GR406712
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406712 vs. SwissProt
Match: VIPI_SCHPO (Protein vip1 OS=Schizosaccharomyces pombe GN=vip1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 7.713e-7 Identity = 36/140 (25.71%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 224 NTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAED----VVTSMLAKGFILGKDAVNKAKGFDEKHKLTS 631 N + V+N+S +E+ I +FFSF G + + + E +Q A + F+ P ++TA+LL A + + IT + AS+ +G G D A R+ + +++ +L++G+ L + K+ D+ + ++S Sbjct: 3 NQVIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDALLGQNKIQITSE------DGGAASTTDQG--GAGGDQAARQEDKPRSAIISELLSRGYHLSDVTLEKSIQLDQSYGVSS 133
BLAST of GR406712 vs. TrEMBL
Match: C6TAU1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.203e-64 Identity = 125/150 (83.33%), Postives = 140/150 (93.33%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M++ T+KVSNVSLGA+EQDIKEFFSFSGDIEYVE++SHDERSQIAY+TFKD QG+ETA+LLSGATIVD+ V IT DPDY+LPPAALASSV E +TPGGADSALRKAEDVV+ MLAKGFILGKDAVNKAK FDEKH+L+STASAKV SFDQ Sbjct: 1 MTMKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELRSHDERSQIAYITFKDSQGAETALLLSGATIVDMPVTITRDPDYQLPPAALASSVRETQTPGGADSALRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASFDQ 150
BLAST of GR406712 vs. TrEMBL
Match: C6TJQ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.915e-62 Identity = 123/151 (81.46%), Postives = 139/151 (92.05%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTP-GGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M++ T+KVSNVSLGA+EQDIKEFFSFSGDIEYVE++SHDERSQIA++TFKD QG+ETAVLLSGATIVD+ V I+LDPDY+LPPAALAS V E +TP GGADSA RKAEDVV+ MLAKGFILGKDAVNKAK FDEKH+L+STASAKV SFDQ Sbjct: 1 MTIKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELQSHDERSQIAFITFKDSQGAETAVLLSGATIVDMPVTISLDPDYQLPPAALASPVRETRTPGGGADSAFRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSSTASAKVASFDQ 151
BLAST of GR406712 vs. TrEMBL
Match: B7FIB3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.653e-61 Identity = 122/150 (81.33%), Postives = 134/150 (89.33%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 MS+ T+KV NVSLGA+E+DI+EFFSFSGDI YVE++SHDERSQ AYVTFKD QG+ETAVLLSGATIVDLSVNITLDPDY+LPP AL S V+E KTPGGADSALRKAEDVVTSM AKGFILGKDAVNKAK FDEK +L+S ASA V S DQ Sbjct: 1 MSIKTVKVGNVSLGATERDIQEFFSFSGDIAYVELRSHDERSQTAYVTFKDSQGAETAVLLSGATIVDLSVNITLDPDYQLPPEALVSPVSESKTPGGADSALRKAEDVVTSMAAKGFILGKDAVNKAKTFDEKLQLSSKASATVASVDQ 150
BLAST of GR406712 vs. TrEMBL
Match: A9PE83_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 4.786e-60 Identity = 120/150 (80.00%), Postives = 133/150 (88.67%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 MSV T+KVSNVSLGASE+D+KEFFSFSGDIEYVEMKS +ERSQIAYVTFKD QG++TAVLLSGATIVDLSV + LDPDY+LPPAALA G G +SALRKAEDVV+ MLAKGFILGKDA+NKAKGFDEKH+LTSTASAKV SFD+ Sbjct: 1 MSVKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLLSGATIVDLSVTVALDPDYQLPPAALAELSATGNKAPGDESALRKAEDVVSGMLAKGFILGKDAINKAKGFDEKHQLTSTASAKVVSFDK 150
BLAST of GR406712 vs. TrEMBL
Match: B9SRC6_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0614010 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.102e-59 Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M V T+KVSNVSLGA+E+D++EFFSFSGDIEYVE++ DE+SQIAYVT+KD QG+ETAVLLSGATIVDLSV+ITLDPDY+LPPA VT+ KTPGGA+SALRKAEDVVTSMLAKGFILGKDAVNKAK FD+KH+LTSTASAKV S D+ Sbjct: 1 MRVRTVKVSNVSLGATERDLREFFSFSGDIEYVEVRRDDEKSQIAYVTYKDSQGAETAVLLSGATIVDLSVSITLDPDYQLPPA-----VTQNKTPGGAESALRKAEDVVTSMLAKGFILGKDAVNKAKTFDDKHQLTSTASAKVVSLDK 145
