HO065356

EST Overview


Name	HO065356
Unique Name	HO065356
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	523

Libraries


Library Name	Type
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_MAGSA (30S ribosomal protein S16 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rpsP PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.544e-19
Identity = 43/98 (43.88%), Postives = 66/98 (67.35%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPR 356
            M ++IRLSR G K +PFY+++ AD+R+PRDG+ +E +G YNP+   D G+R  ++ DRVK+WLSVGAQP++ + R     GL+  P      ++  P+
Sbjct:    1 MALKIRLSRGGAKKRPFYKIVVADARAPRDGRFIEKVGTYNPMLPNDNGQRWILDEDRVKHWLSVGAQPTDRLVRFFADKGLVAKPVRAEQTKQPQPK 98

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_SPHWW (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.045e-19
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGL 308
            M V IRL+R G K +P+YR++ AD+RSPRDG  +E +G YNPL  +D  KR+ ++ DR K+WLSVGAQP++ V R L  AG+
Sbjct:    1 MAVSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAKHWLSVGAQPTDRVARFLDAAGV 82

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_ROSDO (30S ribosomal protein S16 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.045e-19
Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGL 308
            M ++IRL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ +RV+YWL  GAQP++ V R+L  AGL
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQYWLGQGAQPTDRVARMLEAAGL 82

[Close]

BLAST of HO065356 vs. SwissProt
Match: RT16_BOVIN (28S ribosomal protein S16, mitochondrial OS=Bos taurus GN=MRPS16 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 7.895e-19
Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 3

Query:   54 GGKMVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTV 329
            GG + +R+ L   GC N+PFYR++AA ++ PRDG+ +E LG Y+P+P   G K + +N DR+++W+  GA  S PVE+LL  +G  P  P V
Sbjct:   14 GGHLTIRLALG--GCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPMPNSHGEKLVALNLDRIRHWIGCGAHLSKPVEKLLGLSGFFPLHPMV 103

[Close]

BLAST of HO065356 vs. SwissProt
Match: RT16_PONAB (28S ribosomal protein S16, mitochondrial OS=Pongo abelii GN=MRPS16 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.031e-18
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 3

Query:   54 GGKMVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPP 323
            GG + +R+ L   GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP   G K + +N DR+++W+  GA  S P+E+LL  AG  P  P
Sbjct:   14 GGHLTIRLALG--GCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFPLHP 101

[Close]

BLAST of HO065356 vs. SwissProt
Match: RT16_HUMAN (28S ribosomal protein S16, mitochondrial OS=Homo sapiens GN=MRPS16 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.031e-18
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 3

Query:   54 GGKMVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPP 323
            GG + +R+ L   GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP   G K + +N DR+++W+  GA  S P+E+LL  AG  P  P
Sbjct:   14 GGHLTIRLALG--GCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLAGFFPLHP 101

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_ZYMMO (30S ribosomal protein S16 OS=Zymomonas mobilis GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.031e-18
Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLL 311
            M V IRLSR G K +PFYR++ A+SRSPRDG  +E +G YNP   +D   R+ ++ DR ++WLSVGAQP++ V R L  AGLL
Sbjct:    1 MAVSIRLSRGGAKRRPFYRIVIANSRSPRDGSFIEKIGSYNPQLPKDNENRVIVDLDRARHWLSVGAQPTDRVARFLDAAGLL 83

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_RHOCS (30S ribosomal protein S16 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.759e-18
Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPR 356
            M V+IRLSR G K +PFY ++ A+SR+PRDG  +E +G YNP+   D  +R+ +  DR+K WL+ GAQP++ V R L +A L+P P      +K  P+
Sbjct:    1 MSVKIRLSRGGAKKRPFYSIVVANSRAPRDGDFIEKVGTYNPMVPHDHPERVVLQEDRIKEWLAKGAQPTDRVARFLGKANLIPMPALRETPKKSAPK 98

[Close]

BLAST of HO065356 vs. SwissProt
Match: RS16_DINSH (30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.759e-18
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLP 314
            M ++IRL+R G K +PFYR++AADSR PRDG+ +E LG YNPL  +D   R+ ++ +RV+YWL  GA+P++ V R+L  A +LP
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDLERVQYWLGEGAKPTDRVARMLEAAEVLP 84

