GR404898

EST Overview
NameGR404898
Unique NameGR404898
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length498
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR404898 vs. TrEMBL
Match: Q2YE87_SOYBN (NB-LRR type disease resistance protein Rps1-k-2 OS=Glycine max GN=Rps1-k-2 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.850e-25
Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = -2
Query:  162 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDEWI 497
            L +   CDG++SFP +  G                   LDCT L HLTSLQ+L IF C KLENMAGE LP +L  L + +CPLLE+RCRMKHPQIWPK+SHI  I V + WI
Sbjct: 1140 LNVGGPCDGIKSFPKE--GLLPPSLTSLSLYDLSNLEMLDCTGLLHLTSLQQLQIFGCPKLENMAGESLPFSLIKLTMVECPLLEKRCRMKHPQIWPKVSHIPGIKVGNRWI 1249          
BLAST of GR404898 vs. TrEMBL
Match: Q2YE88_SOYBN (NB-LRR type disease resistance protein Rps1-k-1 OS=Glycine max GN=Rps1-k-1 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.573e-22
Identity = 58/112 (51.79%), Postives = 67/112 (59.82%), Query Frame = -2
Query:  162 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDEWI 497
            L +   CDG++SFP +  G                   LDCT L HLTSLQ+L I  C  LENM GERLP +L  L I  CPLL++RCR KHPQIWPKISHI  I VD+ WI
Sbjct: 1120 LYVGGRCDGIKSFPKE--GLLPPSLTYLYLSGFSNLEMLDCTGLLHLTSLQQLTIDGCPLLENMVGERLPDSLIKLTIKSCPLLKKRCRKKHPQIWPKISHIPGIKVDNRWI 1229          
BLAST of GR404898 vs. TrEMBL
Match: C6ZS24_SOYBN (NB-LRR type disease resistance protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.511e-20
Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = -2
Query:  177 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILV 497
            L +   C G++SFP +  G                   LDC  L HLTSLQ+L I +C KLENMAGERLPA+L  L I +CP+L+ERC  KH +IWPKISHI  I+V
Sbjct: 1133 LYVQGPCYGIKSFPKE--GLLPPSLTSLHLFDFSSLETLDCEGLIHLTSLQELEINSCQKLENMAGERLPASLIKLSIHECPMLQERCHKKHKEIWPKISHIHGIVV 1237          
BLAST of GR404898 vs. TrEMBL
Match: A5AGF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024559 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.563e-12
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = -2
Query:  171 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDD 368
            L HLTSL+KL IF CSKL+ +  ERLP +L+ L I+DCPLLE+RC+ +  + W  I+HI +I ++D
Sbjct: 1173 LQHLTSLKKLWIFDCSKLKYLTKERLPDSLSYLCIYDCPLLEKRCQFEKGEEWRYIAHIPNIEIND 1238          
BLAST of GR404898 vs. TrEMBL
Match: B9GX04_POPTR (Cc-nbs-lrr resistance protein OS=Populus trichocarpa GN=POPTRDRAFT_799642 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.634e-11
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = -2
Query:  183 CDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSI 479
            CD VESFP++                      L+   L HLTSL +L I  C  L +M  E+LP++LT LDI  CP+LE+RC  +  + WPKISHI +I
Sbjct: 1038 CDDVESFPEETL--LPSTLTSLEIWSLEKLNSLNYKGLQHLTSLARLKIRFCRNLHSMPEEKLPSSLTYLDICGCPVLEKRCEKEKGEDWPKISHIPNI 1134          
BLAST of GR404898 vs. TrEMBL
Match: A5C756_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022669 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.634e-11
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = -2
Query:  168 LTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 359
            LTSL+KL IF C KL+++  ERLP +L+ LDI  CPLLE+RC+ +  Q W  I+HI  I +  E
Sbjct: 1334 LTSLEKLFIFNCPKLQSLTRERLPDSLSXLDILSCPLLEQRCQFEEGQEWDYIAHIPKIFIGFE 1397          
BLAST of GR404898 vs. TrEMBL
Match: A5CB47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003723 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.057e-10
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = -2
Query:  168 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 497
            L I+ + + +ESFP++ F                    LD   L HLTSL+ L+I+ C KLE++  + LP++L+ L I  CPLLE+RC+    + WP ISHI  I++ +E
Sbjct: 1227 LEIEGLEERMESFPEERF--LPSTLTSLIIDNFANLKSLDNKGLEHLTSLETLSIYDCEKLESLPKQGLPSSLSRLSIRKCPLLEKRCQRDKGKKWPNISHIPCIVIFNE 1334          

