HO067920

EST Overview
NameHO067920
Unique NameHO067920
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length621
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO067920 vs. TrEMBL
Match: A2Q241_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC149207g24v2 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.517e-44
Identity = 95/164 (57.93%), Postives = 117/164 (71.34%), Query Frame = 1
Query:  121 AEATAESPSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMNSFEMHLIHAPAVPQXXXXXXXXXXXXXXXXXXXXKQSMMNLVAQLDNLLIIVRSLKGNLETIKVDMQALKDRMKCLENFLQIYLKNATASSS 612
            A+ATAESP+T+LP ELMIEIL+RV+S+NPLQLR VCKWWKSL+VD QFV+KHL+KS  DITDL S A +H  SF  H I      +                    K++ MN +A+LDNLL+ VRS+K  LE IKVD  A+KDRMKCLE+FL+IYLK+AT+SSS
Sbjct:    3 ADATAESPTTILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDLLSTATEHRKSFVSHQIPNQLQEEEEEDDDDDDDDEEVDEEEAAKRARMNRLAELDNLLVGVRSIKRELEIIKVDTLAMKDRMKCLESFLKIYLKSATSSSS 166          
BLAST of HO067920 vs. TrEMBL
Match: A2Q247_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC149207g29v2 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.033e-32
Identity = 86/177 (48.59%), Postives = 106/177 (59.89%), Query Frame = 1
Query:  121 AEATAESPSTV-LPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMNSF-EMHLIHAPAVPQ--------------XXXXXXXXXXXXXXXXXXXXKQSMMNLVAQLDNLLIIVRSLKGNLETIKVDM----QALKDRMKCLENFLQIYLK 591
            AEATAE P TV LPEEL+IEI+SRV+S N LQLR VCK W SLI DP+FVKKH    FTDI DL SKA++  N+F   H I+ P VPQ                                  K+ +M+LV+ +DNLL+ +R +K N ETI VDM    QAL+D MKC  +F++IYLK
Sbjct:    3 AEATAELPKTVVLPEELIIEIISRVDSRNTLQLRPVCKRWNSLITDPEFVKKHFQSLFTDIRDLTSKALEQSNAFISQHNINNPVVPQEEGEENAEEEEEDEDVAFVDEEVVAAVDEEKDELKRVLMDLVSDMDNLLVNLRFIKDNTETIHVDMQTQSQALEDIMKCFRSFVRIYLK 179          
BLAST of HO067920 vs. TrEMBL
Match: A2Q249_MEDTR (Cyclin-like F-box; Calcium-binding EF-hand OS=Medicago truncatula GN=MtrDRAFT_AC149207g31v2 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.452e-21
Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query:  121 AEATAESPSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMNSFE 345
            AE TAESP+T+LPEELMIEILSRVESSNP +LRCVCK WKSL+ D QF++ HL +SFT+IT L   A D + SF+
Sbjct:    6 AEVTAESPNTILPEELMIEILSRVESSNPQELRCVCKLWKSLVFDTQFLENHLIRSFTEITVLLVTAFDKLKSFK 80          

HSP 2 Score: 62.7734 bits (151), Expect = 2.381e-8
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  460 VAQLDNLLIIVRSLKGNLETIKVDMQALKDRMKCLENFLQIYLKNATASSS 612
            V+ LDNLL I++ LKG  ETI+ D+QA++DR+KCL+NFL  YLK++ +SSS
Sbjct:  186 VSPLDNLLKILKYLKGKFETIRDDIQAVEDRVKCLQNFLLAYLKSSKSSSS 236          
BLAST of HO067920 vs. TrEMBL
Match: A2Q238_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC149207g19v2 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.217e-20
Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 1
Query:  121 AEATAESPSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMNSFEMHLIHAPAVPQXXXXXXXXXXXXXXXXXXXXKQ--------------------------SMMNLVAQLDNLLIIVRSLKGNLETIKVDMQALKDRMKCLENFLQIYLKNATASSS 612
            AEA AE P T+LP+E+MIEILSR+++SN LQLRCVCK W SL+VD Q +K H+NK F +IT L  KA +H+N   +H    P VPQ                    ++                            M  VAQL+N++++V SLK NL            R+K ++ FL+I LK+  +SSS
Sbjct:    2 AEAMAEPPITILPKEVMIEILSRLDASNLLQLRCVCKLWNSLVVDRQVLKNHINKLFDEITVLLYKAEEHVN---LH----PVVPQEEDVEDVAEEEDEEEVEENEEEEKEEEEDAEEEGAEEEENEEEEEDTDQFMVAVAQLNNVVMLVPSLKDNLLV----------RLKGIKAFLRITLKSLKSSSS 174          
BLAST of HO067920 vs. TrEMBL
Match: A2Q240_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC149207g23v2 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.541e-20
Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  136 ESPSTV-LPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMNSFEMHLIHAPAVPQXXXXXXXXXXXXXXXXXXXXKQSMMNLVAQLDNLLIIVRSLKGNLETIKVDMQALKDRMKCLENFLQIYLKNATASS 609
            E+P+TV LPEEL+IEI+SRV+SSN LQLRCVCK W SL++D QFVKKH       I  L  K +  M++  +  I  P+VPQ                    ++       + +         +  +   K+  Q L+DR+KCL++FL+ YLK AT+SS
Sbjct:   37 ENPNTVVLPEELIIEIISRVDSSNTLQLRCVCKLWNSLVLDSQFVKKHFQVLRIYIGGLFVKTVKDMDALNLQFIRNPSVPQEEEEEEEKEDDDDEEEEEEEEEVEEEEAEEEEEEEFETTGDEMQIVEGKLKCQVLEDRVKCLQSFLRSYLKLATSSS 195          
BLAST of HO067920 vs. TrEMBL
Match: A2Q251_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC149207g39v2 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.026e-16
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1
Query:  133 AESPSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAM 324
            +E   T+LPEELMIEILSRVESS  LQLRCV K WKSLI++PQF+KKH+ KSFTDI  L  KA+
Sbjct:   37 SEVTGTILPEELMIEILSRVESSVTLQLRCVSKLWKSLILNPQFLKKHILKSFTDIILLFVKAL 100          
BLAST of HO067920 vs. TrEMBL
Match: C6T6D4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.054e-12
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = -2
Query:  153 M*SMALEARSVMSVNDLLRCFFTN*GSTINDFHHLQTHRNCKGLLDSTLERISIISSSGR 332
            M SMAL+ARSVMS +D+ +CFFTN GST  DFH L TH NC GLL     RISII  SGR
Sbjct:    1 MSSMALDARSVMSESDVCKCFFTNWGSTTRDFHRLHTHLNCSGLLTLIQTRISIIRPSGR 60          
BLAST of HO067920 vs. TrEMBL
Match: C6TAK5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.061e-8
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1
Query:  142 PSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKS 288
            P   LP+EL++EILSR+   + LQ RCVCK W SLI DP F+KKHL+ S
Sbjct:   45 PLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLS 93          
BLAST of HO067920 vs. TAIR peptide
Match: AT3G17480.1 (| Symbols: | F-box and associated interaction domains-containing protein | chr3:5983199-5984320 FORWARD LENGTH=373)