[Close]

BLAST of HO065356 vs. SwissProt
Match: RT16_MOUSE (28S ribosomal protein S16, mitochondrial OS=Mus musculus GN=Mrps16 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.297e-18
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 3

Query:   54 GGKMVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPP 323
            GG + +R+ L   GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP   G K + +N DR+++W+  GA  S P+E+LL  +G  P  P
Sbjct:   14 GGHLTIRLALG--GCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLSGFFPLHP 101

[Close]

BLAST of HO065356 vs. TrEMBL
Match: B3IWG2_MEDTR (30S ribosomal protein S16 OS=Medicago truncatula GN=rps16-2 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.309e-65
Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGTAVTENP 455
            MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGR+I QQK PP+++N+ TAV ENP
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRIIGQQK-PPSSNNSDTAVIENP 130

[Close]

BLAST of HO065356 vs. TrEMBL
Match: C6SVZ1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.088e-59
Identity = 112/132 (84.85%), Postives = 118/132 (89.39%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGTAVT-ENP 455
            MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NFDRVKYWLSVGAQPS PVERLLFRAG+LPPPP VAM RKGGPRD RPVDALTGRV++Q+K    N+N     T ENP
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLNQEKAANANNNEQQHDTPENP 132

[Close]

BLAST of HO065356 vs. TrEMBL
Match: C6SXD4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.025e-58
Identity = 111/132 (84.09%), Postives = 116/132 (87.88%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQK-QPPNNSNNGTAVTENP 455
            MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NFDRVKYWLSVGAQPS PVERLLFRAG+LPPPP VAM RKGGPRD RPVDALTGRV+ Q+K    NN+       ENP
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADANNTEQQHDTPENP 132

[Close]

BLAST of HO065356 vs. TrEMBL
Match: B3IWG4_POPAL (30S ribosomal protein S16 OS=Populus alba GN=rps16-1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.358e-54
Identity = 98/125 (78.40%), Postives = 110/125 (88.00%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGT 437
            MVVRIRLSR GC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NF+RVKYWLSVGAQPS PV+R+LFRAGLLPPPP + M RKGGPRD RPVD +TGR +  +K P ++ +N +
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNAS 125

[Close]

BLAST of HO065356 vs. TrEMBL
Match: B9N881_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837423 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.025e-54
Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGT 437
            MVVRIRLSR GC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NF+RVKYWLSVGAQPS PV+R+LFRAG+LPPPP + M RKGGPRD RPVD +TGR +  +K P ++ +N +
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNAS 125

[Close]

BLAST of HO065356 vs. TrEMBL
Match: D7TB62_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015186001 PE=4 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.561e-53
Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQK----QPPNNSNNG 434
            MVVRIRLSR GCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NFDRVKYWLSVGAQPS+PV+++LFRAGLLPPPP VAM RKGG RD RPVD LTGR++   K    + P +  +G
Sbjct:    1 MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDEDG 128

[Close]

BLAST of HO065356 vs. TrEMBL
Match: D7MM86_ARALY (Ribosomal protein S16 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918853 PE=4 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.561e-53
Identity = 97/123 (78.86%), Postives = 110/123 (89.43%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNN 431
            MVVRIRLSR GCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMG+ FDR+KYWLSVGAQPS+PV+RLLFR+GLLPPPP VAM RKGG RD RPVD +TGR +D + +  N S+N
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNASDN 123

[Close]

BLAST of HO065356 vs. TrEMBL
Match: Q9LTS6_ARATH (30S ribosomal protein S16 OS=Arabidopsis thaliana GN=At5g56940 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.706e-53
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNN 431
            MVVRIRLSR GCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMG+ FDR+KYWLSVGAQPS+PV+RLLFR+GLLPPPP VAM RKGG RD RPVD +TGR +D + +  N ++N
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDN 123

[Close]

BLAST of HO065356 vs. TrEMBL
Match: Q8LDI6_ARATH (30S ribosomal protein S16 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.706e-53
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNN 431
            MVVRIRLSR GCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMG+ FDR+KYWLSVGAQPS+PV+RLLFR+GLLPPPP VAM RKGG RD RPVD +TGR +D + +  N ++N
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDN 123

