HO062547
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062547 vs. SwissProt
Match: RCD1_XENTR (Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_XENLA (Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_RAT (Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.733e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASHP+TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 73 IYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 134
BLAST of HO062547 vs. SwissProt
Match: RCD1_SCHPO (Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.500e-22 Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 +YP+L+PP LT SNRVCNALALLQC+ASHP+TR FLNAHI L+LYPFLNT SKS+PFEY Sbjct: 65 VYPLLNPPTLTGPTSNRVCNALALLQCIASHPETRIHFLNAHITLFLYPFLNTLSKSKPFEY 126
BLAST of HO062547 vs. SwissProt
Match: RCD1_DANRE (Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.444e-22 Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP ++PP LT QSNRVCNALALLQCVASH +TR+ FL AHIPL+LYPFL+T SK+RPFEY Sbjct: 72 IYPSINPPTLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPFLHTVSKTRPFEY 133
BLAST of HO062547 vs. TrEMBL
Match: B9STZ0_RICCO (Cell differentiation protein rcd1, putative OS=Ricinus communis GN=RCOM_0752590 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY Sbjct: 89 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 150
BLAST of HO062547 vs. TrEMBL
Match: B9I150_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805875 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY Sbjct: 90 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 151
BLAST of HO062547 vs. TrEMBL
Match: B9GJH1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_829875 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.963e-28 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYPVLSPPNL+PAQSNRVCNALALLQCVASHPDTR LFLNAHIPLYLYPFLNTTSKSRPFEY Sbjct: 92 IYPVLSPPNLSPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEY 153
BLAST of HO062547 vs. TrEMBL
Match: D7T815_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037697001 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.314e-27 Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYPVLSPPNLTPAQSNRVCNALALLQCVASH +TR LFLNAHIPLYLYPFLNT SKSRPFEY Sbjct: 55 IYPVLSPPNLTPAQSNRVCNALALLQCVASHSETRMLFLNAHIPLYLYPFLNTNSKSRPFEY 116
BLAST of HO062547 vs. TrEMBL
Match: Q9LT41_ARATH (RCD1 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY Sbjct: 80 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 141
BLAST of HO062547 vs. TrEMBL
Match: Q8RWV5_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana GN=At3g20800 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY Sbjct: 89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150
BLAST of HO062547 vs. TrEMBL
Match: Q8LF62_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY Sbjct: 89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150
BLAST of HO062547 vs. TrEMBL
Match: D7KZW6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479606 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.191e-25 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY Sbjct: 89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150
BLAST of HO062547 vs. TrEMBL
Match: C5YFQ1_SORBI (Putative uncharacterized protein Sb06g028320 OS=Sorghum bicolor GN=Sb06g028320 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.525e-25 Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP LSPP L+P SNRVCNALALLQCVASHP+TR LFLNAHIPLYLYPFLNTTSK+RPFEY Sbjct: 91 IYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEY 152
BLAST of HO062547 vs. TrEMBL
Match: C4IYT3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.525e-25 Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IYP LSPP L+P SNRVCNALALLQCVASHP+TR LFLNAHIPLYLYPFLNTTSK+RPFEY Sbjct: 73 IYPSLSPPTLSPGASNRVCNALALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEY 134
BLAST of HO062547 vs. TAIR peptide
Match: AT3G20800.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr3:7271412-7273897 REVERSE LENGTH=316) HSP 1 Score: 119.398 bits (298), Expect = 4.538e-28 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 IY VL+PPNLTPAQSNRVCN+LALLQCVASH DTR LFL AHIPLYLYPFLNTTSKSRPFEY Sbjct: 89 IYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEY 150
BLAST of HO062547 vs. TAIR peptide
Match: AT5G12980.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr5:4105562-4108139 REVERSE LENGTH=311) HSP 1 Score: 114.39 bits (285), Expect = 1.460e-26 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 3 Query: 3 IYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKSRPFEY 188 +YP LSPP +TPAQSNRVCNALALLQCVASH DTR LFL AH+PLYLY FLNT+SKSRPFEY Sbjct: 85 VYPALSPPTMTPAQSNRVCNALALLQCVASHTDTRMLFLKAHLPLYLYAFLNTSSKSRPFEY 146 The following BLAST results are available for this feature:
BLAST of HO062547 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of HO062547 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062547 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062547 ID=HO062547; Name=HO062547; organism=Cicer arietinum; type=EST; length=190bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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