Vfaba.Hedin2.R1.1g064000.1
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VLF0|A0A072VLF0_MEDTR (60S acidic ribosomal protein OS=Medicago truncatula OX=3880 GN=25487532 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.542e-38 Identity = 100/115 (86.96%), Postives = 110/115 (95.65%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK+IAAYLLAVLGGN +PSA+D+K+IL SVG+EAED NIELL++EVKGKDFAELIASGREKLASVPS GGGAVA+SAA+GGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD
Sbjct: 1 MKIIAAYLLAVLGGNQSPSASDLKQILGSVGVEAEDCNIELLLSEVKGKDFAELIASGREKLASVPS--GGGAVAVSAATGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 113
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|I3SI26|I3SI26_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.636e-37 Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK+IAAYLLAVLGGN +PSA+D+K+IL SVG+EAED NIELL++EVKGKDFAELIASGREKLASVPS GGGAVA+ AA+GGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD
Sbjct: 1 MKIIAAYLLAVLGGNQSPSASDLKQILGSVGVEAEDCNIELLLSEVKGKDFAELIASGREKLASVPS--GGGAVAVFAATGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 113
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A803QAB6|A0A803QAB6_CANSA (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.156e-36 Identity = 93/115 (80.87%), Postives = 103/115 (89.57%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK+IAAYLLAVLGGNAAPSAAD+KKIL+SVGIEAED + L++EVKGKD ELIASGREKLASVPS GGGGAVA SA +GG AAA A AAE+K+E+KVEEKEESDDDMGFSLFD
Sbjct: 1 MKIIAAYLLAVLGGNAAPSAADLKKILSSVGIEAEDEKVNFLLSEVKGKDLTELIASGREKLASVPS-GGGGAVAYSAPAGGAAAAPAAAAESKKEEKVEEKEESDDDMGFSLFD 114
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J6HV12|A0A7J6HV12_CANSA (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023731 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.086e-35 Identity = 91/114 (79.82%), Postives = 101/114 (88.60%), Query Frame = 0
Query: 93 KVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
++IAAYLLAVLGGNA+PSAAD+K IL+SVGIEAED + L+TEVKGKD ELIASGREKLASVPSGGGGGAVA SA SGG AA A AAE+K+E+KVEEKEESDDDMGFSLFD
Sbjct: 65 QIIAAYLLAVLGGNASPSAADLKAILSSVGIEAEDEKVNFLLTEVKGKDLTELIASGREKLASVPSGGGGGAVAYSAPSGGAGAAPAAAAESKKEEKVEEKEESDDDMGFSLFD 178
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P427|A0A2Z6P427_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_107230 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.183e-35 Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKVIAAYLLAVLGGNA+PSA+D+K+IL SVG++AEDSNIELL++EVKGKDFAELIASGREKLASVPSGGG +A+ GGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD
Sbjct: 1 MKVIAAYLLAVLGGNASPSASDVKQILGSVGVDAEDSNIELLLSEVKGKDFAELIASGREKLASVPSGGG---AVAVSAAPGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 112
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N6Z1|A0A2K3N6Z1_TRIPR (60S acidic ribosomal protein p2b-like OS=Trifolium pratense OX=57577 GN=L195_g022071 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.075e-35 Identity = 96/115 (83.48%), Postives = 102/115 (88.70%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK+IAAYLLAVLGGNA+PSAADIK IL SVG+E EDSNIELL++EVKGKDFAELIASGREKLASVPS GGG +A GG AAAAPAAEAKEEKKVEEKEESDDDMGFSLFD
Sbjct: 1 MKIIAAYLLAVLGGNASPSAADIKNILGSVGVEGEDSNIELLLSEVKGKDFAELIASGREKLASVPS-GGGAVAVSAAPGGGAGAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 114
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XD74|A0A1S2XD74_CICAR (60S acidic ribosomal protein P2B-like OS=Cicer arietinum OX=3827 GN=LOC101511804 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.697e-34 Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK+IAAYLL+VLGGN++PSA D+KKIL SVGIEAED IELL+TEVKGKDFAELIASGREKL+SVPS GGGAVA+SAA GGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD
Sbjct: 1 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLSSVPS--GGGAVAVSAAPAGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 113
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2I0WUD8|A0A2I0WUD8_9ASPA (60S acidic ribosomal protein P2B OS=Dendrobium catenatum OX=906689 GN=RPP2B PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.723e-34 Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK++AAYLLAVLGGN+ PSA D+K IL SVG +A+D IE L++EVKGKD ELIASGREK ASVPSGGG AVA SGGG A AAE K+E+KVEEKEESDD MGFSLFD
Sbjct: 1 MKILAAYLLAVLGGNSNPSAHDVKIILESVGADADDGMIEFLLSEVKGKDITELIASGREKFASVPSGGGAVAVAAPVGSGGGGAVTPAAAEPKKEEKVEEKEESDDGMGFSLFD 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5J5UNA8|A0A5J5UNA8_GOSBA (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A08G008300v1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.414e-34 Identity = 96/140 (68.57%), Postives = 109/140 (77.86%), Query Frame = 0