BLAST of GR406712 vs. TrEMBL
Match: B9MU59_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_423740 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.102e-59 Identity = 118/150 (78.67%), Postives = 132/150 (88.00%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 + V T+KVSNVSLGASE+D+KEFFSFSGDIEYVEMKS +ERSQIAYVTFKD QG++TAVLLSGATIVDLSV + LDPDY+LPPAALA G G +SALRKAEDVV+ MLAKGFILGKDA+NKAKGFDEKH+LTSTASAKV SFD+ Sbjct: 1 LQVKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLLSGATIVDLSVTVALDPDYQLPPAALAELSATGNKAPGDESALRKAEDVVSGMLAKGFILGKDAINKAKGFDEKHQLTSTASAKVVSFDK 150
BLAST of GR406712 vs. TrEMBL
Match: B9GZI4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646278 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.291e-59 Identity = 119/150 (79.33%), Postives = 133/150 (88.67%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 MSV T+KVSNVSLGASEQD+KEFFSFSGDIEYVEMKS +E+SQIAYV+FKD QG++TAVLLSGATIVDL V +TLDPDY+LPPAALA+ TE K P +SAL KAEDVVT MLAKGFILGKDA+NKAK FDEKH+LTSTASAKV S D+ Sbjct: 5 MSVKTVKVSNVSLGASEQDLKEFFSFSGDIEYVEMKSENEQSQIAYVSFKDSQGADTAVLLSGATIVDLPVTVTLDPDYQLPPAALAALATENKAPSD-ESALHKAEDVVTGMLAKGFILGKDAINKAKSFDEKHQLTSTASAKVASLDK 153
BLAST of GR406712 vs. TrEMBL
Match: D7TTS9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013098001 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.635e-55 Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASS--VTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M + T+KVSNVSLGA+EQDIKEFFSFSGDIE VEM+S +ERSQIAYVTFKD QG+ETA+LLSGATIVD+SV IT PDY+LPPAA ++ E KTPG A+SA RK EDVV+ MLAKG+ILGKDAVNKAK FDEKH+LTSTA++KV SFD+ Sbjct: 1 MPITTVKVSNVSLGATEQDIKEFFSFSGDIECVEMQSDNERSQIAYVTFKDMQGAETAILLSGATIVDMSVTITPAPDYQLPPAAASAPPLPKENKTPGRAESAFRKTEDVVSGMLAKGYILGKDAVNKAKSFDEKHQLTSTATSKVVSFDK 152
BLAST of GR406712 vs. TrEMBL
Match: B9S228_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1326600 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.491e-53 Identity = 109/151 (72.19%), Postives = 129/151 (85.43%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAA-LASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M++ T+KVSNVSLGA+EQDIKEFFSFSGDI+YVE+ +ERSQIAYVTFKD QG+ETAVLLSGATIVD SV I L PDY+LP AA + ++ TE T GA+SA +KAED+V+SMLAKGFILGKDAVNKAK FDEKH+ TSTA++KV S D+ Sbjct: 1 MAITTVKVSNVSLGATEQDIKEFFSFSGDIDYVELLGDNERSQIAYVTFKDQQGAETAVLLSGATIVDQSVTIELAPDYKLPAAASVPTTATESSTASGAESAFQKAEDIVSSMLAKGFILGKDAVNKAKAFDEKHQFTSTATSKVASLDE 151
BLAST of GR406712 vs. TrEMBL
Match: D7T7N4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024381001 PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.262e-52 Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAA-LASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M+++T+KVSNVSLGASEQDIKEFFSFSG+IEYVEM+S +ERSQ+AYVTFKD QG+ETAVLLSGATIVD+SV I PDY+LP AA + TE G +S L+KAEDVV+ MLAKGFILGKDA+NKAK FDE+H+ TSTASAKV S DQ Sbjct: 1 MAISTVKVSNVSLGASEQDIKEFFSFSGEIEYVEMQSENERSQVAYVTFKDTQGAETAVLLSGATIVDMSVIIAPAPDYKLPAAASVQPRATENTNVGAGESPLQKAEDVVSGMLAKGFILGKDALNKAKSFDERHQFTSTASAKVVSLDQ 151
BLAST of GR406712 vs. TAIR peptide
