Vfaba.Hedin2.R1.1g035840.1

Transcript Overview
NameVfaba.Hedin2.R1.1g035840.1
Unique NameVfaba.Hedin2.R1.1g035840.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length423
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr1Schromosomechr1S:230403052..230403557 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR147Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL658Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL023Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL478Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0285Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL037Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL138Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL217Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL613Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvfhL403Pisum sativum Cameor genome v1aPisum sativum
psvfhL416Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR112Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL071Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR123Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR173Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL395Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL041Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0082Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0261Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL647Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0721Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0952Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1035Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1126Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR149Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR165Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR123Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR111Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR157Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR160Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL023Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL426Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL061Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL672Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL025Cicer arietinum
carvfhL417Cicer arietinum
ccavfhL075Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL386Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR209Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR216Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR141Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR183Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL562Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL631Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR187Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR195Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL136Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL459Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR107Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR156Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0783000-T3Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.07G052600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-TanjilR_23552Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_04282Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan05g187700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_00473.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_17187Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004486970.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_01148.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr05.1001038Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-KK1_013973Cajanus cajan Asha genome v1.0Cajanus cajan
jg43478.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va05G051040.4Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g283080.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_23570.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.L003343.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.1g023800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g035840Vfaba.Hedin2.R1.1g035840_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g035840.1_vfh_v1-exonVfaba.Hedin2.R1.1g035840.1_vfh_v1-exon-chr1S_vfh_v1:230403052..230403291Vicia fabaexon
Vfaba.Hedin2.R1.1g035840.1_vfh_v1-exonVfaba.Hedin2.R1.1g035840.1_vfh_v1-exon-chr1S_vfh_v1:230403375..230403557Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g035840.1_vfh_v1-cdsVfaba.Hedin2.R1.1g035840.1_vfh_v1-cds-chr1S_vfh_v1:230403052..230403291Vicia fabaCDS
Vfaba.Hedin2.R1.1g035840.1_vfh_v1-cdsVfaba.Hedin2.R1.1g035840.1_vfh_v1-cds-chr1S_vfh_v1:230403375..230403557Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.1g035840.1_vfh_v1Vfaba.Hedin2.R1.1g035840.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.1g035840.1_vfh_v1Vfaba.Hedin2.R1.1g035840.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251U753|A0A251U753_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0227831 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.895e-80
Identity = 124/139 (89.21%), Postives = 131/139 (94.24%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GRK GGPRKK+VTRSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINP+LLPK+T  AA  PKSPSKA KSPKKA
Sbjct:   11 AAGRKAGGPRKKAVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKT--AAKEPKSPSKATKSPKKA 147
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7N2KPH4|A0A7N2KPH4_QUELO (Histone H2A OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 4.838e-80
Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            AGGRKG G RKKSVTRSVKAGLQFPVGRIGR+LKKGRYAQR G+GAPVY+AAVLEYLAAEVLELAGNAARDNKK RI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+TE     PKSPSKA KSPKKA
Sbjct:    6 AGGRKGSGSRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRCGSGAPVYMAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTEKTTKEPKSPSKAAKSPKKA 144
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371F2C4|A0A371F2C4_MUCPR (Histone H2A (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_48079 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.133e-79
Identity = 121/135 (89.63%), Postives = 129/135 (95.56%), Query Frame = 0 
Query:    6 KGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            KGGGP+KK V+RSVKAGLQFPVGRIGR+LKKGRY+QRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINPVLLPK+TE A+  PKSPSKA KSPKKA
Sbjct:    1 KGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTEKASKEPKSPSKATKSPKKA 135
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LYV8|A0A2U1LYV8_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA438060 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.599e-79
Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A    PKSPSKA KSPKKA
Sbjct:   11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKEPTPKSPSKAAKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1LCN7|A0A2U1LCN7_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA317410 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.779e-79
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A  + PKSPSK  KSPKKA
