HO064259
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO064259 vs. SwissProt
Match: DNLI4_ARATH (DNA ligase 4 OS=Arabidopsis thaliana GN=LIG4 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.621e-22 Identity = 69/208 (33.17%), Postives = 116/208 (55.77%), Query Frame = -2 Query: 43 KRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYEQEADIAEGSLDF 663 KR LEVLM GGKV++NL A+H+V L + + + SF+ +E++LL KRLHVV+S WLE+ L+ ++L ED Y+L+P +EES E+ D E +++ S Q++ A+S +A+ S RGR R +K+ ++ N ++ + + K+ +K+ E++ESD+ ++K + +DIAE + F Sbjct: 829 KRLMLEVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLEESLQREEKLCEDVYTLRPKYMEESDTEE------------SDKSEHDTTEVASQGSAQTKEPASS--KIAITS-------SRGRSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSF 1015
BLAST of HO064259 vs. SwissProt
Match: DNLI4_ORYSJ (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica GN=LIG4 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.190e-19 Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = -2 Query: 103 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESD 672 L+LKR K ++ M GG+V S L ATH++ + + +N + + S ER+ L KRL VV++KWLED ++ RL E TYSLKP +EE E E + D +++N + A S K RKRGRP+ + K R+ R++ + AK+ + E +ESD Sbjct: 853 LALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETVQPCNDKLEENEK------------------------ADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESD 1018
BLAST of HO064259 vs. TrEMBL
Match: D7SQI2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029314001 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.961e-39 Identity = 95/200 (47.50%), Postives = 129/200 (64.50%), Query Frame = -2 Query: 79 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQN-ISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYE 672 L+L+R KLEV MGGGKV +NL+ ATH+V +P + +I SF+ E+ LL +K+LHVV +WLE CL+ +RL E YSLKP G+EES +C+H++ V+A + D+VE+QN +SF +KE KQ R KA LAS ++ RKRGRPAG KK K +QAR+ R ++ K K+ E ESD SDS +K E Sbjct: 827 LALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCNKKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIGKP-PKIYENESDASDSGEKMEEE 1025
BLAST of HO064259 vs. TrEMBL
Match: Q0PCF8_POPNI (DNA ligase OS=Populus nigra GN=PnLig4 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.030e-36 Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = -2 Query: 40 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVD-ADLIKDNVEDQNI-SFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYEQEADIAEGSLDFY 672 L+ +R KLE+ MGGGKV++N+ ATH+V L +P+ + + SFT E+ L +KRL+V+ S+WLED L+ Q+L EDTY+LKP G+EES ++ +L ++ A I D +++ + S ++ E+K+ +KAA DS L S EK RKRGRPAG KK K QA++ R+++ K AK+ +SDES S D K +E D+++G+ + + Sbjct: 835 LAFRRLKLEIFMGGGKVSNNIAHATHLVVLNVPASDVDFGSLVKSFTTAEKHFLLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESNCKEIVCDLDMEEATPISDGAKNERLPSVTDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQAQRTRARIVNKPAKISVEKSDESCSQDDK--NEENDMSDGNEEIH 1046
BLAST of HO064259 vs. TrEMBL
Match: B9IN68_POPTR (DNA ligase OS=Populus trichocarpa GN=POPTRDRAFT_911613 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.481e-34 Identity = 88/212 (41.51%), Postives = 128/212 (60.38%), Query Frame = -2 Query: 40 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYEQEADIAEGSLDFY 672 L+ +R KLE+ MGGGKV++N+ ATH+V L +P+ + + SFT E+ L +KRL+V+ S+WLED L+ Q+L EDTY+LKP G+EES +C+ L S ++ E+K+ +KAA DS L S EK RKRGRPAG KK K QAR+ R+++ K AK+ +SDES S D K +E D+++G+ + + Sbjct: 835 LAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSLVKSFTTAEKHFLLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEES---NCKEVLP---------------SVTDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRARIVNKPAKISVEKSDESCSHDDK--NEENDMSDGNEEIH 1026
BLAST of HO064259 vs. TrEMBL
Match: D7MMS2_ARALY (ATLIG4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495812 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.779e-23 Identity = 68/208 (32.69%), Postives = 115/208 (55.29%), Query Frame = -2 Query: 43 KRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYEQEADIAEGSLDF 663 KR LEVLMGGGKV++NL A+H+V L + + + SF+ +E++LL KRLHVV+S+WLED L+ ++L ED Y+L+P +EES E+ D E +++ S Q+ ++S ++ RGR R +K+ ++ N ++ + + K+ +K+ E++ESD+ ++K + +DIAE + F Sbjct: 831 KRLALEVLMGGGKVSNNLAHASHLVVLTMAEKSLDFASVSKSFSEMEKRLLLKKRLHVVSSRWLEDSLQREEKLCEDVYNLRPKYMEESDTEE------------SDKSEHDTTEVASEGSAQTEEPSSSKMTIT---------SSRGRSTTRAVKRGRSSTNSLQRVQRRRGKQPSKITGDETEESDAAEEKVSTRLSDIAEETDSF 1017
