ES560273

EST Overview


Name	ES560273
Unique Name	ES560273
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	363

Libraries


Library Name	Type
LIBEST_021248 Ascochyta rabiei induced library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_DICDI (DNA-directed RNA polymerases I and III subunit rpac1 OS=Dictyostelium discoideum GN=polr1c PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.409e-18
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 2

Query:    8 EDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERV 295
            + ++ + A++L+ KCP  VFDIED G+         P  CT+CRECIR   E+E  V + RV+DHFIF+IESTGA+    +F +A+KI  +KC  V
Sbjct:  246 KSIKGDKANQLLEKCPKKVFDIEDSGQ----VVAARPLDCTMCRECIRD-PEFEQNVKIERVRDHFIFSIESTGALKSREIFQEAIKIFIEKCNIV 336

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_BOVIN (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus GN=POLR1C PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.578e-16
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITEL 307
            L+E V  E A+EL       V ++++I +G++ A V NPR  T  RE  R  K  +  V L RV+DHFIF++ESTG +PPDVL ++A+K+L  KC+R + EL
Sbjct:  241 LLEPVEGEAAEELSRCFSPGVIEVQEI-QGKKVARVANPRLDTFSREVFRNEK-LKKVVRLARVRDHFIFSVESTGVLPPDVLVSEAIKVLMGKCQRFLDEL 340

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_HUMAN (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens GN=POLR1C PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.834e-16
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITEL 307
            L+E V  E A+EL       V +++++ +G++ A V NPR  T  RE  R  K  +  V L RV+DH+IF++ESTG +PPDVL ++A+K+L  KC R + EL
Sbjct:  241 LLEPVEGEAAEELSRCFSPGVIEVQEV-QGKKVARVANPRLDTFSREIFRNEK-LKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDEL 340

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_MOUSE (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Mus musculus GN=Polr1e PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITEL 307
            L+E V  E A+EL       V ++E++ +G++ A V N R  T  RE  R  K  +  V L RV+DH+IF++ESTG +PPDVL ++A+KIL  KC R + EL
Sbjct:  241 LLEPVEGEAAEELSQCFSPGVIEVEEV-QGKKVARVANARLDTFSREIFRHEK-LKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLDEL 340

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_SCHPO (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pombe GN=rpc40 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.133e-13
Identity = 37/88 (42.05%), Postives = 60/88 (68.18%), Query Frame = 2

Query:   47 KC-PVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITEL 307
            KC P  V ++E+   G+++A V + R  T+ REC+R   E+ D+V L RV+DH++F++ESTG + PDVLF +++ +L+ KC  V + L
Sbjct:  256 KCFPKGVIELEEGPDGKKQARVADVRKDTVSRECLRH-PEFADKVQLGRVRDHYLFSVESTGIMKPDVLFIKSIAVLKSKCLAVKSSL 342

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPAC1_YEAST (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Saccharomyces cerevisiae GN=RPC40 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.275e-9
Identity = 34/96 (35.42%), Postives = 58/96 (60.42%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCE 289
            +++ ++ E A       P  V  I++   G   A V + R  T+ RE +R  +E+ D+V L RV++HFIF +ES GA+ P+ +F ++V+IL++K E
Sbjct:  235 ILQPIKGESARRFQKCFPPGVIGIDE---GSDEAYVKDARKDTVSREVLRY-EEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVRILKNKAE 326

[Close]

BLAST of ES560273 vs. SwissProt
Match: RPB3_DICDI (DNA-directed RNA polymerase II subunit rpb3 OS=Dictyostelium discoideum GN=polr2c PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.603e-8
Identity = 28/95 (29.47%), Postives = 54/95 (56.84%), Query Frame = 2

Query:    5 MEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEW--EDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDK 283
            ++++ D+  +E V  CP  V+      +  ++ T+ +P  C  C EC +  + +   D V L + +D FIFT+ES+GA+ P+ +   A++I++ K
Sbjct:  196 IDELTDQQKEEWVGSCPTKVYSYSP-HQSTQQVTIEDPLRCVYCLECKKKAESFGKPDLVHLEQKQDKFIFTVESSGALKPEDIVLYAIQIIKRK 289

[Close]