HSP 1 Score: 52.7582 bits (125), Expect = 1.795e-7
Identity = 25/75 (33.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query:  139 SPSTVLPEELMIEILSRVESSNPLQLRCVCKWWKSLIVDPQFVKKHLNKSFTDITDLASKAMDHMN-SFEMHLIH 360
            SP +VL E+L+ +ILSRV +++ ++LR  CK W +++ D +F+KKH + +  +  D+  +++   + S  +H +H
Sbjct:    6 SPMSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSLRVSSMSVNLHGLH 80          
The following BLAST results are available for this feature:
BLAST of HO067920 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
A2Q241_MEDTR3.517e-4457.93Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA... [more]
A2Q247_MEDTR4.033e-3248.59Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA... [more]
A2Q249_MEDTR2.452e-2168.00Cyclin-like F-box; Calcium-binding EF-hand OS=Medi... [more]
A2Q238_MEDTR1.217e-2037.89Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA... [more]
A2Q240_MEDTR3.541e-2038.99Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA... [more]
A2Q251_MEDTR9.026e-1670.31Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA... [more]
C6T6D4_SOYBN2.054e-1265.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6TAK5_SOYBN4.061e-859.18Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of HO067920 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G17480.11.795e-733.33| Symbols: | F-box and associated interaction dom... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domain, cyclin-likePFAMPF00646F-boxcoord: 31..71
score: 0.
IPR001810F-box domain, cyclin-likeSMARTSM00256no descriptioncoord: 31..71
score: 2.6
IPR001810F-box domain, cyclin-likePROFILEPS50181FBOXcoord: 25..71
score: 9
IPR022364F-box domain, Skp2-likeSUPERFAMILY81383F-box domaincoord: 18..88
score: 1
NoneNo IPR availableGENE3D1.20.1280.50no descriptioncoord: 27..70
score: 5.7
NoneNo IPR availableSEGsegsegcoord: 7..19
score: NAcoord: 106..125
score
NoneNo IPR availableSEGsegsegcoord: 12..34
score
NoneNo IPR availableSEGsegsegcoord: 42..65
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067920 ID=HO067920; Name=HO067920; organism=Cicer arietinum; type=EST; length=621bp
ATTCCGACCCCAACGGAAACAAAATCTGAAATTATGAATCCATGAAACCC
TAAATTCCGATAAACAATAATCCAAGCCTTTACGATGACGATAATGACAC
GGAAGCGACGGCGAATGATGGCGGAAGCCACGGCGGAGTCACCTAGCACG
GTTCTCCCGGAGGAACTTATGATCGAAATTCTTTCTAGAGTCGAATCAAG
CAATCCTTTACAATTGCGATGCGTTTGCAAGTGGTGGAAATCGTTGATTG
TCGATCCTCAATTCGTGAAGAAACACCTTAACAAATCGTTCACTGACATC
ACCGATCTAGCTTCTAAGGCCATGGATCACATGAATTCTTTCGAAATGCA
TCTCATCCATGCACCCGCCGTGCCTCAAGACGAAGAAGAAGAAGAAGAAA
ACGACGAAGATGATGATGATGATGATGAAGAAGAAGAGAAACAATCGATG
ATGAACTTGGTGGCTCAGTTGGATAATCTATTAATAATTGTTCGTTCTCT
TAAAGGGAATTTGGAAACTATCAAGGTTGATATGCAAGCTTTGAAGGATA
GAATGAAGTGTCTTGAAAACTTTCTTCAGATTTATCTAAAAAATGCAACA
GCTTCATCTTCATAATCTCAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR022364F-box domain, Skp2-like