GR404898
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404898 vs. TrEMBL
Match: Q2YE87_SOYBN (NB-LRR type disease resistance protein Rps1-k-2 OS=Glycine max GN=Rps1-k-2 PE=4 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.850e-25 Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 162 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDEWI 497 L + CDG++SFP + G LDCT L HLTSLQ+L IF C KLENMAGE LP +L L + +CPLLE+RCRMKHPQIWPK+SHI I V + WI Sbjct: 1140 LNVGGPCDGIKSFPKE--GLLPPSLTSLSLYDLSNLEMLDCTGLLHLTSLQQLQIFGCPKLENMAGESLPFSLIKLTMVECPLLEKRCRMKHPQIWPKVSHIPGIKVGNRWI 1249
BLAST of GR404898 vs. TrEMBL
Match: Q2YE88_SOYBN (NB-LRR type disease resistance protein Rps1-k-1 OS=Glycine max GN=Rps1-k-1 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.573e-22 Identity = 58/112 (51.79%), Postives = 67/112 (59.82%), Query Frame = -2 Query: 162 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDEWI 497 L + CDG++SFP + G LDCT L HLTSLQ+L I C LENM GERLP +L L I CPLL++RCR KHPQIWPKISHI I VD+ WI Sbjct: 1120 LYVGGRCDGIKSFPKE--GLLPPSLTYLYLSGFSNLEMLDCTGLLHLTSLQQLTIDGCPLLENMVGERLPDSLIKLTIKSCPLLKKRCRKKHPQIWPKISHIPGIKVDNRWI 1229
BLAST of GR404898 vs. TrEMBL
Match: C6ZS24_SOYBN (NB-LRR type disease resistance protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.511e-20 Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = -2 Query: 177 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILV 497 L + C G++SFP + G LDC L HLTSLQ+L I +C KLENMAGERLPA+L L I +CP+L+ERC KH +IWPKISHI I+V Sbjct: 1133 LYVQGPCYGIKSFPKE--GLLPPSLTSLHLFDFSSLETLDCEGLIHLTSLQELEINSCQKLENMAGERLPASLIKLSIHECPMLQERCHKKHKEIWPKISHIHGIVV 1237
BLAST of GR404898 vs. TrEMBL
Match: A5AGF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024559 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.563e-12 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = -2 Query: 171 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDD 368 L HLTSL+KL IF CSKL+ + ERLP +L+ L I+DCPLLE+RC+ + + W I+HI +I ++D Sbjct: 1173 LQHLTSLKKLWIFDCSKLKYLTKERLPDSLSYLCIYDCPLLEKRCQFEKGEEWRYIAHIPNIEIND 1238
BLAST of GR404898 vs. TrEMBL
Match: B9GX04_POPTR (Cc-nbs-lrr resistance protein OS=Populus trichocarpa GN=POPTRDRAFT_799642 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.634e-11 Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = -2 Query: 183 CDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSI 479 CD VESFP++ L+ L HLTSL +L I C L +M E+LP++LT LDI CP+LE+RC + + WPKISHI +I Sbjct: 1038 CDDVESFPEETL--LPSTLTSLEIWSLEKLNSLNYKGLQHLTSLARLKIRFCRNLHSMPEEKLPSSLTYLDICGCPVLEKRCEKEKGEDWPKISHIPNI 1134
BLAST of GR404898 vs. TrEMBL
Match: A5C756_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022669 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.634e-11 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 168 LTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 359 LTSL+KL IF C KL+++ ERLP +L+ LDI CPLLE+RC+ + Q W I+HI I + E Sbjct: 1334 LTSLEKLFIFNCPKLQSLTRERLPDSLSXLDILSCPLLEQRCQFEEGQEWDYIAHIPKIFIGFE 1397
BLAST of GR404898 vs. TrEMBL
Match: A5CB47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003723 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.057e-10 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = -2 Query: 168 LTIDNVCDGVESFPDKDFGXXXXXXXXXXXXXXXXXXXLDCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 497 L I+ + + +ESFP++ F LD L HLTSL+ L+I+ C KLE++ + LP++L+ L I CPLLE+RC+ + WP ISHI I++ +E Sbjct: 1227 LEIEGLEERMESFPEERF--LPSTLTSLIIDNFANLKSLDNKGLEHLTSLETLSIYDCEKLESLPKQGLPSSLSRLSIRKCPLLEKRCQRDKGKKWPNISHIPCIVIFNE 1334 HSP 2 Score: 57.3806 bits (137), Expect = 5.430e-7 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = -2 Query: 183 HLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSI 362 HLTSL+ L I C KL+++ + LP++L+ L I DCPL +RC+ + WP ISH ++ Sbjct: 1719 HLTSLETLMIVXCXKLKSLPKQGLPSSLSCLYIXDCPLPRKRCQRYKXKEWPSISHXPAL 1778
BLAST of GR404898 vs. TrEMBL
Match: B9HGQ9_POPTR (Cc-nbs-lrr resistance protein OS=Populus trichocarpa GN=POPTRDRAFT_562169 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.381e-10 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = -2 Query: 177 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILV 368 L L+SL KL I++C KLE+M + LP++L L+I DCPLLE+RCR + + WPKISHI I + Sbjct: 1233 LQQLSSLHKLNIWSCPKLESMPEQGLPSSLEYLEIGDCPLLEKRCRKEIGEDWPKISHIPFIKI 1296
BLAST of GR404898 vs. TrEMBL
Match: D7T008_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_34.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022963001 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.804e-10 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = -2 Query: 165 DCTELFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDD--EW 380 D EL LTSLQKL I C KL+++ E+LP L +L I +CPLL++RC+ + W I+HI I++DD EW Sbjct: 954 DSLELQLLTSLQKLQICNCPKLQSLTEEQLPTNLYVLTIQNCPLLKDRCKFWTGEDWHHIAHIPHIVIDDQVEW 1027 HSP 2 Score: 57.3806 bits (137), Expect = 5.430e-7 Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = -2 Query: 168 LTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 359 LTS QKL I C KL+++ E LP +L++L I +CPLL+ +C+ + W I+HI ++ +D+ Sbjct: 1057 LTSFQKLEIHDCPKLQSLKEELLPTSLSVLTIQNCPLLKGQCKFWTGEDWHHIAHIPYVVTNDQ 1120
BLAST of GR404898 vs. TrEMBL
Match: D7TDN0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_158.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001448001 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.076e-10 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = -2 Query: 168 LFHLTSLQKLAIFTCSKLENMAGERLPATLTILDIFDCPLLEERCRMKHPQIWPKISHIQSILVDDE 368 L HLTSL+ L+I+ C KLE++ + LP++L+ L I CPLLE+RC+ + WP ISHI I++ +E Sbjct: 567 LEHLTSLETLSIYRCEKLESLPKQGLPSSLSHLYILKCPLLEKRCQRDKGKKWPNISHIPCIVIFNE 633 The following BLAST results are available for this feature:
BLAST of GR404898 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404898 ID=GR404898; Name=GR404898; organism=Cicer arietinum; type=EST; length=498bpback to top |