Vfaba.Hedin2.R1.1g057440.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XFX6|A0A1S2XFX6_CICAR (RING-box protein 1a-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101503002 PE=4 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.545e-77 Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP G++SC G SSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPAGDTSCCAGPSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6J1DPM4|A0A6J1DPM4_MOMCH (RING-box protein 1a-like OS=Momordica charantia OX=3673 GN=LOC111021926 PE=4 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 2.195e-77 Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+KKPKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4A6G4|A0A6P4A6G4_ZIZJJ (RING-box protein 1a OS=Ziziphus jujuba OX=326968 GN=LOC107423885 PE=4 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 2.195e-77 Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+KKPKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|G7IKI7|G7IKI7_MEDTR (Anaphase-promoting complex subunit 11 RING-H2 finger protein OS=Medicago truncatula OX=3880 GN=11413962 PE=4 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 2.423e-77 Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSC-SHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+SC +HG SSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPAGETSCCAHGGPSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A314YTK2|A0A314YTK2_PRUYE (RING-box protein 1a OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_37001 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.168e-77 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+K+PKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4Y1R040|A0A4Y1R040_PRUDU (PREDICTED: RING-box OS=Prunus dulcis OX=3755 GN=ALMOND_2B022646 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.168e-77 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+K+PKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6J5U0H2|A0A6J5U0H2_PRUAR (RING-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS15652 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.168e-77 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+K+PKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|M5X2V0|M5X2V0_PRUPE (RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G152700 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.168e-77 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPMVP GE+S S G SS+K+PKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMVPVGEASSSAGPSSTKRPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A540LC82|A0A540LC82_MALBA (RING-type domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_030472 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.341e-77 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPM+P GE S S G SS+KKPKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMIPAGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A498JHP5|A0A498JHP5_MALDO (RING-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_014140 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 5.341e-77 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDVPM+P GE S S G SS+KKPKRFEIKKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVPMIPAGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q940X7|RBX1A_ARATH (RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.532e-71 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASS-SKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDV M+P GE+S S ASS +KK KRFEIKKW+AV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|P62878|RBX1_MOUSE (E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.149e-64 Identity = 92/116 (79.31%), Postives = 96/116 (82.76%), Query Frame = 0 Query: 2 ATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
A +D D P G +S KRFE+KKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 3 AAMDVDTP----------SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|P62877|RBX1_HUMAN (E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.149e-64 Identity = 92/116 (79.31%), Postives = 96/116 (82.76%), Query Frame = 0 Query: 2 ATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
A +D D P G +S KRFE+KKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 3 AAMDVDTP----------SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8QG64|RBX1_SALSA (RING-box protein 1 OS=Salmo salar OX=8030 GN=rbx1 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 1.628e-63 Identity = 94/116 (81.03%), Postives = 99/116 (85.34%), Query Frame = 0 Query: 2 ATLDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
A +D D P S+ + GAS KRFE+KKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 3 AAMDVDTP------SATNSGAS----KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9W5E1|RBX1A_DROME (RING-box protein 1A OS=Drosophila melanogaster OX=7227 GN=Roc1a PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.578e-62 Identity = 91/114 (79.82%), Postives = 97/114 (85.09%), Query Frame = 0 Query: 4 LDSDVPMVPTGESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
+D D VP+ +SS KRFE+KKWNAV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH
Sbjct: 3 VDEDGYEVPS--------SSSKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKYGH 108
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M2B0|RBX1B_ARATH (RING-box protein 1b OS=Arabidopsis thaliana OX=3702 GN=RBX1B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.806e-60 Identity = 98/118 (83.05%), Postives = 103/118 (87.29%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKP-KRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MA+L+SDV M GESS SSS K KRFE+KKW+AV+LWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD EWEFQKYGH
Sbjct: 1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54K33|RBX1_DICDI (RING-box protein 1 OS=Dictyostelium discoideum OX=44689 GN=rbx1 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 9.423e-59 Identity = 82/98 (83.67%), Postives = 91/98 (92.86%), Query Frame = 0 Query: 21 GASSSKKPKR-FEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
+S+SK PK+ FE+K+WNAV+LW WDIVVDNCAICRNHIMDLCIECQANQAS TSEECTVAWG+CNHAFHFHCISRWLK+RQVCPLDN +WEFQKYG
Sbjct: 7 SSSASKTPKKKFEVKRWNAVALWIWDIVVDNCAICRNHIMDLCIECQANQASNTSEECTVAWGICNHAFHFHCISRWLKSRQVCPLDNRDWEFQKYGR 104
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q23457|RBX1_CAEEL (RING-box protein 1 OS=Caenorhabditis elegans OX=6239 GN=rbx-1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.274e-57 Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 0 Query: 22 ASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
