HO066089

EST Overview


Name	HO066089
Unique Name	HO066089
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	848

Libraries


Library Name	Type
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..18 score: NAcoord: 38..48 score: NAcoord: 49..60 score: NAcoord: 65..83 score: NAcoord: 85..94 score: NAcoord: 116..129 score: NAcoord: 140..157 score: NAcoord: 167..178 score: NAcoord: 180..191 score: NAcoord: 193..203 score: NAcoord: 206..251 score
None	No IPR available	SEG	seg	seg	coord: 6..16 score: NAcoord: 20..29 score: NAcoord: 35..46 score: NAcoord: 48..58 score: NAcoord: 71..83 score: NAcoord: 86..105 score: NAcoord: 122..132 score: NAcoord: 139..146 score: NAcoord: 148..160 score: NAcoord: 173..183 score
None	No IPR available	SEG	seg	seg	coord: 7..14 score: NAcoord: 20..28 score: NAcoord: 31..41 score: NAcoord: 52..69 score
None	No IPR available	SEG	seg	seg	coord: 4..19 score: NAcoord: 22..34 score: NAcoord: 41..47 score: NAcoord: 57..74 score: NAcoord: 85..93 score: NAcoord: 95..104 score: NAcoord: 106..117 score: NAcoord: 132..147 score
None	No IPR available	SEG	seg	seg	coord: 9..27 score: NAcoord: 31..45 score: NAcoord: 46..59 score
None	No IPR available	SEG	seg	seg	coord: 2..15 score: NAcoord: 27..33 score: NAcoord: 40..51 score
None	No IPR available	SEG	seg	seg	coord: 2..16 score: NAcoord: 18..30 score: NAcoord: 32..42 score: NAcoord: 58..66 score: NAcoord: 76..88 score: NAcoord: 90..108 score: NAcoord: 115..125 score: NAcoord: 129..136 score
None	No IPR available	SEG	seg	seg	coord: 5..15 score: NAcoord: 17..25 score: NAcoord: 26..45 score: NAcoord: 48..60 score
None	No IPR available	SEG	seg	seg	coord: 2..11 score: NAcoord: 16..22 score: NAcoord: 30..40 score: NAcoord: 42..51 score: NAcoord: 54..61 score: NAcoord: 71..80 score
None	No IPR available	SEG	seg	seg	coord: 7..18 score: NAcoord: 24..39 score: NAcoord: 46..61 score: NAcoord: 63..73 score: NAcoord: 74..82 score: NAcoord: 99..128 score: NAcoord: 137..146 score: NAcoord: 148..158 score
None	No IPR available	SEG	seg	seg	coord: 2..15 score: NAcoord: 31..36 score: NAcoord: 38..44 score: NAcoord: 47..56 score
None	No IPR available	SEG	seg	seg	coord: 1..16 score: NAcoord: 22..40 score: NAcoord: 50..63 score: NAcoord: 65..74 score: NAcoord: 77..83 score: NAcoord: 94..103 score: NAcoord: 105..114 score: NAcoord: 119..130 score
None	No IPR available	SEG	seg	seg	coord: 21..27 score: NAcoord: 31..42 score
IPR001190	Speract/scavenger receptor	PROFILE	PS50287	SRCR_2	coord: 8..162 score: 7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066089 ID=HO066089; Name=HO066089; organism=Cicer arietinum; type=EST; length=848bp
TNNATAANNNNGNNCNTNTTNNNANGCNNTNTNATGTTCNNCGNNCCNGC
CNCTNATTANAANNCCNANTNTTGTANACTACTNCCNTGATNAGTGTNNN
TTNATANNNATNGTNNNNATGGCGGCNANTGNGTNCNTTTNTNNNATATG
NNTCNGNCANNNCCGNNCACNGNNGAGTTCGTCTNNACNNNNCTANANAG
CATGTNNTGNGNCCGGTTGCCTTANGCNGNGCCCCCNNTNNCNACNGNNC
GCNGCTNTACNNNCGNTNTNNNTGTTTGNTCCGCCCNGNNNTCCNNGTGN
AGNANCAGCNANAAAGTNTNNTCCNGNANNCNNNNCTCCNANTACNTGTT
NANNNATANTGNGGACCCGNAACCNGCCCNNCTNATATANTGNCTGGNAA
GNGACCGNNNNATGTCANANNTTCTGGCNCGGTNNGTGTNGNNNTNNNCN
NANNGTNNNNTGNGCANNGAANCNANCTNGACTAGNNATACTTTNGNNCA
NNTTATGCTCGANNAGNNNNGCNNTNATANCNATNNNNAAANATNANNAN
NNCATNTTGNNNNCCGNNNCGNGNCATTNATCANTNNNAAGTNANNGANG
NCNCNATNCNTGANNNNNATNGGGGGCTATTNCNCNTTGGNTNNGNAGTG
NNCNNNCTNNNTNNGAACNTNGNCACATGANTNTNNTNGCTNNNCGANAG
NNGAANGAGCATANTGNCCCNNTCCNCTNTNNGNGGGNNTNCTNGTCCNC
GNAGTGGANGNGGGCTTNNTNCGCGCNGNNAGANANNNGTANNNGGTGCG
NGNCGGNCNNNCANNNNNTGNGNCNNTNNGCCNATNCNTNGNTCTGNG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005044	scavenger receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001190	SRCR

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