GR397288

EST Overview


Name	GR397288
Unique Name	GR397288
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	364

Libraries


Library Name	Type
LIBEST_024782 ICC4958 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA_ORYSJ (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.155e-29
Identity = 59/70 (84.29%), Postives = 68/70 (97.14%), Query Frame = -2

Query:  151 TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 360
            T+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+ LREAGVTVVESPAKIG+ MF+IFKQ+G+++
Sbjct:  262 TQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMLE 331

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA2_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28
Identity = 58/71 (81.69%), Postives = 70/71 (98.59%), Query Frame = -2

Query:  151 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 363
            GT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI++LR+AGV VVESPAKIGAAMF++F+++GL++
Sbjct:  271 GTDKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELFQERGLLK 341

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA1_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At5g08300 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.161e-27
Identity = 56/71 (78.87%), Postives = 69/71 (97.18%), Query Frame = -2

Query:  151 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 363
            GTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI++L +AGV VVESPAKIG+AM+++F+++GL++
Sbjct:  276 GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELFQERGLLK 346

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=C05G5.4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.344e-20
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = -2

Query:  163 KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQK 354
            KP+V+FIAG+TAPPGRRMGHAGAI+SGGKGTA DKI  LREAGV V +SPAK+G +M   F  K
Sbjct:  258 KPVVSFIAGVTAPPGRRMGHAGAIISGGKGTAADKINALREAGVVVTDSPAKLGTSMATAFLGK 321

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCD_RICFE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis GN=sucD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.520e-19
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = -2

Query:  166 EKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQ 357
            +KPIV+FIAG+TAPPG+RMGHAGAI++GGKG+A+DK+  L+ AGVT+  SPA IG  MFD+  +
Sbjct:  228 KKPIVSFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMFDLLNK 291

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCD_RICBR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=sucD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.850e-19
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = -2

Query:  175 EKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDI 357
            +KPIV+FIAG+TAPPG+RMGHAGAI++GGKG+A+DK+  L+ AGVT+  SPA IG  M D+
Sbjct:  228 KKPIVSFIAGITAPPGKRMGHAGAIIAGGKGSAEDKLEALQSAGVTITRSPADIGKTMLDL 288

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA_DICDI (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=scsA PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 3.743e-18
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = -2

Query:  163 TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQK 360
            T+KP+V+FIAGL+APPGRRMGHAGAI+SGGKG A  KI  L+ AGVTV  SPAK+G  +     +K
Sbjct:  247 TDKPVVSFIAGLSAPPGRRMGHAGAIISGGKGDANSKIEALKAAGVTVTFSPAKLGETILQKMNEK 312

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCD_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.338e-18
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = -2

Query:  151 KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 354
            KP+V FI G TAPPG+RMGHAGAI+SGGKGTA +KI+TL + GV   ++P++IG  + D  K+ G+ +
Sbjct:  228 KPVVGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDAAKKAGIYE 295

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCA_DROME (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=Scsalpha PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 8.338e-18
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = -2

Query:  154 KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 354
            KP+V+FIAG++APPGRRMGHAGAI+SGGKG A DKI  L +AGV V  SPAK+G  +F   K+  LV
Sbjct:  262 KPVVSFIAGVSAPPGRRMGHAGAIISGGKGGANDKIAALEKAGVIVTRSPAKMGHELFKEMKRLELV 328

[Close]

BLAST of GR397288 vs. SwissProt
Match: SUCD_STAES (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.089e-17
Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = -2

Query:  151 KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 354
            KP++ FI G TAPPG+RMGHAGAI+SGGKGTA +KI+TL + GV   ++P++IG  + D  K+ G+ +
Sbjct:  228 KPVIGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDAAKKAGIYE 295

[Close]

BLAST of GR397288 vs. TrEMBL
Match: C6TNV4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.045e-30
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = -2

Query:  151 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 363
            GTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TLREAGV VVESPAKIGAAM D+FKQ+GLVQ
Sbjct:  254 GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVMVVESPAKIGAAMLDVFKQRGLVQ 324

[Close]

BLAST of GR397288 vs. TrEMBL
Match: B9N355_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827745 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.919e-29
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = -2

Query:  157 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGL 363
            GTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TLREAGVTVVESPAKIG AM D+FKQ+GL
Sbjct:  260 GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFKQRGL 328

[Close]

BLAST of GR397288 vs. TrEMBL
Match: B9RL91_RICCO (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial, putative OS=Ricinus communis GN=RCOM_1669400 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.489e-28
Identity = 62/69 (89.86%), Postives = 67/69 (97.10%), Query Frame = -2