Sbjct:   11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKVGKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6L2P3X2|A0A6L2P3X2_TANCI (Histone H2A OS=Tanacetum cinerariifolium OX=118510 GN=Tci_065186 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.815e-79
Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GRK GGPRKKSVTRSVKAGLQFPVG IGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND +LGKLL+GVTIAHGGVLPNINPVLLPK+T A  + PKSPSKA KSPKKA
Sbjct:   11 AAGRKAGGPRKKSVTRSVKAGLQFPVGIIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDTKLGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKAGKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2U1KNS1|A0A2U1KNS1_ARTAN (Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_AA581510 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 9.185e-79
Identity = 120/138 (86.96%), Postives = 128/138 (92.75%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKK 139
            A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LKKGRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+LLA+RND+ELGKLL+GVTIAHGGVLPNINPVLLPK+T A  + PKSPSK  KSPKK
Sbjct:   11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKTAAKESTPKSPSKVGKSPKK 148
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251UI95|A0A251UI95_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0175791 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.216e-78
Identity = 121/139 (87.05%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GRK GGPRKKSVTRSVKAGLQFPVGRIGR+LK GRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI+PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK++ AAA   KSP K  KSPKKA
Sbjct:   11 AAGRKAGGPRKKSVTRSVKAGLQFPVGRIGRYLKHGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRITPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKSAAAAKETKSPVKPGKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2G2VP50|A0A2G2VP50_CAPBA (Histone H2A OS=Capsicum baccatum OX=33114 GN=CQW23_26523 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.260e-78
Identity = 122/139 (87.77%), Postives = 127/139 (91.37%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            A GR  GGP+KK V+RSVKAGLQFPVGRIGRFLKKGRYA RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRHLLLAVRND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T  A  APKSPSKA KSPKKA
Sbjct:   11 AAGRSRGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAHRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGTAEKAPKSPSKATKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JH68|A0A396JH68_MEDTR (Histone H2A OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0327951 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.907e-78
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            PRKKSVTRS +AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E AAT  KSPSKA KSPKKA
Sbjct:   55 PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSKATKSPKKA 185
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU68|H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.683e-80
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            PRKKSVTRS +AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E AAT  KSPSKA KSPKKA
Sbjct:   18 PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSKATKSPKKA 148
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40281|H2A2_PEA (Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 6.455e-80
Identity = 124/132 (93.94%), Postives = 131/132 (99.24%), Query Frame = 0 
Query:    9 GPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            GPRKK+VTRSV+AGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPKRTE+AA+APKSPSKA+K+PKKA
Sbjct:   18 GPRKKAVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTESAASAPKSPSKAKKTPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P19177|H2A_PETCR (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 7.206e-79
Identity = 121/132 (91.67%), Postives = 124/132 (93.94%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRT-EAAATAPKSPSKARKSPKKA 140
            PRKKSVTRSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRHLLLAVRND+ELGKLLAGVT AHGGVLPNINPVLLPK+T E AA  PKSPSKA KSPKKA
Sbjct:   18 PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P02277|H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.589e-75
Identity = 118/141 (83.69%), Postives = 127/141 (90.07%), Query Frame = 0 
Query:    4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAA----TAPKSPSKARKSPKKA 140
            G+K GGPRKKSVTRS+KAGLQFPVGRIGR+LKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAA+DNKK+RI PRHLLLAVRNDQELG+LLAGVTIAHGGV+PNINPVLLPK+    A    T  KSP KA KSPKKA
Sbjct:   11 GKKFGGPRKKSVTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKAAEKAEKAGTKAKSPKKATKSPKKA 151
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 8.600e-75
Identity = 111/134 (82.84%), Postives = 124/134 (92.54%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
            P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+    PKSPSKA KSPKK+
Sbjct:   20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25469|H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.518e-74
Identity = 118/140 (84.29%), Postives = 129/140 (92.14%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSP-SKARKSPKKA 140
            AGGRKGG PRKKSVT+S+KAGLQFPVGRIGR+LKKGRYAQRVG+GAP+YLAAVLEYLAAEVLELAGNAARDNKK+RI PRH+LLAVRND+ELGKLLAGVTIA GGVLPNINPVLLPK++  A    KSP +KA KSPKKA
Sbjct:   10 AGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS--AVAEEKSPKAKAGKSPKKA 146
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.969e-74
Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLL----PKRTEAAATAPKSPSKARKSPKKA 140
            AG RKGGGP+KK V+RSVKAGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINPVLL     K   AA   PKSP+KA KSPKKA
Sbjct:   11 AGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1S053|H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula OX=3880 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.988e-73
Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = 0 
Query:    9 GPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSP--SKARKSPKKA 140
            GPRKKSVTRS++AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRHLLLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+TE A T  K P  +KA KSPKKA
Sbjct:   19 GPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTERANTGGKEPKTTKAGKSPKKA 152
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q75L11|H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0113900 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.787e-73
Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0 
Query:    4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAP 127
            GRK GGP+KK V+RSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T   A  P
Sbjct:   15 GRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKP 138
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2XZN0|H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.787e-73
Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0 
Query:    4 GRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAP 127
            GRK GGP+KK V+RSVKAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T   A  P
Sbjct:   15 GRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKP 138
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606)

