HO065885

EST Overview


Name	HO065885
Unique Name	HO065885
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	658

Libraries


Library Name	Type
LIBEST_026412 Chickpea drought stressed cDNA SSH library AS1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 21..32 score: NAcoord: 55..93 score: NAcoord: 123..136 score
None	No IPR available	SEG	seg	seg	coord: 28..49 score
None	No IPR available	SEG	seg	seg	coord: 1..44 score
None	No IPR available	SEG	seg	seg	coord: 4..13 score: NAcoord: 15..25 score: NAcoord: 46..62 score: NAcoord: 66..82 score: NAcoord: 96..117 score
None	No IPR available	SEG	seg	seg	coord: 16..80 score: NAcoord: 88..103 score
None	No IPR available	SEG	seg	seg	coord: 13..34 score
None	No IPR available	SEG	seg	seg	coord: 10..33 score: NAcoord: 46..56 score
None	No IPR available	SEG	seg	seg	coord: 11..59 score: NAcoord: 72..82 score: NAcoord: 101..111 score
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 99..117 score: 1.8
IPR000167	Dehydrin	PROSITE	PS00823	DEHYDRIN_2	coord: 110..117 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO065885 ID=HO065885; Name=HO065885; organism=Cicer arietinum; type=EST; length=658bp
ATAAACGAACATGNATATTTTATTCNTATCCNTTATTATACTCCATACAT
ATATCTAATTTCTATGACATGGTAATAACAAACNTTACATACATATACAA
AGCAAATTACTCAAAACTAAAACTTTCAAAATAAACCAATACACACCTAT
TTTTTATTTAATTATTATATATCATATCATATGNNTGNGTCCNTATTATA
GANATTATTATTATGATTANGATATCTAGNGGCCTGNCCCAGGAAGTTTC
TCCTTAATCTTATCCATAANCCCTTTCTTCNCNCCNTGNTTTTGNTCNCC
NCCNTGANGNNGAGCCNCCNCTCNNCCAAANTCTTGNCCCANTTTTGTTC
CATAACCNCTTCCAGGGGNTGGGNTTCCATAACCACCTGGGNTGGTCCCA
TAANTACCTGGGNTGGNCCCATAACNACCTGGGTTGGGGGNCCCNNAANC
TGNTGGGGGTNGNNCAACNCCNTGNNGNTTACCGGNATCNTCGGGTGNTC
CANATANTTTACCGACNGGACCGGTCATTCCNCCNCCACCNCCATGGGNA
TTGGGAGGGCACATNANCATCNCCNGTGCCACCNCCCACTACCTGNGGGG
GGCCCANAACTAGGGGGNGGGGGGAAATTTGAATNATCTCCATGTTTATG
GGGGGCTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress
GO:0009415	response to water

Vocabulary: **INTERPRO**
Term	Definition
IPR000167	Dehydrin

Search form