BLAST of ES560273 vs. TrEMBL
Match: C6TAS0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.999e-45
Identity = 88/103 (85.44%), Postives = 95/103 (92.23%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+E V DELA+EL  KCPVNVFDIEDIGKG+RRA V  PR CTLCRECIRGGKEWEDRVSLRRVK+HFIFTIESTGA+PP+VLFT+AVKILEDKCERVITELS
Sbjct:  286 LLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 388

[Close]

BLAST of ES560273 vs. TrEMBL
Match: B9S9W7_RICCO (DNA-directed RNA polymerase I/III subunits, putative OS=Ricinus communis GN=RCOM_0523110 PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.648e-44
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+ED+ DE+A+EL  KCPVNVFDIEDIG G++RATV  PRACTLCRECIRGG EW+ RVSLRRVKDHFIFTIESTGA+PP+VLFT+AVK+LEDKCERVITELS
Sbjct:  273 LLEDIEDEIAEELTKKCPVNVFDIEDIGNGKKRATVARPRACTLCRECIRGG-EWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLEDKCERVITELS 374

[Close]

BLAST of ES560273 vs. TrEMBL
Match: D7UAJ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00014713001 PE=4 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.478e-39
Identity = 75/103 (72.82%), Postives = 92/103 (89.32%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L++++ DE A+ELV KCPVNVFDIEDI KG+++ATV  PRACTLCRECIRG  +W+  V++RRVK+HFIFTIESTGA+PP+VLF +AVK+LEDKCERVITELS
Sbjct:  271 LLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKATVARPRACTLCRECIRGD-DWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKCERVITELS 372

[Close]

BLAST of ES560273 vs. TrEMBL
Match: B9GFY9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550226 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.128e-37
Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+E+++ E A+EL+ KCP  VFDIED G  +++A V + RACTLCRECIRG +EWE RV+L RVKDHFIFTIESTGA+PP+VLFT+AVKILE KCERVITELS
Sbjct:  288 LLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCERVITELS 390

[Close]

BLAST of ES560273 vs. TrEMBL
Match: Q39216_ARATH (RNA polymerase subunit OS=Arabidopsis thaliana GN=F8A5.14 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.404e-36
Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+++   + A+ELV  CP  VFDIED+G+GR+RATV  PR C+LCRECIR G EWED+V LRRVK+HFIFTIESTG+ PP+VLF +AVKILEDKCERVI+ELS
Sbjct:  283 LLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCERVISELS 385

[Close]

BLAST of ES560273 vs. TrEMBL
Match: D7KWR8_ARALY (ATRPAC43 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475268 PE=4 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.069e-34
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+++   + A+ELV  CP  VFDIED+G+GR+RATV  PR C+LCRECIR G EW  +V LRRVK+HFIFTIESTG+ PPDVLF +AVKILEDKCERVI+ELS
Sbjct:  283 LLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKCERVISELS 385

[Close]

BLAST of ES560273 vs. TrEMBL
Match: C5XXF5_SORBI (Putative uncharacterized protein Sb04g006420 OS=Sorghum bicolor GN=Sb04g006420 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.382e-34
Identity = 70/103 (67.96%), Postives = 87/103 (84.47%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            +++D+  + A+ELV KCPVNVFDIED+G G +RA V  PRACTLCREC+ G     ++V LRRV+DHFIFTIESTGA+PP+VLFT+AVKILE+KCERVI+ELS
Sbjct:  270 ILKDIEGDDAEELVKKCPVNVFDIEDLGNGGKRAVVAKPRACTLCRECVMGPNG--NQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCERVISELS 370

[Close]

BLAST of ES560273 vs. TrEMBL
Match: Q10MU2_ORYSJ (Os03g0295400 protein OS=Oryza sativa subsp. japonica GN=Os03g0295400 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.001e-32
Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGK-----EWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L E+++D  A+ LV KCPVNVFDIED+G G +RA V  PRACTLCR+C+ G          ++V LRRV+DHFIFTIESTGA+PP++LFT+AV+ILE+KCERVI+ELS
Sbjct:  272 LREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCRQCVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFTEAVRILEEKCERVISELS 379

[Close]