HSP 1 Score: 222.631 bits (566), Expect = 8.798e-76
Identity = 111/134 (82.84%), Postives = 124/134 (92.54%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
            P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+    PKSPSKA KSPKK+
Sbjct:   20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 211.846 bits (538), Expect = 1.345e-71
Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 0 
Query:    2 AGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            AGGRKGG  RKKSV++SVKAGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI+PRHL LA+RND+ELG+LL GVTIA GGVLPNINPVLLPK++ A+++  +  S A KSPKKA
Sbjct:   14 AGGRKGG-DRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEKAS-ATKSPKKA 150
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G02560.2 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=177 | 201606)

HSP 1 Score: 210.305 bits (534), Expect = 1.255e-70
Identity = 111/158 (70.25%), Postives = 124/158 (78.48%), Query Frame = 0 
Query:   10 PRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAE------------------------VLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAAT---APKSPSKARKSPKKA 140
            P+KK V+RSVK+GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAE                        VLELAGNAARDNKKNRI PRH+LLAVRND+ELG LL GVTIAHGGVLPNINP+LLPK++E AA+    PKSPSKA KSPKK+
Sbjct:   20 PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606)

HSP 1 Score: 205.297 bits (521), Expect = 4.787e-69
Identity = 106/139 (76.26%), Postives = 119/139 (85.61%), Query Frame = 0 
Query:    3 GGRKG-GGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA 140
            GGRK  G P+ KSV++S+KAGLQFPVGRI RFLKKGRYAQR+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+RI PRHLLLA+RND+ELGKLL+GVTIAHGGVLPNIN VLLPK++       K+     KSPKKA
Sbjct:   12 GGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSPVKSPKKA 150
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 182.956 bits (463), Expect = 2.048e-60
Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0 
Query:    7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAA 123
            G G  KK+ TRS KAGLQFPVGRI RFLKKG+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPK+T A+
Sbjct:    9 GSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGAS 125
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 178.333 bits (451), Expect = 1.207e-58
Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 0 
Query:    3 GGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
            G + G G  KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:    5 GKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606)

HSP 1 Score: 178.333 bits (451), Expect = 1.207e-58
Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 0 
Query:    3 GGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
            G + G G  KKS +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:    5 GKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606)

HSP 1 Score: 177.948 bits (450), Expect = 1.952e-58
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = 0 
Query:    7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAA 123
            G G  KKS +RS KAGLQFPVGRI RFLK G+YA RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPK+  A+
Sbjct:    9 GSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGAS 125
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606)

HSP 1 Score: 176.022 bits (445), Expect = 1.023e-57
Identity = 90/123 (73.17%), Postives = 103/123 (83.74%), Query Frame = 0 
Query:    7 GGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKRTEAAATAPKS 129
            G G  KK+ +RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGV+PNI+ +LLPK+  A A+ P+ 
Sbjct:    9 GSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK--AGASKPQE 129
[Close]
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606)

