GR405707
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR405707 vs. SwissProt
Match: AB1D_ARATH (ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.304e-11 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419 MPSLQLL+LT G+ +ASRRK+ILLA+GI+ GGTA Y++SR +P CN +++D + E+ Sbjct: 1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67
BLAST of GR405707 vs. TrEMBL
Match: A5ASB3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025957 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.492e-15 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMN 431 M SLQLL+LT HG+S LASRRK +L+A+G+L+ GGTAAYMQSR +P FGH N +N+ + ++EV N Sbjct: 1 MSSLQLLQLTEHGRSLLASRRKTLLVAAGVLVAGGTAAYMQSRFSCRRPNSFGHYNGISNEGETPDKEVGN 71
BLAST of GR405707 vs. TrEMBL
Match: B9H532_POPTR (Peroxisomal membrane ABC transporter family, PMP family OS=Populus trichocarpa GN=POPTRDRAFT_831368 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.049e-13 Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMNG 434 MPSLQLL+LT HG+ LASRRK++L A+GIL GGTA Y+QSR R K F + N +DKK++++ V NG Sbjct: 1 MPSLQLLQLTEHGRGILASRRKSLLFAAGILAAGGTAVYVQSRIRSKKSDSFLYYNGIKDDKKISDKLVTNG 72
BLAST of GR405707 vs. TrEMBL
Match: D7M963_ARALY (Peroxisomal abc transporter OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490770 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.676e-11 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMNGSTA 443 MPSLQLL+LT G+ +ASRRK+ILLA+GI+ GGTA Y++SR +P HCN +++D + E+ N A Sbjct: 1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVSSPRPDSSRHCNGQSDDDEALEKLTGNDKNA 75
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.2 (| Symbols: PXA1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1338) HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419 MPSLQLL+LT G+ +ASRRK+ILLA+GI+ GGTA Y++SR +P CN +++D + E+ Sbjct: 1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.3 (| Symbols: PXA1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1352) HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419 MPSLQLL+LT G+ +ASRRK+ILLA+GI+ GGTA Y++SR +P CN +++D + E+ Sbjct: 1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.1 (| Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1337) HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419 MPSLQLL+LT G+ +ASRRK+ILLA+GI+ GGTA Y++SR +P CN +++D + E+ Sbjct: 1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67 The following BLAST results are available for this feature:
BLAST of GR405707 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR405707 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 3
BLAST of GR405707 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR405707 ID=GR405707; Name=GR405707; organism=Cicer arietinum; type=EST; length=445bpback to top |