BLAST of ES560273 vs. TrEMBL
Match: A9T5P0_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107528 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.307e-32
Identity = 68/103 (66.02%), Postives = 84/103 (81.55%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            LMED++ +LA+ELV KCP  VFDIED+G  ++ A V  PR CTLCREC+RG  +W+ RV L RVKDHFIFTIESTGA+ P+VLFT+A+KIL +KC R+ITELS
Sbjct:  260 LMEDIQGKLAEELVQKCPTGVFDIEDVGTVKK-AIVARPRNCTLCRECVRG-TDWDKRVQLTRVKDHFIFTIESTGALRPEVLFTEAIKILNEKCHRIITELS 360

[Close]

BLAST of ES560273 vs. TrEMBL
Match: B4FAR4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.106e-31
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            ++++V    A+ELV KC VNVFDIED+  G +RA V  PRACTLCREC+ G  E   +V LRRV+DHFIFTIESTG++PP+VLFT+AVKILE+KC RVI+ELS
Sbjct:  272 ILKEVEGPQAEELVNKCRVNVFDIEDLANGGKRAVVARPRACTLCRECVMGPNE--KQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILEEKCARVISELS 372

[Close]

BLAST of ES560273 vs. TAIR peptide
Match: AT1G60620.1 (| Symbols: ATRPAC43, RPAC43 | RNA polymerase I subunit 43 | chr1:22331225-22333370 FORWARD LENGTH=385)

HSP 1 Score: 153.295 bits (386), Expect = 2.984e-38
Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERVITELS 310
            L+++   + A+ELV  CP  VFDIED+G+GR+RATV  PR C+LCRECIR G EWED+V LRRVK+HFIFTIESTG+ PP+VLF +AVKILEDKCERVI+ELS
Sbjct:  283 LLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCERVISELS 385

[Close]

BLAST of ES560273 vs. TAIR peptide
Match: AT1G60850.1 (| Symbols: ATRPAC42, AAC42 | DNA-directed RNA polymerase family protein | chr1:22398078-22400155 REVERSE LENGTH=375)

HSP 1 Score: 129.798 bits (325), Expect = 3.534e-31
Identity = 62/98 (63.27%), Postives = 76/98 (77.55%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERV 295
            L  +V DELA+ LV  CP NVFDIED+GKG++RATV  PR CTLC+EC+R   +  D V L  VK+HFIF IESTG++PP+VLFT+AVKILE KCE +
Sbjct:  276 LRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVAQPRKCTLCKECVR-DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of ES560273 vs. TAIR peptide
Match: AT1G60850.2 (| Symbols: ATRPAC42, AAC42 | DNA-directed RNA polymerase family protein | chr1:22398078-22400155 REVERSE LENGTH=375)

HSP 1 Score: 129.798 bits (325), Expect = 3.534e-31
Identity = 62/98 (63.27%), Postives = 76/98 (77.55%), Query Frame = 2

Query:    2 LMEDVRDELADELVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERV 295
            L  +V DELA+ LV  CP NVFDIED+GKG++RATV  PR CTLC+EC+R   +  D V L  VK+HFIF IESTG++PP+VLFT+AVKILE KCE +
Sbjct:  276 LRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVAQPRKCTLCKECVR-DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of ES560273 vs. TAIR peptide
Match: AT2G15430.1 (| Symbols: RBP36A, RPB35.5A, NRPB3, NRPD3, NRPE3A | DNA-directed RNA polymerase family protein | chr2:6733661-6735482 FORWARD LENGTH=319)

HSP 1 Score: 50.0618 bits (118), Expect = 3.558e-7
Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 2

Query:    8 EDVRDELADE----LVTKCPVNVFDIEDIGKGRRRATVVNPRACTLCRECIRGGKEW--EDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKCERV 295
            ED+ D L+DE    L+   P  VF ++ +    R+  VV+P A T   E I+  +       + +    D FIFT+ESTGA+    L   A+ +L+ K + V
Sbjct:  198 EDMMDTLSDEEKIDLIESSPTKVFGMDPV---TRQVVVVDPEAYTYDEEVIKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAV 296

The following BLAST results are available for this feature:

BLAST of ES560273 vs. SwissProt
BLAST of ES560273 vs. TrEMBL
BLAST of ES560273 vs. TAIR peptide

