GR404238
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404238 vs. TrEMBL
Match: B9N4W1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_784527 PE=4 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.116e-77 Identity = 132/163 (80.98%), Postives = 147/163 (90.18%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 H R+SLLY RL SGDVVWDKVI+VRGHHVRPY+VGDWCYPLL +L+TPFSP+G GTPAQNLFDGMLMKGRSVVVDA+ALLKGRWKILQDLNVG HH PQTIVACCVLHNLCQIAREPEPE WK+PDE G RVL++EKS H+ G+SLRQ L +DLHQ+LS+R Sbjct: 278 HLRESLLYNRLVSGDVVWDKVIDVRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPAQNLFDGMLMKGRSVVVDAIALLKGRWKILQDLNVGLHHAPQTIVACCVLHNLCQIAREPEPETWKDPDEGGVPVRVLENEKSFHYFGDSLRQALTEDLHQRLSSR 440
BLAST of GR404238 vs. TrEMBL
Match: B9S790_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0774550 PE=4 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 7.021e-77 Identity = 131/163 (80.37%), Postives = 148/163 (90.80%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 HFRDSLLY RL S D+VW+KVINVRGHHVRPYVVGDWCYPLL +L+TPFSP+G GTPAQNLFDGMLMKGRS VV+A+ LLKGRWKILQDL+VG +H PQTIVACCVLHNLCQ+AREPEPE+WKEPDESG RVL++EKS H+ G+SLRQ LADDLHQ+LS+R Sbjct: 297 HFRDSLLYNRLVSADLVWEKVINVRGHHVRPYVVGDWCYPLLSFLMTPFSPNGSGTPAQNLFDGMLMKGRSAVVEAIGLLKGRWKILQDLDVGLNHAPQTIVACCVLHNLCQVAREPEPEIWKEPDESGSPARVLENEKSFHYFGDSLRQALADDLHQRLSSR 459
BLAST of GR404238 vs. TrEMBL
Match: B9HRX5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557350 PE=4 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.762e-76 Identity = 131/163 (80.37%), Postives = 145/163 (88.96%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 H R S+LY RL SGDVVWDKVINVRGHHVRPY+VGDWCYPLL +L+TPFSP+G GTP+QNLFDGMLMKGRSVVVDA+ALLKGRWKILQDLNVG H PQTIVACCVLHNLCQIAREPEPE WK+PDE G R L++EKS H+ G+SLRQ LADDLHQ+LS+R Sbjct: 280 HLRGSVLYNRLVSGDVVWDKVINVRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPSQNLFDGMLMKGRSVVVDAIALLKGRWKILQDLNVGLDHAPQTIVACCVLHNLCQIAREPEPETWKDPDEGGVPARGLENEKSFHYFGDSLRQALADDLHQRLSSR 442
BLAST of GR404238 vs. TrEMBL
Match: Q9LJL8_ARATH (AT3g19120/MVI11_3 OS=Arabidopsis thaliana GN=At3g19120 PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 5.031e-75 Identity = 126/163 (77.30%), Postives = 148/163 (90.80%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 HFRDSLLY+RLTSGD+VW+KVIN+RGHHVRPY+VGDWCYPLL +L+TPFSP+G GTP +NLFDGMLMKGRSVVV+A+ LLK RWKILQ LNVG +H PQTIVACCVLHNLCQIAREPEPE+WK+PDE+G RVL+SE+ ++ GESLRQ LA+DLHQ+LS+R Sbjct: 284 HFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSLNVGVNHAPQTIVACCVLHNLCQIAREPEPEIWKDPDEAGTPARVLESERQFYYYGESLRQALAEDLHQRLSSR 446
BLAST of GR404238 vs. TrEMBL
Match: Q8LE69_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.563e-74 Identity = 125/163 (76.69%), Postives = 147/163 (90.18%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 HFRDSLLY+RLTSGD+VW+KVIN+RGHHVRPY+VGDWCYPLL +L+TPFSP+G GTP +NLFDGMLMKGRSVVV+A+ LLK RWKILQ LNVG + PQTIVACCVLHNLCQIAREPEPE+WK+PDE+G RVL+SE+ ++ GESLRQ LA+DLHQ+LS+R Sbjct: 279 HFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQGLNVGVNRAPQTIVACCVLHNLCQIAREPEPEIWKDPDEAGTPARVLESERQFYYYGESLRQALAEDLHQRLSSR 441
BLAST of GR404238 vs. TrEMBL