Query:  157 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGL 363
            GT+KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TL+EAGVTVVESPAKIG AM D+FKQ+GL
Sbjct:  264 GTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFKQRGL 332

[Close]

BLAST of GR397288 vs. TrEMBL
Match: B9RL90_RICCO (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial, putative OS=Ricinus communis GN=RCOM_1669290 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.489e-28
Identity = 62/69 (89.86%), Postives = 67/69 (97.10%), Query Frame = -2

Query:  157 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGL 363
            GT+KPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TL+EAGVTVVESPAKIG AM D+FKQ+GL
Sbjct:  264 GTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFKQRGL 332

[Close]

BLAST of GR397288 vs. TrEMBL
Match: B9I4Z7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_422788 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.945e-28
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = -2

Query:  157 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGL 363
            GTEKP+VAFIAG TAPPGRRMGHAGAIVSGGKGTAQDKI+TLREAGVTVVESPAKIG AM D+FKQ+GL
Sbjct:  225 GTEKPVVAFIAGQTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGVAMLDVFKQRGL 293

[Close]

BLAST of GR397288 vs. TrEMBL
Match: D7TEX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_42.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026227001 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.540e-28
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = -2

Query:  154 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 363
            GTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TLR+ G TVVESPAKIG AM D+FKQ+GLV
Sbjct:  259 GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDVGATVVESPAKIGVAMLDVFKQRGLV 328

[Close]

BLAST of GR397288 vs. TrEMBL
Match: D7TXP9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_53.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029337001 PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.658e-28
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = -2

Query:  154 TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 360
            TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI+TLREAGVTVVESPAK+G AM + FKQKGL+
Sbjct:  266 TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKMGVAMLEAFKQKGLI 334

[Close]

BLAST of GR397288 vs. TrEMBL
Match: B9H5Q8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831388 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.390e-28
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = -2

Query:  154 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 363
            GTEKP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKI+TLR+AGV VVESPAKIG AM D+FK++GLV
Sbjct:  228 GTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKERGLV 297

[Close]

BLAST of GR397288 vs. TrEMBL
Match: A9PFB5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.390e-28
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = -2

Query:  154 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 363
            GTEKP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKI+TLR+AGV VVESPAKIG AM D+FK++GLV
Sbjct:  261 GTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKERGLV 330

[Close]

BLAST of GR397288 vs. TrEMBL
Match: A9PDB9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.390e-28
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = -2

Query:  154 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLV 363
            GTEKP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKI+TLR+AGV VVESPAKIG AM D+FK++GLV
Sbjct:  261 GTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKERGLV 330

[Close]

BLAST of GR397288 vs. TAIR peptide
Match: AT5G23250.1 (| Symbols: | Succinyl-CoA ligase, alpha subunit | chr5:7830460-7832491 FORWARD LENGTH=341)

HSP 1 Score: 124.79 bits (312), Expect = 1.171e-29
Identity = 58/71 (81.69%), Postives = 70/71 (98.59%), Query Frame = -2

Query:  151 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 363
            GT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI++LR+AGV VVESPAKIGAAMF++F+++GL++
Sbjct:  271 GTDKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELFQERGLLK 341

[Close]

BLAST of GR397288 vs. TAIR peptide
Match: AT5G08300.1 (| Symbols: | Succinyl-CoA ligase, alpha subunit | chr5:2667579-2669672 FORWARD LENGTH=347)

HSP 1 Score: 121.709 bits (304), Expect = 9.915e-29
Identity = 56/71 (78.87%), Postives = 69/71 (97.18%), Query Frame = -2

Query:  151 GTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIRTLREAGVTVVESPAKIGAAMFDIFKQKGLVQ 363
            GTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKI++L +AGV VVESPAKIG+AM+++F+++GL++
Sbjct:  276 GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELFQERGLLK 346

[Close]

BLAST of GR397288 vs. TAIR peptide
Match: AT5G23250.2 (| Symbols: | Succinyl-CoA ligase, alpha subunit | chr5:7830460-7832265 FORWARD LENGTH=297)

HSP 1 Score: 53.9138 bits (128), Expect = 2.539e-8
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = -2

Query:  289 GTEKPIVAFIAGLTAPPGRRMGHAG 363
            GT+KP+VAFIAGLTAPPGRRMGHAG
Sbjct:  271 GTDKPVVAFIAGLTAPPGRRMGHAG 295

The following BLAST results are available for this feature:

BLAST of GR397288 vs. SwissProt
BLAST of GR397288 vs. TrEMBL
BLAST of GR397288 vs. TAIR peptide