Match: AT4G17720.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:9862660-9864498 REVERSE LENGTH=313) HSP 1 Score: 199.134 bits (505), Expect = 1.964e-51 Identity = 104/152 (68.42%), Postives = 126/152 (82.89%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALAS--SVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M++ T+KVSNVSLGA+++D+KEFFSFSGDI Y+E +S ER+++AYVTFKD QG+ETAVLLSGATIVD SV +++ PDY+L P ALAS K+P DS LRKAEDVV+SMLAKGFILGKDA+ KAK DEKH+LTSTASAKV SFD+ Sbjct: 1 MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDK 152
BLAST of GR406712 vs. TAIR peptide
Match: AT5G46870.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:19015486-19016990 FORWARD LENGTH=295) HSP 1 Score: 187.963 bits (476), Expect = 4.527e-48 Identity = 98/156 (62.82%), Postives = 125/156 (80.13%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALAS-----SVTEGKTPGGAD-SALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 MS+ T+KVSNVSL A+E+D+KEFFSFSGDI Y+E +S ++ S++AYVTFKD QG+ETAVLL+G+TIVD SV +T+ PDY+LPP ALAS + +P D S RKAEDVV+ M++KGF+LGKDA+ KAK DEKH+LTSTASA+VTSFD+ Sbjct: 1 MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDK 156
BLAST of GR406712 vs. TAIR peptide
Match: AT5G16840.2 (| Symbols: BPA1 | binding partner of acd11 1 | chr5:5536042-5538026 FORWARD LENGTH=260) HSP 1 Score: 163.696 bits (413), Expect = 9.142e-41 Identity = 90/148 (60.81%), Postives = 112/148 (75.68%), Query Frame = 2 Query: 221 VNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 V ++KV N+S GA+E DIKEFFSFSG++E ++++S +E S AYVTFK+ QG+ETAVLLSGA+I D SV I L P+Y P A A + + G A+S ++KAEDVV+SMLAKGFILGKDAV KAK FDEKH TSTA+A V S DQ Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLLSGASIADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQ 145
BLAST of GR406712 vs. TAIR peptide
Match: AT1G67950.3 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:25478884-25480420 REVERSE LENGTH=279) HSP 1 Score: 163.31 bits (412), Expect = 1.194e-40 Identity = 84/147 (57.14%), Postives = 109/147 (74.15%), Query Frame = 2 Query: 221 VNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFD 661 V T+K+SNVSL S++D+KEFFSFSGDI+YVEM+S + SQ+AYVTFKD QG+ETA+LL+GA I DL V+IT +Y+LPP ALA E G +++KAEDVV M+ +G+ LGKDA+ KAK FD++H L S ASA + S D Sbjct: 28 VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALDSQEHSFNG---FSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLD 171
BLAST of GR406712 vs. TAIR peptide
Match: AT5G16840.3 (| Symbols: BPA1 | binding partner of acd11 1 | chr5:5536042-5538026 FORWARD LENGTH=257) HSP 1 Score: 162.925 bits (411), Expect = 1.559e-40 Identity = 89/150 (59.33%), Postives = 113/150 (75.33%), Query Frame = 2 Query: 215 MSVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 M+V ++KV N+S GA+E DIKEFFSFSG++E ++++S++ AYVTFK+ QG+ETAVLLSGA+I D SV I L P+Y P A A + + G A+S ++KAEDVV+SMLAKGFILGKDAV KAK FDEKH TSTA+A V S DQ Sbjct: 1 MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHS---AYVTFKETQGAETAVLLSGASIADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQ 142
BLAST of GR406712 vs. TAIR peptide