Match: D5AAT3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.179e-57 Identity = 103/166 (62.05%), Postives = 130/166 (78.31%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDL---HQKLSTR 622 HFR+S L+ +LTS V+ D VI +RG+ +RPY+ GDWCYPLL +LL PFSP+G GTPAQN+FD LMKGRSVV A LLKGRWK+LQDLNVG +H PQTIVACCVLHNLCQ+ EPEP + ++P E+GP R +DS+KS+++ GE+ RQ L +DL HQ++S R Sbjct: 262 HFRESSLFNKLTSEQVLMDSVITIRGNQLRPYLAGDWCYPLLSFLLVPFSPNGSGTPAQNMFDAALMKGRSVVEQATGLLKGRWKMLQDLNVGLNHAPQTIVACCVLHNLCQLFGEPEPLMCRDPRENGPAARTIDSDKSINYFGETSRQALIEDLQERHQRVSMR 427
BLAST of GR404238 vs. TrEMBL
Match: D7MYC4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_921092 PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.992e-47 Identity = 87/118 (73.73%), Postives = 104/118 (88.14%), Query Frame = -3 Query: 134 LTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 487 +TPFSP+G G+P +NLFDGMLMKGRSVVV+A+ LLK RWKILQ LNVG +H PQTIVACCVLHNLCQIAREPEPE+WK+PDE+G RVL+SE+ ++ GESLRQ LA+DLHQ+LS+R Sbjct: 1 MTPFSPNGSGSPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSLNVGVNHAPQTIVACCVLHNLCQIAREPEPEIWKDPDEAGTPARVLESERQFYYYGESLRQALAEDLHQRLSSR 118
BLAST of GR404238 vs. TrEMBL
Match: Q5TWL2_ANOGA (AGAP006957-PA OS=Anopheles gambiae GN=AGAP006957 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.449e-14 Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = -3 Query: 146 SLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLN--VGFHHVPQTIVACCVLHNLCQIAREPEPELW----KEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQK 610 S +YQR+ D K+ + V P ++ D YPLLP+L+TP+ + TPA+ F+ KGR+ +V L GRWK L + V VP+ I+ CC+LHN+ + P + W E D + QP S+ GE +R L+ +H++ Sbjct: 288 SSIYQRMEQLDGPCQKIDKIS---VLPLLLSDGKYPLLPWLITPYPTTAQMTPAERSFNVYAAKGRACIVRTFERLVGRWKALNRCSTMVAASCVPEIILTCCILHNIAEQNGSPYKDAWSECHNEEDVAPEQPHWECQITSMD--GEEVRNRLSKFMHER 443
BLAST of GR404238 vs. TrEMBL
Match: C5XAE9_SORBI (Putative uncharacterized protein Sb02g004140 OS=Sorghum bicolor GN=Sb02g004140 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.301e-11 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = -3 Query: 245 INVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDL--NVGFHHVPQTIVACCVLHNL---CQIAREPEPELWKEPD 559 ++ G +R YV GD CYPLLP+L+TP+ + P QN F+ R + +A+A LKG W+IL + + +P I+ CC+LHN+ C P EL + D Sbjct: 291 VSAEGAEIREYVAGDSCYPLLPWLMTPYEGKNLSAPLQN-FNVRQKAARLLGTNALARLKGSWRILHKVMWRPDKNKLPSIILVCCLLHNILIDCHDELLPSVELPEHHD 399
BLAST of GR404238 vs. TrEMBL
Match: C0HFH6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.301e-11 Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = -3 Query: 293 INVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDL--NVGFHHVPQTIVACCVLHNL 559 ++ G +R Y+ GD CYPLLP+L+TPF + P QN F+ R + +A+A LKG W+IL + + +P I+ CC+LHN+ Sbjct: 260 VSAEGAEIREYIAGDSCYPLLPWLMTPFEGKHLPAPLQN-FNARQKAARLLGTNALARLKGSWRILHKVMWRPDKNKLPSIILVCCLLHNI 349
BLAST of GR404238 vs. TAIR peptide
Match: AT3G19120.1 (| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:6609678-6611018 REVERSE LENGTH=446) HSP 1 Score: 284.263 bits (726), Expect = 3.665e-77 Identity = 126/163 (77.30%), Postives = 148/163 (90.80%), Query Frame = -3 Query: 134 HFRDSLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDLNVGFHHVPQTIVACCVLHNLCQIAREPEPELWKEPDESGPQPRVLDSEKSLHFCGESLRQVLADDLHQKLSTR 622 HFRDSLLY+RLTSGD+VW+KVIN+RGHHVRPY+VGDWCYPLL +L+TPFSP+G GTP +NLFDGMLMKGRSVVV+A+ LLK RWKILQ LNVG +H PQTIVACCVLHNLCQIAREPEPE+WK+PDE+G RVL+SE+ ++ GESLRQ LA+DLHQ+LS+R Sbjct: 284 HFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPLLSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSLNVGVNHAPQTIVACCVLHNLCQIAREPEPEIWKDPDEAGTPARVLESERQFYYYGESLRQALAEDLHQRLSSR 446
