GR410116
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR410116 vs. TrEMBL
Match: C6SVW2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.558e-17 Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + G+ RPT++CKD+GPC+QKKVTCPA+CFSSFS S GC IDCK KCIAYC Sbjct: 109 KGGIIRPTVVCKDKGPCFQKKVTCPAKCFSSFSRSGKGYGGGGGGGGCTIDCKKKCIAYC 168
BLAST of GR410116 vs. TrEMBL
Match: C6TKQ7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.289e-16 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + G+ RPT++CKD+GPC+QKKVTCPA+CFSSFS S GC +DCK KCIAYC Sbjct: 87 KGGIIRPTVLCKDKGPCFQKKVTCPAKCFSSFSRSGKGYGAGGGGGGCTVDCKKKCIAYC 146
BLAST of GR410116 vs. TrEMBL
Match: B9S5Z9_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1062760 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.416e-15 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + G+ RPT++CK++GPCY+KK+TCPA+CF+S+S S GC +DCK KCIAYC Sbjct: 88 KGGIIRPTVVCKEKGPCYKKKLTCPAKCFTSYSRSGKGYGGGGGGGGCTMDCKKKCIAYC 147
BLAST of GR410116 vs. TrEMBL
Match: B9HYY5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568278 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.576e-14 Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + GV +P+++CK++GPCY+KK+TCPA+CF+S+S S GC IDCK KC+AYC Sbjct: 83 KGGVIKPSVVCKEKGPCYKKKLTCPAKCFTSYSRSGKGYGGGGGGGGCTIDCKKKCVAYC 142
BLAST of GR410116 vs. TrEMBL
Match: Q9FRF5_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g47270 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.688e-14 Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 R GV PT++C D+GPCY+KKVTCP +CFSS+S S GC IDCK KC AYC Sbjct: 105 RGGVVVPTVVCSDKGPCYRKKVTCPKKCFSSYSSSGKGYGGGGGGGGCTIDCKTKCTAYC 164
BLAST of GR410116 vs. TrEMBL
Match: A2XKL2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12992 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.688e-14 Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 R GV PT++C D+GPCY+KKVTCP +CFSS+S S GC IDCK KC AYC Sbjct: 105 RGGVVVPTVVCSDKGPCYRKKVTCPKKCFSSYSSSGKGYGGGGGGGGCTIDCKTKCTAYC 164
BLAST of GR410116 vs. TrEMBL
Match: D7MER6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914508 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.334e-13 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + GV RPT+ C+++GPCY KK+ CPA+CF SFS S GC +DCK KCIAYC Sbjct: 72 KGGVVRPTVTCREKGPCYGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTMDCKKKCIAYC 131
BLAST of GR410116 vs. TrEMBL
Match: B9H241_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555520 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.334e-13 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 R GV RP+++CK+RGPCY+KK+TCPA+CF+S S S GC +DCK KC+AYC Sbjct: 90 RGGVVRPSVVCKERGPCYKKKLTCPAKCFTSHSRSGKGYGGGGGGGGCTLDCK-KCVAYC 148
BLAST of GR410116 vs. TrEMBL
Match: Q9SVT5_ARATH (AT4g21620/F17L22_80 OS=Arabidopsis thaliana GN=AT4g21620 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.621e-13 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + GV RPT+ CK++GPC KK+ CPA+CF SFS S GC +DCK KCIAYC Sbjct: 72 KGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTMDCKKKCIAYC 131
BLAST of GR410116 vs. TrEMBL
Match: C4J5G4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.129e-12 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 R GV PT+ C ++GPCY+KKVTCP +CFSS+S + C +DCK KC AYC Sbjct: 106 RGGVVAPTVTCSEKGPCYRKKVTCPKKCFSSYSGAGKGYGGGGGGGSCTVDCKVKCTAYC 165
BLAST of GR410116 vs. TAIR peptide
Match: AT4G21620.2 (| Symbols: | glycine-rich protein | chr4:11491519-11491914 FORWARD LENGTH=98) HSP 1 Score: 77.0258 bits (188), Expect = 5.433e-15 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + GV RPT+ CK++GPC KK+ CPA+CF SFS S GC +DCK KCIAYC Sbjct: 39 KGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTMDCKKKCIAYC 98
BLAST of GR410116 vs. TAIR peptide
Match: AT4G21620.1 (| Symbols: | glycine-rich protein | chr4:11491519-11491914 FORWARD LENGTH=131) HSP 1 Score: 77.0258 bits (188), Expect = 5.433e-15 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 46 RNGVTRPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 225 + GV RPT+ CK++GPC KK+ CPA+CF SFS S GC +DCK KCIAYC Sbjct: 72 KGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTMDCKKKCIAYC 131
BLAST of GR410116 vs. TAIR peptide
Match: AT1G61255.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:22589260-22589691 REVERSE LENGTH=143) HSP 1 Score: 58.9214 bits (141), Expect = 1.531e-9 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = -2 Query: 46 RPTIICKDRGPCYQKKVTCPARCFSSFSHSXXXXXXXXXXXGCNIDCKNKCIAYC 210 R T++C+++G CY KK+TCPA+CF S S GC IDCK KC+AYC Sbjct: 92 RLTVMCEEKGHCYMKKLTCPAKCFKSLSRK--GKGYGGGGGGCTIDCK-KCVAYC 143 The following BLAST results are available for this feature:
BLAST of GR410116 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR410116 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR410116 ID=GR410116; Name=GR410116; organism=Cicer arietinum; type=EST; length=478bpback to top |