HO067672

EST Overview


Name	HO067672
Unique Name	HO067672
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	341

Libraries


Library Name	Type
LIBEST_026415 Chickpea drought stressed cDNA SSH library BULK2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067672 vs. SwissProt
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.254e-22
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            D++L++TGG+GIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL+G PV PS  VE +P AKAL+P  V+  F N
Sbjct:  176 DSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254

[Close]

BLAST of HO067672 vs. SwissProt
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.237e-21
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            D++L++TGG+GIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL G PV PS  +E +P AKALEP  VI  + N
Sbjct:  175 DSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253

[Close]

BLAST of HO067672 vs. SwissProt
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.111e-21
Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DT+L+VTGGSGIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL G  V PS  V+ +P AKA+EP  VI  F N
Sbjct:  180 DTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258

[Close]

BLAST of HO067672 vs. SwissProt
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.198e-20
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DT+L++TGGSG+FEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL GK V+PS  V+ +  A+A +P A I  F N
Sbjct:  176 DTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254

[Close]

BLAST of HO067672 vs. TrEMBL
Match: Q599T8_MEDTR (Allene-oxide cyclase OS=Medicago truncatula GN=aoc2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.456e-32
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGF 228
            DTYL+VTGGSGIFEGV GQVKL+Q+VFPFKIFYTFYL+GIKDLP+ELLGK V+PSPAVEASPAAKALEPHAVI GF
Sbjct:  173 DTYLAVTGGSGIFEGVKGQVKLHQIVFPFKIFYTFYLRGIKDLPQELLGKHVEPSPAVEASPAAKALEPHAVIAGF 248

[Close]

BLAST of HO067672 vs. TrEMBL
Match: Q68IP6_HUMLU (Allene oxide cyclase C4 OS=Humulus lupulus PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.917e-29
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGF 228
            DTYL+VTGGSGIFEGVSGQVKL+QL+FPFK+FYTFYLKGIKDLPEELLG  V+PSPAVE SPAAKA E HA I+ F
Sbjct:  177 DTYLAVTGGSGIFEGVSGQVKLHQLIFPFKLFYTFYLKGIKDLPEELLGVHVEPSPAVEPSPAAKACEDHAAIKSF 252

[Close]

BLAST of HO067672 vs. TrEMBL
Match: A9PK60_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.917e-29
Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIK-DLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL+VTGGSGIFEGV GQVKL QLVFPFK+FYTFYLKG+K DLPEELLGK V+PSPAVE SPAAKA EPHAVI  + N
Sbjct:  173 DTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGLKADLPEELLGKAVEPSPAVEPSPAAKACEPHAVIANYTN 251

[Close]

BLAST of HO067672 vs. TrEMBL
Match: A9PEG0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.917e-29
Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIK-DLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL+VTGGSGIFEGV GQVKL QLVFPFK+FYTFYLKG+K DLPEELLGK V+PSPAVE SPAAKA EPHAVI  + N
Sbjct:  173 DTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGLKADLPEELLGKAVEPSPAVEPSPAAKACEPHAVIANYTN 251

[Close]

BLAST of HO067672 vs. TrEMBL
Match: A9PCM3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.917e-29
Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIK-DLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL+VTGGSGIFEGV GQVKL QLVFPFK+FYTFYLKG+K DLPEELLGK V+PSPAVE SPAAKA EPHAVI  + N
Sbjct:  173 DTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGLKADLPEELLGKAVEPSPAVEPSPAAKACEPHAVIANYTN 251

[Close]

BLAST of HO067672 vs. TrEMBL
Match: B9H3Q1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_198984 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.488e-28
Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIK-DLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGF 228
            DTYL+VTGGSGIFEGV GQVKL QLVFPFK+FYTFYLKG+K DLPEELLGK V+PSPAVE SPAAKA EPHAVI  +
Sbjct:  169 DTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGLKADLPEELLGKAVEPSPAVEPSPAAKACEPHAVIANY 245

[Close]