BLAST of GR404238 vs. TAIR peptide
Match: AT5G12010.1 (| Symbols: | unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3877975-3879483 REVERSE LENGTH=502) HSP 1 Score: 63.929 bits (154), Expect = 7.786e-11 Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = -3 Query: 251 SLLYQRLTSGDVVWDKVINVRGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQD-LNVGFHHVPQTIVACCVLHNLCQIAREP-EPELWKE 610 SLLYQR +G ++ +V G +PLL ++L P++ + T Q+ F+ + + + V +A LKGRW LQ V +P + ACCVLHN+C++ E EPEL E Sbjct: 354 SLLYQRANNGGLLKGM-----------WVAGGPGHPLLDWVLVPYTQQNL-TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPELMVE 463
BLAST of GR404238 vs. TAIR peptide
Match: AT4G29780.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr4:14579859-14581481 FORWARD LENGTH=540) HSP 1 Score: 58.5362 bits (140), Expect = 3.271e-9 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = -3 Query: 260 YVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQD-LNVGFHHVPQTIVACCVLHNLCQIAREPE-PEL 529 ++VG+ +PL YLL P++ + T Q+ F+ + + + + A LKGRW LQ V +P + ACCVLHN+C++ +E PEL Sbjct: 408 WIVGNSGFPLTDYLLVPYTRQNL-TWTQHAFNESIGEIQGIATAAFERLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPEL 498
BLAST of GR404238 vs. TAIR peptide
Match: AT3G63270.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:23375932-23377398 REVERSE LENGTH=396) HSP 1 Score: 58.151 bits (139), Expect = 4.272e-9 Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = -3 Query: 293 RGHHVRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDL--NVGFHHVPQTIVACCVLHNL 550 +G +R YVVG YPLLP+L+TP S + + F+ K RSV A LKG W+IL + +P I+ CC+LHN+ Sbjct: 263 QGAQIREYVVGGISYPLLPWLITPHD-SDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIILVCCLLHNI 349
BLAST of GR404238 vs. TAIR peptide
Match: AT3G55350.1 (| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:20518518-20520690 FORWARD LENGTH=406) HSP 1 Score: 53.5286 bits (127), Expect = 1.052e-7 Identity = 29/84 (34.52%), Postives = 46/84 (54.76%), Query Frame = -3 Query: 293 VRPYVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQDL--NVGFHHVPQTIVACCVLHNL 538 +R Y+VGD +PLLP+LLTP+ P Q F+ + A++ LK RW+I+ + + +P+ I CC+LHN+ Sbjct: 272 LREYIVGDSGFPLLPWLLTPYQGKPTSLP-QTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHNI 354
BLAST of GR404238 vs. TAIR peptide
Match: AT1G72270.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr1:27199733-27211122 REVERSE LENGTH=2845) HSP 1 Score: 50.447 bits (119), Expect = 8.908e-7 Identity = 40/145 (27.59%), Postives = 69/145 (47.59%), Query Frame = -3 Query: 125 YVVGDWCYPLLPYLLTPFSPSGMGTPAQNLFDGMLMKGRSVVVDAVALLKGRWKILQD--LNVGFHHVPQTIVACCVLHNLCQIAREPEPELWK-----EPDESGPQPRVLDSEKSLH-FCGESLRQV--LADDLHQKLSTR*LL 529 Y++GD C PLLP+L+TP+ + + F+ ++ G V A A ++ RW+IL +P I C+LHN + + + + + E ++G + D E+ F GE+ R+ + D + + LS R LL Sbjct: 265 YILGDSCLPLLPWLVTPYDLTSDEESFREEFNNVVHTGLHSVEIAFAKVRARWRILDKKWKPETIEFMPFVITTGCLLHNFLVNSGDDDDSVEECVNGCEAGDNGEMRKDDDKEEETRSFEGEAYRESKRIRDAIAENLSRRKLL 409 The following BLAST results are available for this feature:
BLAST of GR404238 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR404238 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404238 ID=GR404238; Name=GR404238; organism=Cicer arietinum; type=EST; length=624bpback to top |