM7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895246 PE=4 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.077e-50 Identity = 86/111 (77.48%), Postives = 99/111 (89.19%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGIL MLKRN SVKLAPQRWQ+NA DG FDVV+TFEEKVFD V+EDL+NR+ L+KT+LV+NLEVKDNHEEAAIG RL L+LCQEIE E+WE++IDDI+ GFEKQHRRK Sbjct: 75 RNGILQMLKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLEDLNNREQSLMKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEKQHRRK 185 HSP 2 Score: 40.4318 bits (93), Expect = 3.077e-50 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYK M DELRRKDPEL Sbjct: 54 FGTPYKQMFDELRRKDPEL 72
BLAST of GR397608 vs. TrEMBL
Match: Q9C9T0_ARATH (Putative uncharacterized protein At1g73820 OS=Arabidopsis thaliana GN=At1g73820/F25P22_24 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.158e-49 Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGIL M+KRN SVKLAPQRWQ+NA DG FDVV+TFEEKVFD V+EDL+NR+ L KT+LV+NLEVKDNHEEAAIG RL L+LCQEIE E+WE++IDDI+ GFEKQHRRK Sbjct: 75 RNGILQMIKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLEDLNNREQSLTKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEKQHRRK 185 HSP 2 Score: 40.4318 bits (93), Expect = 1.158e-49 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYK M DELRRKDPEL Sbjct: 54 FGTPYKQMFDELRRKDPEL 72
BLAST of GR397608 vs. TrEMBL
Match: C0PT75_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.780e-47 Identity = 81/111 (72.97%), Postives = 99/111 (89.19%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNG+L MLKRN +VK+APQRWQENA DG FDVV TFEE+VFDMVIEDL NR+ +L+++VLVVNL+VKD+HEEAA+GARL LDLCQ++EA SWE+ IDDI++ FE+QHRRK Sbjct: 75 RNGLLQMLKRNLNVKMAPQRWQENAVDGPFDVVFTFEERVFDMVIEDLQNREPILMRSVLVVNLDVKDSHEEAAVGARLALDLCQKLEAANSWEDEIDDIVMRFERQHRRK 185 HSP 2 Score: 36.965 bits (84), Expect = 1.780e-47 Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY+ M D+L+RKDPEL Sbjct: 54 FGTPYRRMFDDLKRKDPEL 72
BLAST of GR397608 vs. TrEMBL
Match: Q2QX64_ORYSJ (Os12g0168200 protein OS=Oryza sativa subsp. japonica GN=Os12g0168200 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 2.961e-44 Identity = 74/112 (66.07%), Postives = 98/112 (87.50%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIE-AVESWEESIDDIIVGFEKQHRRK 473 RNG+LPMLKRN+SVKLAPQRWQ+NA DG FDV+ +FEE+VFD++++D+HNR+ +LK L++N++VKDNHEEA +GA+L LDLCQ++E A E WEE IDD+I+ FEKQH+RK Sbjct: 81 RNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHKRK 192 HSP 2 Score: 33.113 bits (74), Expect = 2.961e-44 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY + D+LRRKDP+L Sbjct: 60 FGTPYNVIYDDLRRKDPDL 78
BLAST of GR397608 vs. TrEMBL
Match: B4FVM8_MAIZE (Protein SSU72 OS=Zea mays PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.464e-43 Identity = 71/112 (63.39%), Postives = 100/112 (89.29%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVE-SWEESIDDIIVGFEKQHRRK 473 RNG+LPMLKRN+SVKLAPQRWQ+NA DG FD+++TFEE+VFD+V+ED++NR+ L+K VL++N++VKDNHEEA +GA+L ++LCQ++EA++ WE+ IDD+I FEKQH+R+ Sbjct: 79 RNGLLPMLKRNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVEDMNNREPRLMKCVLIINMDVKDNHEEAGVGAKLAVELCQKLEAIDGDWEDIIDDLITAFEKQHKRR 190 HSP 2 Score: 33.8834 bits (76), Expect = 2.464e-43 Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY + D+LRRKDPEL Sbjct: 58 FGTPYGAIYDDLRRKDPEL 76
BLAST of GR397608 vs. TrEMBL
Match: C5YSM7_SORBI (Putative uncharacterized protein Sb08g004310 OS=Sorghum bicolor GN=Sb08g004310 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 9.260e-43 Identity = 71/112 (63.39%), Postives = 99/112 (88.39%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVE-SWEESIDDIIVGFEKQHRRK 473 RNG+LPMLKRN+SVKLAPQRWQ+NA DG FD+++TFEE+VFD+V+ED+ NR+ L+K VL++N++VKDNHEEA +GA+L ++LCQ++EA++ WE+ IDD+I FEKQH+R+ Sbjct: 80 RNGLLPMLKRNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVEDMSNREPRLMKCVLIINMDVKDNHEEAGVGAKLAVELCQKLEAIDGDWEDIIDDLITAFEKQHKRR 191 HSP 2 Score: 32.7278 bits (73), Expect = 9.260e-43 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPY + D+LRRKDP+L Sbjct: 59 FGTPYGAIYDDLRRKDPDL 77
BLAST of GR397608 vs. TAIR peptide
Match: AT1G73820.1 (| Symbols: | Ssu72-like family protein | chr1:27755740-27757158 REVERSE LENGTH=193) HSP 1 Score: 180.644 bits (457), Expect = 9.707e-52 Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = -2 Query: 141 RNGILPMLKRNSSVKLAPQRWQENAADGTFDVVITFEEKVFDMVIEDLHNRDHVLLKTVLVVNLEVKDNHEEAAIGARLTLDLCQEIEAVESWEESIDDIIVGFEKQHRRK 473 RNGIL M+KRN SVKLAPQRWQ+NA DG FDVV+TFEEKVFD V+EDL+NR+ L KT+LV+NLEVKDNHEEAAIG RL L+LCQEIE E+WE++IDDI+ GFEKQHRRK Sbjct: 75 RNGILQMIKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLEDLNNREQSLTKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEKQHRRK 185 HSP 2 Score: 40.4318 bits (93), Expect = 9.707e-52 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = -3 Query: 473 FGTPYKHMLDELRRKDPEL 529 FGTPYK M DELRRKDPEL Sbjct: 54 FGTPYKQMFDELRRKDPEL 72 The following BLAST results are available for this feature:
BLAST of GR397608 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR397608 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR397608 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR397608 ID=GR397608; Name=GR397608; organism=Cicer arietinum; type=EST; length=531bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|