HSP 1 Score: 174.866 bits (442), Expect = 4.733e-57
Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 0 
Query:    3 GGRKGGGPR-KKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGVTIAHGGVLPNINPVLLPKR 119
            GGR  G P+  KSV+RS KAGLQFPVGRI RFLK G+YA+RVG GAPVYL+AVLEYLAAEVLELAGNAARDNKK RI PRH+ LAVRND+EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:   12 GGR--GKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A251U753|A0A251U753_HELAN3.895e-8089.21Histone H2A OS=Helianthus annuus OX=4232 GN=HannXR... [more]
tr|A0A7N2KPH4|A0A7N2KPH4_QUELO4.838e-8087.05Histone H2A OS=Quercus lobata OX=97700 PE=3 SV=1[more]
tr|A0A371F2C4|A0A371F2C4_MUCPR1.133e-7989.63Histone H2A (Fragment) OS=Mucuna pruriens OX=15765... [more]
tr|A0A2U1LYV8|A0A2U1LYV8_ARTAN2.599e-7987.77Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A... [more]
tr|A0A2U1LCN7|A0A2U1LCN7_ARTAN2.779e-7987.05Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A... [more]
tr|A0A6L2P3X2|A0A6L2P3X2_TANCI3.815e-7987.77Histone H2A OS=Tanacetum cinerariifolium OX=118510... [more]
tr|A0A2U1KNS1|A0A2U1KNS1_ARTAN9.185e-7986.96Histone H2A OS=Artemisia annua OX=35608 GN=CTI12_A... [more]
tr|A0A251UI95|A0A251UI95_HELAN4.216e-7887.05Histone H2A OS=Helianthus annuus OX=4232 GN=HannXR... [more]
tr|A0A2G2VP50|A0A2G2VP50_CAPBA4.260e-7887.77Histone H2A OS=Capsicum baccatum OX=33114 GN=CQW23... [more]
tr|A0A396JH68|A0A396JH68_MEDTR5.907e-7890.08Histone H2A OS=Medicago truncatula OX=3880 GN=Mtru... [more]
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BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q2HU68|H2A1_MEDTR2.683e-8090.08Probable histone H2A.1 OS=Medicago truncatula OX=3... [more]
sp|P40281|H2A2_PEA6.455e-8093.94Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
sp|P19177|H2A_PETCR7.206e-7991.67Histone H2A OS=Petroselinum crispum OX=4043 PE=2 S... [more]
sp|P02277|H2A3_WHEAT1.589e-7583.69Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 ... [more]
sp|Q9LZ46|H2A4_ARATH8.600e-7582.84Probable histone H2A.4 OS=Arabidopsis thaliana OX=... [more]
sp|P25469|H2A1_SOLLC1.518e-7484.29Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2... [more]
sp|Q9M531|H2A_EUPES4.969e-7485.31Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1[more]
sp|Q1S053|H2A3_MEDTR3.988e-7388.06Probable histone H2A.3 OS=Medicago truncatula OX=3... [more]
sp|Q75L11|H2A6_ORYSJ7.787e-7387.90Probable histone H2A.6 OS=Oryza sativa subsp. japo... [more]
sp|A2XZN0|H2A6_ORYSI7.787e-7387.90Probable histone H2A.6 OS=Oryza sativa subsp. indi... [more]
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BLAST of Vfaba.Hedin2.R1.1g035840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT5G02560.18.798e-7682.84| histone H2A 12 | Chr5:575437-576456 FORWARD LENG... [more]
AT5G27670.11.345e-7179.14| histone H2A 7 | Chr5:9792807-9793365 REVERSE LEN... [more]
AT5G02560.21.255e-7070.25| histone H2A 12 | Chr5:575437-576456 FORWARD LENG... [more]
AT5G59870.14.787e-6976.26| histone H2A 6 | Chr5:24115605-24116144 REVERSE L... [more]
AT1G51060.12.048e-6077.78| histone H2A 10 | Chr1:18926948-18927443 FORWARD ... [more]
AT4G27230.21.207e-5876.07| histone H2A 2 | Chr4:13637515-13638325 REVERSE L... [more]
AT4G27230.11.207e-5876.07| histone H2A 2 | Chr4:13637515-13638325 REVERSE L... [more]
AT3G20670.11.952e-5876.07| histone H2A 13 | Chr3:7229472-7229963 FORWARD LE... [more]
AT5G54640.11.023e-5773.17| Histone superfamily protein | Chr5:22196540-2219... [more]
AT1G08880.14.733e-5776.27| Histone superfamily protein | Chr1:2847144-28476... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 71..85
score: 74.67
coord: 42..57
score: 86.43
coord: 57..70
score: 89.46
coord: 99..117
score: 75.79
coord: 13..35
score: 68.74
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 11..119
IPR002119Histone H2ACDDcd00074H2Acoord: 14..118
e-value: 5.38582E-64
score: 189.083
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..129
e-value: 7.0E-63
score: 212.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..123
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..124
e-value: 6.2E-17
score: 61.0
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..88
e-value: 2.9E-11
score: 43.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..140

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1; organism=Vicia faba; type=mRNA; length=423bp
ATGGCCGGAGGAAGGAAAGGAGGAGGACCAAGGAAGAAGTCAGTCACCAG
ATCTGTCAAAGCCGGACTTCAATTCCCAGTCGGAAGAATTGGTCGATTCT
TGAAGAAAGGTAGATATGCTCAGCGTGTTGGTACCGGTGCTCCTGTTTAC
TTGGCCGCTGTTCTTGAATATCTTGCTGCTGAGGTTCTTGAGTTGGCTGG
AAATGCTGCTCGTGATAACAAGAAGAATAGAATCAGTCCAAGACATTTGT
TGTTGGCAGTGAGGAATGATCAAGAGCTTGGAAAACTGCTTGCTGGTGTT
ACTATTGCTCATGGTGGGGTTCTTCCCAACATCAACCCCGTGCTTTTGCC
AAAGAGGACCGAAGCTGCTGCTACTGCTCCCAAGTCTCCTTCCAAGGCCA
GGAAATCTCCCAAGAAGGCTTAG
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protein sequence of Vfaba.Hedin2.R1.1g035840.1_vfh_v1

>Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=140bp
MAGGRKGGGPRKKSVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGTGAPVY
LAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDQELGKLLAGV
TIAHGGVLPNINPVLLPKRTEAAATAPKSPSKARKSPKKA
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mRNA from alignment at chr1S:230403052..230403557-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.1g035840.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g035840.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g035840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:230403052..230403557- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
Vocabulary: Molecular Function
TermDefinition
GO:0030527structural constituent of chromatin
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome