HO062547

EST Overview


Name	HO062547
Unique Name	HO062547
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	190

Libraries


Library Name	Type
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_XENTR (Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_XENLA (Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_RAT (Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_SCHPO (Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.500e-22
Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            +YP+L+PP LT   SNRVCNALALLQC+ASHP+TR  FLNAHI L+LYPFLNT SKS+PFEY
Sbjct:   65 VYPLLNPPTLTGPTSNRVCNALALLQCIASHPETRIHFLNAHITLFLYPFLNTLSKSKPFEY 126

[Close]

BLAST of HO062547 vs. SwissProt
Match: RCD1_DANRE (Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.444e-22
Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP ++PP LT  QSNRVCNALALLQCVASH +TR+ FL AHIPL+LYPFL+T SK+RPFEY
Sbjct:   72 IYPSINPPTLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 133

[Close]

BLAST of HO062547 vs. TrEMBL
Match: B9STZ0_RICCO (Cell differentiation protein rcd1, putative OS=Ricinus communis GN=RCOM_0752590 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY
Sbjct:   89 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 150

[Close]

BLAST of HO062547 vs. TrEMBL
Match: B9I150_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805875 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY
Sbjct:   90 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 151

[Close]

BLAST of HO062547 vs. TrEMBL
Match: B9GJH1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_829875 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY
Sbjct:   92 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 153

[Close]

BLAST of HO062547 vs. TrEMBL
Match: D7T815_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037697001 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.314e-27
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYPVLSPPNLTPAQSNRVCNALALLQCVASH +TR LFLNAHIPLYLYPFLNT SKSRPFEY
Sbjct:   55 IYPVLSPPNLTPAQSNRVCNALALLQCVASHSETRMLFLNAHIPLYLYPFLNTNSKSRPFEY 116

[Close]

BLAST of HO062547 vs. TrEMBL
Match: Q9LT41_ARATH (RCD1 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY
Sbjct:   80 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 141

[Close]

BLAST of HO062547 vs. TrEMBL
Match: Q8RWV5_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana GN=At3g20800 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY
Sbjct:   89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150

[Close]

BLAST of HO062547 vs. TrEMBL
Match: Q8LF62_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY
Sbjct:   89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150

[Close]

BLAST of HO062547 vs. TrEMBL
Match: D7KZW6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479606 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY
Sbjct:   89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150

[Close]

BLAST of HO062547 vs. TrEMBL
Match: C5YFQ1_SORBI (Putative uncharacterized protein Sb06g028320 OS=Sorghum bicolor GN=Sb06g028320 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.525e-25
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP LSPP L+P  SNRVCNALALLQCVASHP+TR LFLNAHIPLYLYPFLNTTSK+RPFEY
Sbjct:   91 IYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEY 152

[Close]

BLAST of HO062547 vs. TrEMBL
Match: C4IYT3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.525e-25
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IYP LSPP L+P  SNRVCNALALLQCVASHP+TR LFLNAHIPLYLYPFLNTTSK+RPFEY
Sbjct:   73 IYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEY 134

[Close]

BLAST of HO062547 vs. TAIR peptide
Match: AT3G20800.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr3:7271412-7273897 REVERSE LENGTH=316)

HSP 1 Score: 119.398 bits (298), Expect = 4.538e-28
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY
Sbjct:   89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150

[Close]

BLAST of HO062547 vs. TAIR peptide
Match: AT5G12980.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr5:4105562-4108139 REVERSE LENGTH=311)

HSP 1 Score: 114.39 bits (285), Expect = 1.460e-26
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 3

Query:    3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188
            +YP LSPP +TPAQSNRVCNALALLQCVASH DTR LFL AH+PLYLY FLNT+SKSRPFEY
Sbjct:   85 VYPALSPPTMTPAQSNRVCNALALLQCVASHTDTRMLFLKAHLPLYLYAFLNTSSKSRPFEY 146

The following BLAST results are available for this feature:

BLAST of HO062547 vs. SwissProt
BLAST of HO062547 vs. TrEMBL
BLAST of HO062547 vs. TAIR peptide

BLAST of HO062547 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RCD1_XENTR	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Xenop...	[more]
RCD1_XENLA	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Xenop...	[more]
RCD1_RAT	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Rattu...	[more]
RCD1_PONAB	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Pongo...	[more]
RCD1_MOUSE	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Mus m...	[more]
RCD1_MACFA	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Macac...	[more]
RCD1_HUMAN	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Homo ...	[more]
RCD1_BOVIN	6.733e-23	77.42	Cell differentiation protein RCD1 homolog OS=Bos t...	[more]
RCD1_SCHPO	1.500e-22	75.81	Cell differentiation protein rcd1 OS=Schizosacchar...	[more]
RCD1_DANRE	7.444e-22	75.81	Cell differentiation protein RCD1 homolog OS=Danio...	[more]

BLAST of HO062547 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9STZ0_RICCO	1.963e-28	96.77	Cell differentiation protein rcd1, putative OS=Ric...	[more]
B9I150_POPTR	1.963e-28	96.77	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GJH1_POPTR	1.963e-28	96.77	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T815_VITVI	6.314e-27	93.55	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9LT41_ARATH	1.191e-25	90.32	RCD1 OS=Arabidopsis thaliana PE=4 SV=1	[more]
Q8RWV5_ARATH	1.191e-25	90.32	Putative cell differentiation protein OS=Arabidops...	[more]
Q8LF62_ARATH	1.191e-25	90.32	Putative cell differentiation protein OS=Arabidops...	[more]
D7KZW6_ARALY	1.191e-25	90.32	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C5YFQ1_SORBI	4.525e-25	87.10	Putative uncharacterized protein Sb06g028320 OS=So...	[more]
C4IYT3_MAIZE	4.525e-25	87.10	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of HO062547 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G20800.1	4.538e-28	90.32	\| Symbols: \| Cell differentiation, Rcd1-like prot...	[more]
AT5G12980.1	1.460e-26	83.87	\| Symbols: \| Cell differentiation, Rcd1-like prot...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007216	Cell differentiation, Rcd1-like	PANTHER	PTHR12262	UNCHARACTERIZED	coord: 1..62 score: 3.4
IPR007216	Cell differentiation, Rcd1-like	PFAM	PF04078	Rcd1	coord: 1..62 score: 4.3

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO062547 ID=HO062547; Name=HO062547; organism=Cicer arietinum; type=EST; length=190bp
CAATATACCCAGTTCTGTCACCACCCAATCTGACTCCAGCACAATCAAAT
AGAGTGTGCAATGCCCTTGCTCTACTCCAGTGTGTAGCATCTCACCCTGA
TACAAGGACGCTGTTCCTCAATGCTCACATTCCATTGTATCTGTATCCCT
TCCTCAACACAACAAGCAAGTCAAGGCCTTTTGAGTACCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR007216	CNOT9

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