Vfaba.Hedin2.R1.1g062000.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251U753|A0A251U753_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0227831 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.460e-85 Identity = 129/150 (86.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+++ KVKKGA GRK GGPRKK+VTRSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLA+RNDEELGKLLAGVTIAHGGVLPNINP+LLPK+T +AKEPKSPSKA K+PKKA
Sbjct: 1 MESTGKVKKGAAGRKAGGPRKKAVTRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPILLPKKT---AAKEPKSPSKATKSPKKA 147
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251UN91|A0A251UN91_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0134281 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.042e-83 Identity = 126/150 (84.00%), Postives = 141/150 (94.00%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+A+ K KKGA GRK GGPRKK+VTRS+RAGLQFPVGRIGR+LK GRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR++PRH+LLA+RND+ELGKLLAGVTIAHGGVLPNINPVLLPK+T +AKEPKSP+KA K+PKKA
Sbjct: 1 MEATGKAKKGAAGRKAGGPRKKAVTRSIRAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKT---AAKEPKSPAKATKSPKKA 147
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2J6LEZ7|A0A2J6LEZ7_LACSA (Histone H2A OS=Lactuca sativa OX=4236 GN=LSAT_2X110521 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 1.402e-83 Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDA TKVKKGA GRK GGP+KK V+RSV+AGLQFPVGR+GRFLKKG+YA+RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLAVRNDEELGKLL+GVTIAHGGVLPNINPVLLPK+ + + KEPKSPSKA K+PKKA
Sbjct: 1 MDAGTKVKKGAAGRKAGGPKKKPVSRSVKAGLQFPVGRLGRFLKKGQYAKRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKALDKATKEPKSPSKATKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N9C1|A0A2K3N9C1_TRIPR (Histone H2A OS=Trifolium pratense OX=57577 GN=L195_g022916 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 6.229e-83 Identity = 125/150 (83.33%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+A+ K GAGGRKGG RKK+VTRS RAGLQFPVGRIGR+LKKGRYA+R+GTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINP+LLPK+ E A+AKEPKSPSKA K+PK A
Sbjct: 1 MEATKTKKVGAGGRKGGESRKKAVTRSTRAGLQFPVGRIGRYLKKGRYAKRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPILLPKKNEKAAAKEPKSPSKAGKSPKNA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A164WHA7|A0A164WHA7_DAUCS (Histone H2A OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020857 PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.287e-82 Identity = 125/150 (83.33%), Postives = 137/150 (91.33%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+ KVKKGA GRK GGP+KK V+RSV+AGL FPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK+R+ PRHLLLA+RNDEELGKLLAGVTIAHGGVLPNINPVLLPK++E AS + KSPSKA K+P+KA
Sbjct: 1 MEGGGKVKKGAAGRKAGGPKKKPVSRSVKAGLTFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKASQESTKSPSKATKSPRKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3B6PK12|A0A3B6PK12_WHEAT (Histone H2A OS=Triticum aestivum OX=4565 PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.333e-82 Identity = 126/155 (81.29%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 1 MDASTKV-----KKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDAS V KKGA GRK GGPRKKSV+RSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAE+LELAGNAA+DNKK+R+ PRHLLLA+RNDEELGKLLAG+TIAHGGV+PNINPVLLPK+T S KEPKSP K K+PKKA
Sbjct: 1 MDASATVATGKGKKGAAGRKAGGPRKKSVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAIRNDEELGKLLAGITIAHGGVIPNINPVLLPKKTAEKSPKEPKSPKKTAKSPKKA 155
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A446W5A9|A0A446W5A9_TRITD (Histone H2A OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G050180 PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.333e-82 Identity = 126/155 (81.29%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 1 MDASTKV-----KKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDAS V KKGA GRK GGPRKKSV+RSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAE+LELAGNAA+DNKK+R+ PRHLLLA+RNDEELGKLLAG+TIAHGGV+PNINPVLLPK+T S KEPKSP K K+PKKA
Sbjct: 1 MDASATVATGKGKKGAAGRKAGGPRKKSVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAELLELAGNAAKDNKKSRIIPRHLLLAIRNDEELGKLLAGITIAHGGVIPNINPVLLPKKTAEKSPKEPKSPKKTAKSPKKA 155
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A251SL05|A0A251SL05_HELAN (Histone H2A OS=Helianthus annuus OX=4232 GN=H2A PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.565e-82 Identity = 124/150 (82.67%), Postives = 140/150 (93.33%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+A K+KKGA GRK GGP+KK VTRSV+AGLQFPVGRIGR+LK GRYA+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR++PRH+LLAVRND+ELGKLLAGVTIAHGGVLPNINPVLLPK++ + +AKEPKSP+K K+PKKA
Sbjct: 1 MEAGGKLKKGAAGRKAGGPKKKPVTRSVKAGLQFPVGRIGRYLKVGRYAKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHVLLAVRNDDELGKLLAGVTIAHGGVLPNINPVLLPKKSHDKAAKEPKSPAKPTKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6S7MC25|A0A6S7MC25_LACSI (Histone H2A OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS13518 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.374e-82 Identity = 123/150 (82.00%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
M+ TKVKKGA GRK GGP+KK V+RSV+AGLQFPVGR+GRFLKKG+YA+RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+LLAVRNDEELGKLL+GVTIAHGGVLPNINPVLLPK+ + + KEPKSPSKA K+PKKA