[Close]

BLAST of HO065356 vs. TrEMBL
Match: B3IWG3_SOLLC (30S ribosomal protein S16 OS=Solanum lycopersicum GN=rps16 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 8.239e-52
Identity = 97/130 (74.62%), Postives = 110/130 (84.62%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNNGTAVTEN 452
            MVVR+RLSR GCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMG+NFDR+KYWLSVGAQPS+PV+RLLFRAG+LPPPP +AM +KGGPRD R VD +TGR+   +         G+ V E+
Sbjct:    1 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLKYWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAVPTVGSEVDED 130

[Close]

BLAST of HO065356 vs. TAIR peptide
Match: AT5G56940.1 (| Symbols: | Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135)

HSP 1 Score: 210.305 bits (534), Expect = 4.894e-55
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDMRPVDALTGRVIDQQKQPPNNSNN 431
            MVVRIRLSR GCKN+PF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMG+ FDR+KYWLSVGAQPS+PV+RLLFR+GLLPPPP VAM RKGG RD RPVD +TGR +D + +  N ++N
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDN 123

[Close]

BLAST of HO065356 vs. TAIR peptide
Match: AT4G34620.1 (| Symbols: SSR16 | small subunit ribosomal protein 16 | chr4:16535084-16536092 REVERSE LENGTH=113)

HSP 1 Score: 136.346 bits (342), Expect = 8.982e-33
Identity = 61/113 (53.98%), Postives = 86/113 (76.11%), Query Frame = 3

Query:   63 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRD-MRPVDALTGRVID 398
            M V+IRL+RLGCK++PFYRV+ AD +S RDGK +EVLG+Y+PL G++   R+ + FDR+KYWLSVGAQP++ VE +LFRAGL+PP P V +  K G +   + V  +TG +++
Sbjct:    1 MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIKYWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEILN 113

[Close]

BLAST of HO065356 vs. TAIR peptide
Match: ATCG00050.1 (| Symbols: RPS16 | ribosomal protein S16 | chrC:5084-6188 REVERSE LENGTH=79)

HSP 1 Score: 51.2174 bits (121), Expect = 3.800e-7
Identity = 26/81 (32.10%), Postives = 45/81 (55.56%), Query Frame = 3

Query:   66 VVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGL 308
            +V++RL R G K +  YR++A D R  R+G+ L  +G+Y+P+  Q       +N   +  +L  GAQP+     +  +AG+
Sbjct:    1 MVKLRLKRCGRKQRAVYRILAIDVRYRREGRDLSKVGFYDPITNQ-----TFLNLSAILDFLKKGAQPTRTAHDISKKAGI 76

The following BLAST results are available for this feature:

BLAST of HO065356 vs. SwissProt
BLAST of HO065356 vs. TrEMBL
BLAST of HO065356 vs. TAIR peptide

BLAST of HO065356 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS16_MAGSA	3.544e-19	43.88	30S ribosomal protein S16 OS=Magnetospirillum magn...	[more]
RS16_SPHWW	6.045e-19	53.66	30S ribosomal protein S16 OS=Sphingomonas wittichi...	[more]
RS16_ROSDO	6.045e-19	53.66	30S ribosomal protein S16 OS=Roseobacter denitrifi...	[more]
RT16_BOVIN	7.895e-19	44.57	28S ribosomal protein S16, mitochondrial OS=Bos ta...	[more]
RT16_PONAB	1.031e-18	45.56	28S ribosomal protein S16, mitochondrial OS=Pongo ...	[more]
RT16_HUMAN	1.031e-18	45.56	28S ribosomal protein S16, mitochondrial OS=Homo s...	[more]
RS16_ZYMMO	1.031e-18	54.22	30S ribosomal protein S16 OS=Zymomonas mobilis GN=...	[more]
RS16_RHOCS	1.759e-18	44.90	30S ribosomal protein S16 OS=Rhodospirillum centen...	[more]
RS16_DINSH	1.759e-18	51.19	30S ribosomal protein S16 OS=Dinoroseobacter shiba...	[more]
RT16_MOUSE	2.297e-18	44.44	28S ribosomal protein S16, mitochondrial OS=Mus mu...	[more]