Match: AT5G16840.1 (| Symbols: BPA1 | binding partner of acd11 1 | chr5:5536042-5538026 FORWARD LENGTH=259) HSP 1 Score: 160.614 bits (405), Expect = 7.739e-40 Identity = 88/148 (59.46%), Postives = 111/148 (75.00%), Query Frame = 2 Query: 221 VNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 V ++KV N+S GA+E DIKEFFSFSG++E ++++S++ AYVTFK+ QG+ETAVLLSGA+I D SV I L P+Y P A A + + G A+S ++KAEDVV+SMLAKGFILGKDAV KAK FDEKH TSTA+A V S DQ Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHS---AYVTFKETQGAETAVLLSGASIADQSVIIELAPNYSPPAAPHAETQSSG-----AESVVQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQ 144
BLAST of GR406712 vs. TAIR peptide
Match: AT1G67950.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:25478884-25480072 REVERSE LENGTH=279) HSP 1 Score: 160.229 bits (404), Expect = 1.011e-39 Identity = 84/147 (57.14%), Postives = 110/147 (74.83%), Query Frame = 2 Query: 221 VNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFD 661 V T+K+SNVSL S++D+KEFFSFSGDI+YVEM+S + SQ+AYVTFKD QG+ETA+LL+GA I DL V+IT +Y+LPP ALA +E G +++KAEDVV M+ +G+ LGKDA+ KAK FD++H L S ASA + S D Sbjct: 29 VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALD-SEHSFNG---FSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLD 171
BLAST of GR406712 vs. TAIR peptide
Match: AT1G67950.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:25478884-25480420 REVERSE LENGTH=278) HSP 1 Score: 160.229 bits (404), Expect = 1.011e-39 Identity = 84/147 (57.14%), Postives = 110/147 (74.83%), Query Frame = 2 Query: 221 VNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFD 661 V T+K+SNVSL S++D+KEFFSFSGDI+YVEM+S + SQ+AYVTFKD QG+ETA+LL+GA I DL V+IT +Y+LPP ALA +E G +++KAEDVV M+ +G+ LGKDA+ KAK FD++H L S ASA + S D Sbjct: 28 VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALD-SEHSFNG---FSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLD 170
BLAST of GR406712 vs. TAIR peptide
Match: AT5G32450.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:12079707-12081317 FORWARD LENGTH=267) HSP 1 Score: 139.428 bits (350), Expect = 1.846e-33 Identity = 80/164 (48.78%), Postives = 110/164 (67.07%), Query Frame = 2 Query: 218 SVNTIKVSNVSLGASEQDIKEFFSFSGDIEYVEMKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDY-------------RLPPAALASSVTEGKT--PGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFDQ 664 + +++V+NVS A+E++I EFFSFSGDIE++E++ +S+IA+VTF DP+ E A+LLSGATIVD V IT +Y P L S T+ KT G + + + KA+DVV ++LAKG LG+DAVNKAK FDEKH+L + ASAKV+SFD+ Sbjct: 3 TTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDK 166
BLAST of GR406712 vs. TAIR peptide
Match: AT1G67950.4 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:25478884-25479778 REVERSE LENGTH=219) HSP 1 Score: 112.849 bits (281), Expect = 1.851e-25 Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 317 MKSHDERSQIAYVTFKDPQGSETAVLLSGATIVDLSVNITLDPDYRLPPAALASSVTEGKTPGGADSALRKAEDVVTSMLAKGFILGKDAVNKAKGFDEKHKLTSTASAKVTSFD 661 M+S + SQ+AYVTFKD QG+ETA+LL+GA I DL V+IT +Y+LPP ALA +E G +++KAEDVV M+ +G+ LGKDA+ KAK FD++H L S ASA + S D Sbjct: 1 MRSETQESQVAYVTFKDSQGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALD-SEHSFNG---FSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLD 111 The following BLAST results are available for this feature:
BLAST of GR406712 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR406712 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR406712 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406712 ID=GR406712; Name=GR406712; organism=Cicer arietinum; type=EST; length=716bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|