Vfaba.Hedin2.R1.1g040720.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|G7IRR9|G7IRR9_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11408898 PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 2.842e-74 Identity = 114/139 (82.01%), Postives = 123/139 (88.49%), Query Frame = 0 Query: 1 MLNPIGLILFSLSLIITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNS--HNHNDNDPCTSSKCSPF-PLAVEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPEV 136 M+NPIG L SLSL+ TI TSQERAPHGLVYQNP+AFSPSAYEFFHPNS H+H +DPCTSSKCSP PLAVEATQIHESKG K ++G K +GAGGI+GIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQP V Sbjct: 1 MINPIGFFLISLSLV-TIVTSQERAPHGLVYQNPEAFSPSAYEFFHPNSQKHDHTKDDPCTSSKCSPMQPLAVEATQIHESKGGKLDKGRKHLGAGGIVGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPPV 138
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XC87|A0A1S2XC87_CICAR (uncharacterized protein LOC101513632 OS=Cicer arietinum OX=3827 GN=LOC101513632 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.781e-63 Identity = 98/136 (72.06%), Postives = 114/136 (83.82%), Query Frame = 0 Query: 1 MLNPIGLILFSLSLIITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLAVEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPEV 136 M N IG L SL L+ +I QERAPHGLVYQNP+AFSPSAYEFFHPNSH DPCTSSKCSP PLAVEATQIHESK SK ++G K+GAGG+ GI+FG+AFVV+LAMSVYH+RVTR+AN+IRAKA++SVQ +V Sbjct: 1 MNNLIGFFLISLPLV-SIVIGQERAPHGLVYQNPEAFSPSAYEFFHPNSHK---VDPCTSSKCSPLPLAVEATQIHESKVSKLDKGRTKLGAGGVAGIVFGLAFVVLLAMSVYHIRVTRRANVIRAKASDSVQLDV 132
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|V7BW86|V7BW86_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G135400g PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 5.177e-54 Identity = 91/136 (66.91%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 2 LNPIGLILFSLSLIIT--IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQ 133 +NPIGL L SL + I T+QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PLA VEAT+IHESK +G KK+GAGGI GIIFGVAFVVVLAM VYHVRVTR+ NM RA+ N +VQ Sbjct: 1 MNPIGLSLLSLVSLALVSIVTAQERAPHGLVYENPEAFSPSAYSFFHPNEKKPETRDPCAASKCSPMPLAAQVEATEIHESKAKTHEEGRKKLGAGGIAGIIFGVAFVVVLAMGVYHVRVTRRTNMSRARDNGAVQ 136
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PUJ9|A0A0B2PUJ9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_034431 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.750e-53 Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 0 Query: 2 LNPIGLILFSLSLI--ITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPE 135 +NPIG L SL+ + ++I +QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PLA VEAT+IHESK S K++GAG + GIIFGVAFVV+LA+ VYHVRVTR+ANM +AKAN +VQP+ Sbjct: 1 MNPIGFSLLSLASLALVSIVIAQERAPHGLVYENPEAFSPSAYNFFHPNERKPETKDPCAASKCSPMPLAAQVEATEIHESKASTPQGSKKQLGAGSVAGIIFGVAFVVLLALGVYHVRVTRRANMSKAKANGAVQPD 138
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|I1LTI2|I1LTI2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818411 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.243e-53 Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 0 Query: 2 LNPIGLILFSLSLI--ITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPE 135 +NPIG L SL+ + ++I +QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PLA VEAT+IHESK S K++GAG + GIIFGVAFVV+LA+ VYHVRVTR+ANM +AKAN +VQP+ Sbjct: 37 MNPIGFSLLSLASLALVSIVIAQERAPHGLVYENPEAFSPSAYNFFHPNERKPETKDPCAASKCSPMPLAAQVEATEIHESKASTPQGSKKQLGAGSVAGIIFGVAFVVLLALGVYHVRVTRRANMSKAKANGAVQPD 174
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1R732|A0A4P1R732_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30204 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.610e-50 Identity = 87/136 (63.97%), Postives = 102/136 (75.00%), Query Frame = 0 Query: 2 LNPIGL-ILFSLSL-IITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQ 133 +NPI F LS+ +++ QERAPHGL Y+NP+AF PSAY FFHPN+ NDPC +SKCSP PLA VEATQIHESKGS S +GGK++G G I IIFGVAFVV LAM V+HVRVTR+ N+I KANNSVQ Sbjct: 1 MNPISFSFFFLLSIALVSAVIGQERAPHGLAYENPEAFPPSAYNFFHPNAKKPETNDPCAASKCSPLPLAAQVEATQIHESKGSTSEKGGKQLGPGVIACIIFGVAFVVFLAMIVHHVRVTRRNNII--KANNSVQ 134
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N6H4|A0A4D6N6H4_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g555 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.137e-49 Identity = 78/121 (64.46%), Postives = 92/121 (76.03%), Query Frame = 0 Query: 18 IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQPEV 136 I +QERAPHGLVY+NP+AFSPSAY FFHPN +PC +SKCSP PLA VEAT+IHES+ +G +K+GAGG+ GI+FGVAFVVVLAM VYHVRVTR+ NM RA N +VQ V Sbjct: 19 IVIAQERAPHGLVYENPEAFSPSAYNFFHPNEKKPETKNPCAASKCSPMPLAAQVEATEIHESRAKTLERGSRKLGAGGLAGIVFGVAFVVVLAMGVYHVRVTRRTNMSRANHNGAVQTHV 139