BLAST of GR397288 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SUCA_ORYSJ	6.155e-29	84.29	Probable succinyl-CoA ligase [GDP-forming] subunit...	[more]
SUCA2_ARATH	1.371e-28	81.69	Succinyl-CoA ligase [GDP-forming] subunit alpha-2,...	[more]
SUCA1_ARATH	1.161e-27	78.87	Succinyl-CoA ligase [GDP-forming] subunit alpha-1,...	[more]
SUCA_CAEEL	2.344e-20	71.88	Probable succinyl-CoA ligase [GDP-forming] subunit...	[more]
SUCD_RICFE	1.520e-19	64.06	Succinyl-CoA ligase [ADP-forming] subunit alpha OS...	[more]
SUCD_RICBR	9.850e-19	65.57	Succinyl-CoA ligase [ADP-forming] subunit alpha OS...	[more]
SUCA_DICDI	3.743e-18	63.64	Succinyl-CoA ligase [GDP-forming] subunit alpha, m...	[more]
SUCD_STAEQ	8.338e-18	55.88	Succinyl-CoA ligase [ADP-forming] subunit alpha OS...	[more]
SUCA_DROME	8.338e-18	64.18	Succinyl-CoA ligase [GDP-forming] subunit alpha, m...	[more]
SUCD_STAES	1.089e-17	54.41	Succinyl-CoA ligase [ADP-forming] subunit alpha OS...	[more]

BLAST of GR397288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TNV4_SOYBN	6.045e-30	91.55	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9N355_POPTR	3.919e-29	91.30	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RL91_RICCO	1.489e-28	89.86	Succinyl-CoA ligase [GDP-forming] subunit alpha-2,...	[more]
B9RL90_RICCO	1.489e-28	89.86	Succinyl-CoA ligase [GDP-forming] subunit alpha-2,...	[more]
B9I4Z7_POPTR	1.945e-28	89.86	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7TEX3_VITVI	2.540e-28	87.14	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7TXP9_VITVI	5.658e-28	89.86	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9H5Q8_POPTR	7.390e-28	85.71	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PFB5_POPTR	7.390e-28	85.71	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PDB9_POPTR	7.390e-28	85.71	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of GR397288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G23250.1	1.171e-29	81.69	\| Symbols: \| Succinyl-CoA ligase, alpha subunit \|...	[more]
AT5G08300.1	9.915e-29	78.87	\| Symbols: \| Succinyl-CoA ligase, alpha subunit \|...	[more]
AT5G23250.2	2.539e-8	92.00	\| Symbols: \| Succinyl-CoA ligase, alpha subunit \|...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005811	ATP-citrate lyase/succinyl-CoA ligase	PFAM	PF00549	Ligase_CoA	coord: 2..47 score: 7.9
IPR016102	Succinyl-CoA synthetase-like	GENE3D	3.40.50.261	no description	coord: 2..61 score: 7.6
IPR016102	Succinyl-CoA synthetase-like	SUPERFAMILY	52210	Succinyl-CoA synthetase domains	coord: 1..65 score: 5.3
IPR017440	ATP-citrate lyase/succinyl-CoA ligase, active site	PROSITE	PS00399	SUCCINYL_COA_LIG_2	coord: 12..25 score
None	No IPR available	PANTHER	PTHR11117	SUCCINYL-COA SYNTHETASE-RELATED	coord: 1..70 score: 4.9
None	No IPR available	SEG	seg	seg	coord: 31..45 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR397288 ID=GR397288; Name=GR397288; organism=Cicer arietinum; type=EST; length=364bp
TTCTAAGGAGCCTCTCGTATCATAAAAAAATAAAATAGGAAAAAATATCC
CATTACTATCGATGGGAATCAAGTGTTTTCTGACCATGTTGTAGGCCAAA
TCAAAACCAAAGTGATTTGATGAAAGTAGATAAAACCCCAAACTAAACTA
TTGCACCAAACCCTTCTGCTTGAAAATATCAAACATGGCAGCTCCAATTT
TAGCAGGAGACTCCACAACTGTGACTCCAGCTTCCCTGAGGGTTCTGATT
TTGTCTTGAGCAGTACCCTTACCACCCGACACGATAGCTCCTGCATGACC
CATACGACGGCCAGGGGGAGCAGTTAATCCAGCAATAAATGCAACAATGG
GCTTCTCAGTCCCG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0003878	ATP citrate synthase activity
GO:0004775	succinate-CoA ligase (ADP-forming) activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR005811	SUCC_ACL_C
IPR016102	Succinyl-CoA_synth-like
IPR017440	Cit_synth/succinyl-CoA_lig_AS

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