BLAST of HO065356 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B3IWG2_MEDTR	1.309e-65	93.13	30S ribosomal protein S16 OS=Medicago truncatula G...	[more]
C6SVZ1_SOYBN	9.088e-59	84.85	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXD4_SOYBN	2.025e-58	84.09	Putative uncharacterized protein OS=Glycine max PE...	[more]
B3IWG4_POPAL	1.358e-54	78.40	30S ribosomal protein S16 OS=Populus alba GN=rps16...	[more]
B9N881_POPTR	3.025e-54	77.60	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TB62_VITVI	2.561e-53	78.13	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MM86_ARALY	2.561e-53	78.86	Ribosomal protein S16 family protein OS=Arabidopsi...	[more]
Q9LTS6_ARATH	5.706e-53	78.05	30S ribosomal protein S16 OS=Arabidopsis thaliana ...	[more]
Q8LDI6_ARATH	5.706e-53	78.05	30S ribosomal protein S16 OS=Arabidopsis thaliana ...	[more]
B3IWG3_SOLLC	8.239e-52	74.62	30S ribosomal protein S16 OS=Solanum lycopersicum ...	[more]

BLAST of HO065356 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G56940.1	4.894e-55	78.05	\| Symbols: \| Ribosomal protein S16 family protein...	[more]
AT4G34620.1	8.982e-33	53.98	\| Symbols: SSR16 \| small subunit ribosomal protein...	[more]
ATCG00050.1	3.800e-7	32.10	\| Symbols: RPS16 \| ribosomal protein S16 \| chrC:50...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 41..51 score
None	No IPR available	PANTHER	PTHR12919:SF5	MITOCHONDRIAL RIBOSOMAL PROTEIN S16	coord: 8..119 score: 1.3
IPR000307	Ribosomal protein S16	GENE3D	3.30.1320.10	no description	coord: 9..90 score: 3
IPR000307	Ribosomal protein S16	HAMAP	MF_00385	Ribosomal_S16	coord: 8..86 score: 22
IPR000307	Ribosomal protein S16	PANTHER	PTHR12919	30S RIBOSOMAL PROTEIN S16	coord: 8..119 score: 1.3
IPR000307	Ribosomal protein S16	PFAM	PF00886	Ribosomal_S16	coord: 15..76 score: 6.4
IPR000307	Ribosomal protein S16	TIGRFAMs	TIGR00002	S16: ribosomal protein S16	coord: 9..89 score: 1
IPR000307	Ribosomal protein S16	SUPERFAMILY	54565	Ribosomal protein S16	coord: 8..92 score: 1.5

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO065356 ID=HO065356; Name=HO065356; organism=Cicer arietinum; type=EST; length=523bp
GGATTCGAAAGAGAGATTGAGAGAATCAAATAGGGAGGGTTTGAATTGAA
TTTGGGGGGAAAATGGTGGTTAGGATTCGTCTATCACGTTTAGGATGCAA
GAACAAACCATTCTACCGTGTTATGGCCGCCGATAGCAGATCTCCAAGAG
ACGGAAAACACCTCGAAGTTCTGGGTTATTACAATCCTTTACCTGGTCAA
GATGGTGGCAAACGAATGGGAATCAATTTCGATAGAGTCAAGTATTGGCT
TTCTGTTGGAGCTCAACCATCCAATCCAGTAGAGCGTCTTCTATTTCGAG
CAGGGTTACTTCCACCTCCACCAACTGTGGCTATGGCACGCAAAGGTGGA
CCTCGTGACATGCGTCCTGTCGATGCTTTAACCGGACGTGTCATCGATCA
ACAGAAGCAGCCTCCTAATAATTCCAACAATGGCACTGCTGTAACTGAAA
ACCCTTGAAATCTAATGTTTTTCGTTGTCTTCTTTATAAGAAGAAGAAGA
ATAAGCTGTTAAATAGTGTACCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000307	Ribosomal_bS16

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