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SGL6|A0A0S3SGL6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G061400 PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.372e-47 Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 0 Query: 2 LNPIGLILFSLSLIIT--IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQ 133 +NP+GL L SL + I +QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PL VEAT+IHES+ G +K+GAGGI GI+FGVAFVVVLAM VYHVR TR +M RAK + VQ Sbjct: 1 MNPVGLCLLSLVSLTLVSIVIAQERAPHGLVYENPEAFSPSAYNFFHPNEKKPETRDPCATSKCSPMPLVAQVEATEIHESRAKTPEGGSRKLGAGGIAGIVFGVAFVVVLAMGVYHVRFTRPTSMSRAKHSGVVQ 136
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UNS3|A0A0L9UNS3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g179400 PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.372e-47 Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 0 Query: 2 LNPIGLILFSLSLIIT--IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQ 133 +NP+GL L SL + I +QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PL VEAT+IHES+ G +K+GAGGI GI+FGVAFVVVLAM VYHVR TR +M RAK + VQ Sbjct: 1 MNPVGLCLLSLVSLTLVSIVIAQERAPHGLVYENPEAFSPSAYNFFHPNEKKPETRDPCATSKCSPMPLVAQVEATEIHESRAKTPEGGSRKLGAGGIAGIVFGVAFVVVLAMGVYHVRFTRPTSMSRAKHSGVVQ 136
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TUS7|A0A1S3TUS7_VIGRR (uncharacterized protein LOC106759005 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759005 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.920e-47 Identity = 76/118 (64.41%), Postives = 86/118 (72.88%), Query Frame = 0 Query: 18 IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDNDPCTSSKCSPFPLA--VEATQIHESKGSKSNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNSVQ 133 I +QERAPHGLVY+NP+AFSPSAY FFHPN DPC +SKCSP PL VEAT+IHES+ G +K+GAGGI GI+FGVAFVVVLAM VYHVR TR NM R K + VQ Sbjct: 19 IVVAQERAPHGLVYENPEAFSPSAYNFFHPNEKKPESRDPCATSKCSPMPLVAQVEATEIHESRAKTPEGGSRKLGAGGIAGIVFGVAFVVVLAMGVYHVRFTRPTNMSRPKHSGVVQ 136
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. Araport11
Match: AT2G28410.1 (| transmembrane protein | Chr2:12156202-12156549 FORWARD LENGTH=115 | 201606) HSP 1 Score: 86.2705 bits (212), Expect = 1.379e-22 Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = 0 Query: 1 MLNPIGLILFSLSLIIT-IATSQERAPHGLVYQNPKAFSPSAYEFFHPNSHNHNDN-DPCTSSKCSPFPLAVE----ATQIHESKGSKSNQGGKK-IGAGGIIGIIFGVAFVVVL 108 M + L+ F SLI+T A +Q+RAPHGL Y+ P AFSPSA++FFH N + +PC+ S CSP P+A + + + ES + G + I G++GIIFG+AF V++ Sbjct: 1 MTSKTCLVFFFSSLILTNFALAQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPCSESGCSPLPVAAKVQGASAKAQESDIVSISTGTRSGIEEHGVVGIIFGLAFAVMM 115
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. Araport11
Match: AT5G60650.1 (| proline-rich receptor-like kinase | Chr5:24374305-24374748 REVERSE LENGTH=147 | 201606) HSP 1 Score: 69.3218 bits (168), Expect = 1.213e-15 Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 0 Query: 7 LILFS-LSLIITIATSQERAPHGLVYQNPKAFSPSAYEFFHPNS--HNHNDNDPCTSSKCSPFPLAVEATQIHE--SKGSK--------SNQGGKKIGAGGIIGIIFGVAFVVVLAMSVYHVRVTRKANMIRAKANNS 131 L FS LS+++ ++ + R HG Y NP AFSP AY+FFHP S +HN N P +S + T I E S+GSK S ++ G G IG++ G++F+ L++ +Y V ++AN+IR +S Sbjct: 9 LFFFSCLSMLLCVSIAGSRPVHGPAYTNPSAFSPQAYDFFHPKSSLSDHN-NPPKSSPSPLSLSPSPSKTSIVEPDSQGSKVSSDEHTTSESRREEEGRGETIGVVLGLSFIAFLSLGIYFVIKKQRANIIRTIVTHS 145 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.1g040720.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g040720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g040720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g040720.1; organism=Vicia faba; type=mRNA; length=411bpback to top protein sequence of Vfaba.Hedin2.R1.1g040720.1_vfh_v1 >Vfaba.Hedin2.R1.1g040720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g040720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g040720.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=136bpback to top mRNA from alignment at chr1S:266581565..266581975+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g040720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g040720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g040720.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:266581565..266581975+ (Vicia fababack to top |