BLAST of HO067672 vs. TrEMBL
Match: C6TCY8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.539e-28
Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL+V+GGSGIFEGV GQVKL+QLVFPFK+FYTFYLKG+ DLP ELLGKPV+PSP+VE SPAA A EPHA +  F N
Sbjct:  178 DTYLAVSGGSGIFEGVYGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPSVEPSPAAMATEPHACLPNFTN 255

[Close]

BLAST of HO067672 vs. TrEMBL
Match: Q711Q9_MEDTR (Allene oxide cyclase OS=Medicago truncatula GN=aoc PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.655e-28
Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL++TGGSGIFEGV GQVKL QLVFPFK+FYTFYLKG+ DLP +LLGKPVDPSP VE S AAKA EPHA +  F N
Sbjct:  175 DTYLAITGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGVADLPADLLGKPVDPSPHVEPSTAAKATEPHASLPNFTN 252

[Close]

BLAST of HO067672 vs. TrEMBL
Match: Q3LI84_PEA (Allene oxide cyclase OS=Pisum sativum GN=aoc PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.655e-28
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DTYL+VTGGSGIFEGV G+VKL Q+VFPFK+FYTFYLKGI DLP+ELLG PV+PSP VE SPAAKA +PHA +  F N
Sbjct:  175 DTYLAVTGGSGIFEGVHGKVKLQQIVFPFKLFYTFYLKGIPDLPDELLGNPVEPSPNVEPSPAAKATQPHASLSNFTN 252

[Close]

BLAST of HO067672 vs. TrEMBL
Match: Q9AYT8_9ROSI (Mangrin OS=Bruguiera sexangula GN=mang-1 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 9.647e-28
Identity = 59/76 (77.63%), Postives = 67/76 (88.16%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGIKDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGF 228
            DT+L+VTGGSGIFEGVSGQVKL QLV+PFK+FYTFYL+GIKDLPEEL  KPV+P P+VE  PAAKA EPHAV+  F
Sbjct:  179 DTHLAVTGGSGIFEGVSGQVKLQQLVYPFKLFYTFYLRGIKDLPEELTKKPVEPHPSVEPMPAAKACEPHAVVANF 254

[Close]

BLAST of HO067672 vs. TAIR peptide
Match: AT3G25760.1 (| Symbols: AOC1, ERD12 | allene oxide cyclase 1 | chr3:9403972-9405105 FORWARD LENGTH=254)

HSP 1 Score: 102.449 bits (254), Expect = 5.763e-23
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            D++L++TGG+GIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL+G PV PS  VE +P AKAL+P  V+  F N
Sbjct:  176 DSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254

[Close]

BLAST of HO067672 vs. TAIR peptide
Match: AT3G25770.1 (| Symbols: AOC2 | allene oxide cyclase 2 | chr3:9406975-9407839 FORWARD LENGTH=253)

HSP 1 Score: 101.679 bits (252), Expect = 9.831e-23
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            D++L++TGG+GIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL G PV PS  +E +P AKALEP  VI  + N
Sbjct:  175 DSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253

[Close]

BLAST of HO067672 vs. TAIR peptide
Match: AT3G25780.1 (| Symbols: AOC3 | allene oxide cyclase 3 | chr3:9409362-9410409 FORWARD LENGTH=258)

HSP 1 Score: 100.908 bits (250), Expect = 1.677e-22
Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DT+L+VTGGSGIFEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL G  V PS  V+ +P AKA+EP  VI  F N
Sbjct:  180 DTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258

[Close]

BLAST of HO067672 vs. TAIR peptide
Match: AT1G13280.1 (| Symbols: AOC4 | allene oxide cyclase 4 | chr1:4547624-4548552 FORWARD LENGTH=254)

HSP 1 Score: 96.2857 bits (238), Expect = 4.130e-21
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 1

Query:    1 DTYLSVTGGSGIFEGVSGQVKLNQLVFPFKIFYTFYLKGI-KDLPEELLGKPVDPSPAVEASPAAKALEPHAVIEGFIN 234
            DT+L++TGGSG+FEG  GQVKL QLV+P K+FYTFYLKG+  DLP EL GK V+PS  V+ +  A+A +P A I  F N
Sbjct:  176 DTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254