Sbjct: 1 METGTKVKKGAAGRKAGGPKKKPVSRSVKAGLQFPVGRLGRFLKKGQYAKRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAVRNDEELGKLLSGVTIAHGGVLPNINPVLLPKKALDKATKEPKSPSKATKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S4CJV9|A0A1S4CJV9_TOBAC (Histone H2A OS=Nicotiana tabacum OX=4097 GN=LOC107819600 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.710e-82 Identity = 129/151 (85.43%), Postives = 137/151 (90.73%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASA-KEPKSPSKAKKTPKKA 150
MD S K KKGA GR+ GGP+KK VTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPK+T A KE KSPSKA K+PKKA
Sbjct: 1 MDTSGKAKKGAAGRRVGGPKKKPVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTGGEKAGKEHKSPSKATKSPKKA 151
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P19177|H2A_PETCR (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.864e-80 Identity = 119/132 (90.15%), Postives = 125/132 (94.70%), Query Frame = 0
Query: 19 PRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
PRKKSVTRSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRHLLLAVRNDEELGKLLAGVT AHGGVLPNINPVLLPK+T +AKEPKSPSKA K+PKKA
Sbjct: 18 PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAEKAAKEPKSPSKAGKSPKKA 149
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40281|H2A2_PEA (Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 2.222e-80 Identity = 142/150 (94.67%), Postives = 146/150 (97.33%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDASTKVKKGAGGRKGGGPRKK+VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+SPRHLLLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPKRTE+A A PKSPSKAKKTPKKA
Sbjct: 1 MDASTKVKKGAGGRKGGGPRKKAVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTESA-ASAPKSPSKAKKTPKKA 149
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25469|H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 6.017e-79 Identity = 123/150 (82.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDA TK KGAGGRKGG PRKKSVT+S++AGLQFPVGRIGR+LKKGRYAQRVG+GAP+YLAAVLEYLAAEVLELAGNAARDNKK+R+ PRH+LLAVRNDEELGKLLAGVTIA GGVLPNINPVLLPK++ A K PK +KA K+PKKA
Sbjct: 1 MDA-TKTTKGAGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSAVAEEKSPK--AKAGKSPKKA 146
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M531|H2A_EUPES (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.161e-78 Identity = 126/153 (82.35%), Postives = 138/153 (90.20%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLL---PKRTENASAKEPKSPSKAKKTPKKA 150
MD K+KKGAG RKGGGP+KK V+RSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINPVLL ++ A+ KEPKSP+KA K+PKKA
Sbjct: 1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU68|H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.970e-78 Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
MDASTK KKGAGGRKGG PRKKSVTRS RAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPK+ E A A KSPSKA K+PKKA
Sbjct: 1 MDASTKTKKGAGGRKGG-PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKA-ATTTKSPSKATKSPKKA 148
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2HU65|H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 8.473e-77 Identity = 137/153 (89.54%), Postives = 144/153 (94.12%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTE--NASAKEPKSPS-KAKKTPKKA 150
MDASTK KKGAGGRKGGGPRKKSVTRS+RAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK+TE N +KEPKSP KA K+PKKA
Sbjct: 1 MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTERSNTVSKEPKSPKPKAGKSPKKA 153
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LZ46|H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 3.888e-76 Identity = 122/153 (79.74%), Postives = 140/153 (91.50%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASA--KEPKSPSKAKKTPKKA 150
MD+ TKVKKGA GR+ GG P+KK V+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELG LL GVTIAHGGVLPNINP+LLPK++E A++ K PKSPSKA K+PKK+
Sbjct: 1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1S053|H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula OX=3880 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.677e-75 Identity = 130/153 (84.97%), Postives = 138/153 (90.20%), Query Frame = 0
Query: 1 MDASTKVKKGAGGR-KGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTE--NASAKEPKSPSKAKKTPKKA 150
MDASTK K G KGGGPRKKSVTRS+RAGLQFPVGRIGR+LKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINP+LLPK+TE N KEPK+ +KA K+PKKA
Sbjct: 1 MDASTKTTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTERANTGGKEPKT-TKAGKSPKKA 152
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P02277|H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.057e-75 Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAK---EPKSPSKAKKTPKKA 150
MDAS K+KK AG +K GGPRKKSVTRS++AGLQFPVGRIGR+LKKGRYAQRVG+GAPVYLAAVLEYLAAEVLELAGNAA+DNKK+R+ PRHLLLAVRND+ELG+LLAGVTIAHGGV+PNINPVLLPK+ + K + KSP KA K+PKKA
Sbjct: 1 MDAS-KLKKVAG-KKFGGPRKKSVTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKAAEKAEKAGTKAKSPKKATKSPKKA 151
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P25470|H2A1_PEA (Histone H2A.1 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.819e-73 Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASA 134
MDASTK KKGAGGRKGGGPRKKSVTRSVRAGLQFPVGR+GRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+SPRHLLLAVRNDEELGKLLAGVTIA+GGVLPNINPVLLPKR ENA+A
Sbjct: 1 MDASTKTKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKRKENAAA 134
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606) HSP 1 Score: 226.483 bits (576), Expect = 3.978e-77 Identity = 122/153 (79.74%), Postives = 140/153 (91.50%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASA--KEPKSPSKAKKTPKKA 150