BLAST of ES560273 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
RPAC1_DICDI	6.409e-18	45.83	DNA-directed RNA polymerases I and III subunit rpa...	[more]
RPAC1_BOVIN	1.578e-16	45.10	DNA-directed RNA polymerases I and III subunit RPA...	[more]
RPAC1_HUMAN	7.834e-16	43.14	DNA-directed RNA polymerases I and III subunit RPA...	[more]
RPAC1_MOUSE	2.279e-15	44.12	DNA-directed RNA polymerases I and III subunit RPA...	[more]
RPAC1_SCHPO	2.133e-13	42.05	DNA-directed RNA polymerases I and III subunit RPA...	[more]
RPAC1_YEAST	9.275e-9	35.42	DNA-directed RNA polymerases I and III subunit RPA...	[more]
RPB3_DICDI	4.603e-8	29.47	DNA-directed RNA polymerase II subunit rpb3 OS=Dic...	[more]

BLAST of ES560273 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TAS0_SOYBN	2.999e-45	85.44	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9S9W7_RICCO	9.648e-44	81.55	DNA-directed RNA polymerase I/III subunits, putati...	[more]
D7UAJ8_VITVI	5.478e-39	72.82	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GFY9_POPTR	5.128e-37	70.87	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q39216_ARATH	7.404e-36	69.90	RNA polymerase subunit OS=Arabidopsis thaliana GN=...	[more]
D7KWR8_ARALY	1.069e-34	68.93	ATRPAC43 OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
C5XXF5_SORBI	2.382e-34	67.96	Putative uncharacterized protein Sb04g006420 OS=So...	[more]
Q10MU2_ORYSJ	1.001e-32	62.96	Os03g0295400 protein OS=Oryza sativa subsp. japoni...	[more]
A9T5P0_PHYPA	1.307e-32	66.02	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
B4FAR4_MAIZE	1.106e-31	65.05	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of ES560273 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G60620.1	2.984e-38	69.90	\| Symbols: ATRPAC43, RPAC43 \| RNA polymerase I sub...	[more]
AT1G60850.1	3.534e-31	63.27	\| Symbols: ATRPAC42, AAC42 \| DNA-directed RNA poly...	[more]
AT1G60850.2	3.534e-31	63.27	\| Symbols: ATRPAC42, AAC42 \| DNA-directed RNA poly...	[more]
AT2G15430.1	3.558e-7	32.35	\| Symbols: RBP36A, RPB35.5A, NRPB3, NRPD3, NRPE3A ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009025	DNA-directed RNA polymerase, RBP11-like	SUPERFAMILY	55257	RBP11-like subunits of RNA polymerase	coord: 17..103 score: 8.2
IPR011261	DNA-directed RNA polymerase, dimerisation	PFAM	PF01193	RNA_pol_L	coord: 14..98 score: 8.6
None	No IPR available	GENE3D	3.30.1360.10	no description	coord: 10..102 score: 1.5
None	No IPR available	PANTHER	PTHR11800	DNA-DIRECTED RNA POLYMERASE	coord: 1..103 score: 1.2
None	No IPR available	PANTHER	PTHR11800:SF13	DNA-DIRECTED RNA POLYMERASE I	coord: 1..103 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 54..66 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>ES560273 ID=ES560273; Name=ES560273; organism=Cicer arietinum; type=EST; length=363bp
ACTCATGGAAGACGTTAGGGATGAGCTGGCCGACGAACTAGTAACTAAAT
GTCCAGTTAATGTCTTTGATATCGAAGATATTGGAAAAGGTAGAAGAAGG
GCTACCGTAGTCAACCCACGGGCATGCACTTTGTGTAGGGAATGCATCAG
AGGAGGGAAAGAATGGGAGGATCGTGTGTCACTGCGTCGTGTCAAAGATC
ATTTCATTTTTACAATTGAATCAACTGGAGCAATTCCACCTGATGTGCTA
TTTACTCAAGCTGTGAAGATTCTGGAAGATAAGTGCGAACGAGTGATTAC
CGAGCTTTCTTGATTCTTAATTTTGCCATCATATCCTAAAATGAACGAAA
AGATAAATGTTGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003899	DNA-directed 5'-3' RNA polymerase activity
GO:0046983	protein dimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006350	transcription

Vocabulary: **INTERPRO**
Term	Definition
IPR009025	RBP11-like_dimer
IPR011261	DNA-directed RNA polymerase, dimerisation

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