The following BLAST results are available for this feature:

BLAST of HO067672 vs. SwissProt
BLAST of HO067672 vs. TrEMBL
BLAST of HO067672 vs. TAIR peptide

BLAST of HO067672 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
AOC1_ARATH	7.254e-22	62.03	Allene oxide cyclase 1, chloroplastic OS=Arabidops...	[more]
AOC2_ARATH	1.237e-21	62.03	Allene oxide cyclase 2, chloroplastic OS=Arabidops...	[more]
AOC3_ARATH	2.111e-21	64.56	Allene oxide cyclase 3, chloroplastic OS=Arabidops...	[more]
AOC4_ARATH	5.198e-20	59.49	Allene oxide cyclase 4, chloroplastic OS=Arabidops...	[more]

BLAST of HO067672 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q599T8_MEDTR	6.456e-32	88.16	Allene-oxide cyclase OS=Medicago truncatula GN=aoc...	[more]
Q68IP6_HUMLU	3.917e-29	82.89	Allene oxide cyclase C4 OS=Humulus lupulus PE=2 SV...	[more]
A9PK60_9ROSI	3.917e-29	82.28	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PEG0_POPTR	3.917e-29	82.28	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PCM3_POPTR	3.917e-29	82.28	Putative uncharacterized protein OS=Populus tricho...	[more]
B9H3Q1_POPTR	1.488e-28	83.12	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
C6TCY8_SOYBN	2.539e-28	76.92	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q711Q9_MEDTR	5.655e-28	76.92	Allene oxide cyclase OS=Medicago truncatula GN=aoc...	[more]
Q3LI84_PEA	5.655e-28	75.64	Allene oxide cyclase OS=Pisum sativum GN=aoc PE=2 ...	[more]
Q9AYT8_9ROSI	9.647e-28	77.63	Mangrin OS=Bruguiera sexangula GN=mang-1 PE=2 SV=2	[more]

BLAST of HO067672 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G25760.1	5.763e-23	62.03	\| Symbols: AOC1, ERD12 \| allene oxide cyclase 1 \| ...	[more]
AT3G25770.1	9.831e-23	62.03	\| Symbols: AOC2 \| allene oxide cyclase 2 \| chr3:94...	[more]
AT3G25780.1	1.677e-22	64.56	\| Symbols: AOC3 \| allene oxide cyclase 3 \| chr3:94...	[more]
AT1G13280.1	4.130e-21	59.49	\| Symbols: AOC4 \| allene oxide cyclase 4 \| chr1:45...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009410	Allene oxide cyclase	PFAM	PF06351	Allene_ox_cyc	coord: 1..76 score: 2
None	No IPR available	SUPERFAMILY	141493	Allene oxide cyclase-like	coord: 1..78 score: 7
None	No IPR available	SEG	seg	seg	coord: 7..40 score
None	No IPR available	SEG	seg	seg	coord: 16..36 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067672 ID=HO067672; Name=HO067672; organism=Cicer arietinum; type=EST; length=341bp
GACACTTATCTATCTGTGACTGGTGGTTCTGGAATATTTGAAGGTGTTAG
TGGCCAAGTGAAGCTGAATCAGCTTGTGTTTCCTTTTAAGATTTTCTACA
CATTTTATTTGAAGGGTATTAAGGATTTGCCTGAAGAGCTTCTTGGTAAG
CCTGTTGATCCTAGCCCTGCTGTTGAAGCTTCTCCTGCTGCTAAGGCTCT
TGAGCCTCATGCTGTCATTGAAGGTTTTATTAACTACTAAATTTGATGCT
TCTTTGTCTTATTATAATGGTCAAATAATAATTGGATTTTGTAATGGATA
TATTTCTATAAGTGTTCAAAGAGTACCTCGGCCGCGACCAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast

Vocabulary: **Molecular Function**
Term	Definition
GO:0016853	isomerase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009410	Allene_ox_cyc

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