MD+ TKVKKGA GR+ GG P+KK V+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR+ PRH+LLAVRNDEELG LL GVTIAHGGVLPNINP+LLPK++E A++ K PKSPSKA K+PKK+
Sbjct: 1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 153
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606) HSP 1 Score: 216.853 bits (551), Expect = 1.986e-73 Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 0
Query: 2 DASTKVKKGAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPKSPSKAKKTPKKA 150
A+TK +GAGGRKGG RKKSV++SV+AGLQFPVGRI R+LKKGRYA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNR++PRHL LA+RNDEELG+LL GVTIA GGVLPNINPVLLPK++ +S++ K + A K+PKKA
Sbjct: 5 QATTKPTRGAGGRKGGD-RKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAEK--ASATKSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606) HSP 1 Score: 213.772 bits (543), Expect = 3.212e-72 Identity = 114/153 (74.51%), Postives = 131/153 (85.62%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKG-GGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKR--TENASAKEPKSPSKAKKTPKKA 150
M+++ KVKK GGRK G P+ KSV++S++AGLQFPVGRI RFLKKGRYAQR+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+R+ PRHLLLA+RNDEELGKLL+GVTIAHGGVLPNIN VLLPK+ T+ A K KSP K+PKKA
Sbjct: 1 MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSPV---KSPKKA 150
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT5G02560.2 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=177 | 201606) HSP 1 Score: 214.157 bits (544), Expect = 5.438e-72 Identity = 122/177 (68.93%), Postives = 140/177 (79.10%), Query Frame = 0
Query: 1 MDASTKVKKGAGGRKGGG-PRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAE------------------------VLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASA--KEPKSPSKAKKTPKKA 150
MD+ TKVKKGA GR+ GG P+KK V+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAPVYLAAVLEYLAAE VLELAGNAARDNKKNR+ PRH+LLAVRNDEELG LL GVTIAHGGVLPNINP+LLPK++E A++ K PKSPSKA K+PKK+
Sbjct: 1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPSKATKSPKKS 177
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606) HSP 1 Score: 182.57 bits (462), Expect = 4.020e-60 Identity = 91/120 (75.83%), Postives = 102/120 (85.00%), Query Frame = 0
Query: 10 GAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRT 129
G G G G KK+ TRS +AGLQFPVGRI RFLKKG+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK+T
Sbjct: 3 GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 179.104 bits (453), Expect = 1.111e-58 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 10 GAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKR 128
G G + G G KKS +RS +AGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK+
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 179.104 bits (453), Expect = 1.111e-58 Identity = 89/119 (74.79%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 10 GAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKR 128
G G + G G KKS +RS +AGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK+
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606) HSP 1 Score: 177.563 bits (449), Expect = 3.826e-58 Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 0
Query: 10 GAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKR 128
G G G G KKS +RS +AGLQFPVGRI RFLK G+YA RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK+
Sbjct: 3 GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKK 121
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606) HSP 1 Score: 175.637 bits (444), Expect = 2.070e-57 Identity = 91/129 (70.54%), Postives = 105/129 (81.40%), Query Frame = 0
Query: 10 GAGGRKGGGPRKKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKRTENASAKEPK 138
G G G G KK+ +RS +AGLQFPVGRI RFLK G+YA+RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGV+PNI+ +LLPK+ A A +P+
Sbjct: 3 GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK---AGASKPQ 128
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606) HSP 1 Score: 175.252 bits (443), Expect = 4.804e-57 Identity = 89/122 (72.95%), Postives = 101/122 (82.79%), Query Frame = 0
Query: 10 GAGGRKGGGPR---KKSVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRVSPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKR 128
G+G KGG + KSV+RS +AGLQFPVGRI RFLK G+YA+RVG GAPVYL+AVLEYLAAEVLELAGNAARDNKK R+ PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLP +
Sbjct: 6 GSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g062000.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g062000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g062000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g062000.1; organism=Vicia faba; type=mRNA; length=453bpback to top protein sequence of Vfaba.Hedin2.R1.1g062000.1_vfh_v1 >Vfaba.Hedin2.R1.1g062000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g062000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g062000.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=150bpback to top mRNA from alignment at chr1S:398897255..398897792+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g062000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g062000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g062000.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:398897255..398897792+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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