BLAST of HO064259 vs. TrEMBL
Match: Q01KE4_ORYSA (DNA ligase OS=Oryza sativa GN=OSIGBa0113I13.3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.255e-18 Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = -2 Query: 103 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESD 672 L+LKR K ++ M GG+V S L ATH++ + + +N + + S ER+ L KRL VV++KWLED ++ RL E TYSLKP +EE E E + D +++N + A S K RKRGRP+ + K R+ R++ + AK+ + E +ESD Sbjct: 812 LALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETVQPCNDKLEENEK------------------------ADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESD 977
BLAST of HO064259 vs. TrEMBL
Match: B9FCD0_ORYSJ (DNA ligase OS=Oryza sativa subsp. japonica GN=OsJ_16077 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.255e-18 Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = -2 Query: 103 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESD 672 L+LKR K ++ M GG+V S L ATH++ + + +N + + S ER+ L KRL VV++KWLED ++ RL E TYSLKP +EE E E + D +++N + A S K RKRGRP+ + K R+ R++ + AK+ + E +ESD Sbjct: 853 LALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETVQPCNDKLEENEK------------------------ADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESD 1018
BLAST of HO064259 vs. TrEMBL
Match: B8ATU5_ORYSI (DNA ligase OS=Oryza sativa subsp. indica GN=OsI_17298 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.255e-18 Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = -2 Query: 103 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESD 672 L+LKR K ++ M GG+V S L ATH++ + + +N + + S ER+ L KRL VV++KWLED ++ RL E TYSLKP +EE E E + D +++N + A S K RKRGRP+ + K R+ R++ + AK+ + E +ESD Sbjct: 853 LALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETVQPCNDKLEENEK------------------------ADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESD 1018
BLAST of HO064259 vs. TrEMBL
Match: C5YFJ3_SORBI (DNA ligase OS=Sorghum bicolor GN=Sb06g027820 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.047e-16 Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = -2 Query: 94 LSLKRFKLEVLMGGGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVK-TDGNQARKARSQVAKKRAKLCEYESDESDSLD 672 L+LKR K ++ M GG+V S++ ATH+V + + +N + + SF ER+ L KRLHVV++KWLED ++ +LSE YSLKP +EE E E + ++++ E + N K++R ++ + R A R +++++ GNQ K V + + E + D++ D Sbjct: 774 LALKRVKQDLTMHGGQVCSSIAPATHLVVVSVLQAYNFDNLYKSFPPAERRYLHDKRLHVVSNKWLEDSVEKQMKLSETAYSLKPDTLEELEIERSEENVQPPDHKLEEHREVERSHAKNVPRKRTRPTSS----------------RTARAAPRPVRRMRPRRGNQKAKIGDDVESEESGPSECQDDQNLDTD 951
BLAST of HO064259 vs. TAIR peptide
Match: AT5G57160.1 (| Symbols: ATLIG4, LIG4 | DNA ligase IV | chr5:23155150-23161688 REVERSE LENGTH=1219) HSP 1 Score: 106.301 bits (264), Expect = 1.634e-23 Identity = 69/208 (33.17%), Postives = 116/208 (55.77%), Query Frame = -2 Query: 43 KRFKLEVLMGGGKVTSNLNFATHVVALFLPSCH-NHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSSQRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASGDSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQVAKKRAKLCEYESDESDSLDKKPYEQEADIAEGSLDF 663 KR LEVLM GGKV++NL A+H+V L + + + SF+ +E++LL KRLHVV+S WLE+ L+ ++L ED Y+L+P +EES E+ D E +++ S Q++ A+S +A+ S RGR R +K+ ++ N ++ + + K+ +K+ E++ESD+ ++K + +DIAE + F Sbjct: 829 KRLMLEVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLEESLQREEKLCEDVYTLRPKYMEESDTEE------------SDKSEHDTTEVASQGSAQTKEPASS--KIAITS-------SRGRSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSF 1015 The following BLAST results are available for this feature:
BLAST of HO064259 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of HO064259 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 8
BLAST of HO064259 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO064259 ID=HO064259; Name=HO064259; organism=Cicer arietinum; type=EST; length=691bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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