CESSR62, CESSR62 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	CESSR62
Genbank ID	EX567512
Type	EST-SSR
Species	Cicer arietinum
Germplasm	ICCV2
Repeat Motif	(TGA)5, (TAT)3
Primer 1	CESSR62.Forward primer: ACCAGCTGCTAGACCTGATGTT
Primer 2	CESSR62.Reverse primer: GCAATAAAACAAAATCCTCACACC
Product Length	245
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	EX567512

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ca6	chromosome	Ca6:49140007..49140249 .
chr6	chromosome	chr6:49140007..49140249 .

Publications


Year	Publication
2009	Choudhary S, Sethy NK, Shokeen B, Bhatia S. Development of chickpea EST-SSR markers and analysis of allelic variation across related species. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2009 Feb; 118(3):591-608.
2015	Gupta S, Kumar T, Verma S, Bharadwaj C, Bhatia S. Development of gene-based markers for use in construction of the chickpea (Cicer arietinum L.) genetic linkage map and identification of QTLs associated with seed weight and plant height. 2015 Oct 7.

Germplasm


Stock Name	Type
ICCV2	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2012	LG2	N/A	9.5	CESSR62	View
2	chickpea-ICC4958xPI489777-RIL-2012-2	LG8	N/A	50	CESSR62	View
3	chickpea-ICC4958xPI489777-RIL-2015-2	LG6	N/A	29.67	CESSR62	View
4	Chickpea_SBD377_X_BGD112_RIL	LG5	N/A	91.7	CESSR62	View
5	Chickpea-SBD377/BGD112-RIL-High_density	LG05	N/A	44.09	CESSR62	View
6	Chickpea-ICC4958/PI489777-RIL-2020	LG06	N/A	164.85	CESSR62	View