A++ KRFE+KKW+AV+LWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH
Sbjct: 15 ATNQTVKKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|O13959|RBX1_SCHPO (RING-box protein pip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pip1 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 9.610e-57 Identity = 78/93 (83.87%), Postives = 83/93 (89.25%), Query Frame = 0 Query: 25 SKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
+KP RFEIKKWNAV+LW WDIVVDNCAICRNHIMDLCIECQAN SA ++ECTVAWG CNHAFHFHCISRWL TR VCPLDN EWEFQ+YGH
Sbjct: 15 EQKPPRFEIKKWNAVALWQWDIVVDNCAICRNHIMDLCIECQANTDSAAAQECTVAWGTCNHAFHFHCISRWLNTRNVCPLDNREWEFQRYGH 107
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9NHX0|RBX1B_DROME (RING-box protein 1B OS=Drosophila melanogaster OX=7227 GN=Roc1b PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.322e-46 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 15 ESSCSHGASSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 116
E SCS GA ++ +RF +KKW A ++W WD+ VDNCAICRNHIM+LCIECQA+ +A +ECTVAWG CNHAFH+HCI+RWLKTR VCPLDN EW +QKYG
Sbjct: 22 EPSCSGGAVQAR-TERFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQAD-PNANQDECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT5G20570.1 (| RING-box 1 | Chr5:6956905-6958221 REVERSE LENGTH=118 | 201606) HSP 1 Score: 210.305 bits (534), Expect = 8.729e-72 Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASS-SKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDV M+P GE+S S ASS +KK KRFEIKKW+AV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT5G20570.3 (| RING-box 1 | Chr5:6956905-6958221 REVERSE LENGTH=136 | 201606) HSP 1 Score: 197.978 bits (502), Expect = 1.135e-66 Identity = 105/136 (77.21%), Postives = 110/136 (80.88%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASS-SKKPKRFEIKKWNAVSLWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDV M+P GE+S S ASS +KK KRFEIKKW+AV+LWAW IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWGNLENPYTLSSIGLSMFRYIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 136
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT5G20570.2 (| RING-box 1 | Chr5:6956905-6958221 REVERSE LENGTH=142 | 201606) HSP 1 Score: 196.438 bits (498), Expect = 5.551e-66 Identity = 106/142 (74.65%), Postives = 111/142 (78.17%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASS-SKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MATLDSDV M+P GE+S S ASS +KK KRFEIKKW+AV+LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWEDDQNNCNKYFCILDCSMKDDHLEGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 142
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G42830.1 (| RING/U-box superfamily protein | Chr3:14929714-14930678 REVERSE LENGTH=115 | 201606) HSP 1 Score: 182.956 bits (463), Expect = 4.917e-61 Identity = 98/118 (83.05%), Postives = 103/118 (87.29%), Query Frame = 0 Query: 1 MATLDSDVPMVPTGESSCSHGASSSKKP-KRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117
MA+L+SDV M GESS SSS K KRFE+KKW+AV+LWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD EWEFQKYGH
Sbjct: 1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.6 (| anaphase-promoting complex/cyclosome 11 | Chr3:1753961-1754802 FORWARD LENGTH=87 | 201606) HSP 1 Score: 67.3958 bits (163), Expect = 7.069e-16 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 27 KPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
K K I W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.2 (| anaphase-promoting complex/cyclosome 11 | Chr3:1753961-1754802 FORWARD LENGTH=87 | 201606) HSP 1 Score: 67.3958 bits (163), Expect = 7.069e-16 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 27 KPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
K K I W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.1 (| anaphase-promoting complex/cyclosome 11 | Chr3:1753961-1754802 FORWARD LENGTH=87 | 201606) HSP 1 Score: 67.3958 bits (163), Expect = 7.069e-16 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 27 KPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
K K I W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 2 KVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.7 (| anaphase-promoting complex/cyclosome 11 | Chr3:1754400-1754802 FORWARD LENGTH=78 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 3.373e-15 Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0 Query: 35 KWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
+W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 1 RWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 78
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.5 (| anaphase-promoting complex/cyclosome 11 | Chr3:1754275-1754802 FORWARD LENGTH=90 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 5.372e-15 Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0 Query: 35 KWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
+W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 13 EWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Match: AT3G05870.4 (| anaphase-promoting complex/cyclosome 11 | Chr3:1754275-1754802 FORWARD LENGTH=90 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 5.372e-15 Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0 Query: 35 KWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQK 114
+W+AV+ W WD + C ICR C +C+ ++C + WG CNHAFH HCI +W+ ++ CP+ EW+F++
Sbjct: 13 EWHAVASWTWDAQDETCGICRMAFDGCCPDCKL-----PGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g057440.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g057440.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g057440.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g057440.1; organism=Vicia faba; type=mRNA; length=354bpback to top protein sequence of Vfaba.Hedin2.R1.1g057440.1_vfh_v1 >Vfaba.Hedin2.R1.1g057440.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g057440.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g057440.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=117bpback to top mRNA from alignment at chr1S:363872524..363875960- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g057440.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g057440.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g057440.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:363872524..363875960- (Vicia fababack to top |