HSP 2 Score: 57.3806 bits (137), Expect = 5.430e-7
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = -2
Query:  183 HLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSI 362
            HLTSL+ L I  C KL+++  + LP++L+ L I DCPL  +RC+    + WP ISH  ++
Sbjct: 1719 HLTSLETLMIVXCXKLKSLPKQGLPSSLSCLYIXDCPLPRKRCQRYKXKEWPSISHXPAL 1778          
BLAST of GR404898 vs. TrEMBL
Match: B9HGQ9_POPTR (Cc-nbs-lrr resistance protein OS=Populus trichocarpa GN=POPTRDRAFT_562169 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.381e-10
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = -2
Query:  177 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILV 368
            L  L+SL KL I++C KLE+M  + LP++L  L+I DCPLLE+RCR +  + WPKISHI  I +
Sbjct: 1233 LQQLSSLHKLNIWSCPKLESMPEQGLPSSLEYLEIGDCPLLEKRCRKEIGEDWPKISHIPFIKI 1296          
BLAST of GR404898 vs. TrEMBL
Match: D7T008_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_34.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022963001 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.804e-10
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = -2
Query:  165 DCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDD--EW 380
            D  EL  LTSLQKL I  C KL+++  E+LP  L +L I +CPLL++RC+    + W  I+HI  I++DD  EW
Sbjct:  954 DSLELQLLTSLQKLQICNCPKLQSLTEEQLPTNLYVLTIQNCPLLKDRCKFWTGEDWHHIAHIPHIVIDDQVEW 1027          

HSP 2 Score: 57.3806 bits (137), Expect = 5.430e-7
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = -2
Query:  168 LTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 359
            LTS QKL I  C KL+++  E LP +L++L I +CPLL+ +C+    + W  I+HI  ++ +D+
Sbjct: 1057 LTSFQKLEIHDCPKLQSLKEELLPTSLSVLTIQNCPLLKGQCKFWTGEDWHHIAHIPYVVTNDQ 1120          
BLAST of GR404898 vs. TrEMBL
Match: D7TDN0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_158.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001448001 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.076e-10
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = -2
Query:  168 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 368
            L HLTSL+ L+I+ C KLE++  + LP++L+ L I  CPLLE+RC+    + WP ISHI  I++ +E
Sbjct:  567 LEHLTSLETLSIYRCEKLESLPKQGLPSSLSHLYILKCPLLEKRCQRDKGKKWPNISHIPCIVIFNE 633          
The following BLAST results are available for this feature:
BLAST of GR404898 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2YE87_SOYBN9.850e-2552.68NB-LRR type disease resistance protein Rps1-k-2 OS... [more]
Q2YE88_SOYBN1.573e-2251.79NB-LRR type disease resistance protein Rps1-k-1 OS... [more]
C6ZS24_SOYBN2.511e-2049.53NB-LRR type disease resistance protein OS=Glycine ... [more]
A5AGF6_VITVI9.563e-1253.03Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GX04_POPTR3.634e-1141.41Cc-nbs-lrr resistance protein OS=Populus trichocar... [more]
A5C756_VITVI3.634e-1151.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5CB47_VITVI1.057e-1037.27Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HGQ9_POPTR1.381e-1053.13Cc-nbs-lrr resistance protein OS=Populus trichocar... [more]
D7T008_VITVI1.804e-1047.30Whole genome shotgun sequence of line PN40024, sca... [more]
D7TDN0_VITVI3.076e-1047.76Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..37
score
NoneNo IPR availableSEGsegsegcoord: 20..39
score
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 11..101
score: 4.5

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404898 ID=GR404898; Name=GR404898; organism=Cicer arietinum; type=EST; length=498bp
AGCTCATCAATTTCACTTAAATAATCTTTACTTGAAAATATGAAATAAAA
TATTTGTTATGACTCTAGGCCTATACGACCTCTTATAACAAAATCCAAGT
TGCATTTACAAGAGGCAGGGCAAAACAATTACCAGTTGAAAATCCAAGTT
GAAGCTTTCTAAATCCATTCATCGTCAACCAAAATGCTCTGGATGTGGGA
AATTTTGGGCCAAATTTGCGGGTGTTTCATGCGGCACCGTTCTTCCAGCA
GTGGACAATCAAAGATGTCAAGTATTGTTAGAGTAGCAGGCAGCCTTTCT
CCCGCCATATTCTCCAGCTTTGAACAAGTAAAAATTGCTAATTTTTGGAG
GGACGTGAGGTGGAAAAGCTCTGTGCAGTCCAACGTGTGCAAACTTGACA
TACTGGTTAGCGTTAGAGAGGTAAGGGAGGGAGGCAGCAACCCAAAATCC
TTATCGGGGAATGACTCCACACCATCACATACATTATCAATTGTAAGA
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