Query: 78 TLNRVLIPLPST-----------SKMKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
T N L+P P KMKV+AAYLLAVLGGNA+PSA D+K IL SVG EA+D IELL++EVKGKD ELIASGREKLASVPS GGGAVA++A + GG +AAAPAAEAK+E+KVEEKEESDDDMGFSLFD
Sbjct: 12 TANPSLLPFPPRLHFHSRSRDIKVKMKVVAAYLLAVLGGNASPSADDLKVILGSVGAEADDDRIELLLSEVKGKDITELIASGREKLASVPS--GGGAVAVAAPTAGGGSAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 149
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D2FE95|A0A5D2FE95_GOSDA (Uncharacterized protein (Fragment) OS=Gossypium darwinii OX=34276 GN=ES288_A08G009100v1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.414e-34 Identity = 96/140 (68.57%), Postives = 109/140 (77.86%), Query Frame = 0
Query: 78 TLNRVLIPLPST-----------SKMKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
T N L+P P KMKV+AAYLLAVLGGNA+PSA D+K IL SVG EA+D IELL++EVKGKD ELIASGREKLASVPS GGGAVA++A + GG +AAAPAAEAK+E+KVEEKEESDDDMGFSLFD
Sbjct: 12 TANPSLLPFPPRLHFHSRSRDIKVKMKVVAAYLLAVLGGNASPSADDLKVILGSVGAEADDDRIELLLSEVKGKDITELIASGREKLASVPS--GGGAVAVAAPTAGGGSAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 149
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|O24415|RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.187e-29 Identity = 74/115 (64.35%), Postives = 92/115 (80.00%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKVIAAYLLAVLGGN +P+A D+K IL SVG EA++ +E L+TE+K KD E+IA+GRE+L+SVPS GGGA+ + A + AAPA EAK+E+KVEEKEESD+DMGFSLFD
Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPS--GGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P51407|RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.528e-27 Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AA+LLAVL G A+P+ DIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG APAAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LXM8|RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 7.999e-27 Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV AA+LLAVLGGNA PSA +IK I+ +VG + + +IELL+ EV GKD AELIASGREKLASVPSGGG VA+SAA A A K+E K EEKEESDDDMGFSLF+
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG---VAVSAAP-SSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P41099|RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.822e-25 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPS 158
MKVIAA+LLA+LGGN +P+ D+K ILASVG +A+D IELL+++VKGKD ELIASGRE+LASVPS
Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERLASVPS 67
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q96UQ7|RLA2_RHOGU (60S acidic ribosomal protein P2 OS=Rhodotorula glutinis OX=5535 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.469e-23 Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK +AAYLL V GN +PSA D+KK+LA+ I+A++ + +LI E++GKD E+IA G +KLASVPS A AA+ GGAAA A E E+K E+ EESDDDMGF LFD
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPS-----GGAAPAAAAGGAAAGGAAEEKAEDKPAEKDEESDDDMGFGLFD 110
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P46252|RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-23 Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MK +AAYLLAVL GNA+PSA D+ IL SVG E ++ +ELL++++ GKD ELIA+GREK ASVP GG AA+ A AAPAAEAK+E+KVEEKEESDDDMGFSLFD
Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPC---GGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LH85|RLA23_ARATH (60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana OX=3702 GN=RPP2C PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.173e-23 Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEE-KEESDDDMG-FSLFD 206
MKVIAA+LLA LGGN P++ D+KKIL SVG E +++ I+LL + +K D ELIA+GREK++++ SGG A+ GG A+AA P AE+K KKVEE K+ES DD G LFD
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKMSALSSGGPAVAMVAGGGGGGAASAAEPVAESK--KKVEEVKDESSDDAGMMGLFD 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|O01725|RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae OX=7739 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.626e-22 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPS 158
M+ +AAYLLAVLGGNA PSA DIKKIL SVGI+AED + +I E+KGKD E++A+GR KL+S+PS
Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPS 67
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SLF7|RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.456e-22 Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AAYLLAVL G A+P++ADIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG A AAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Match: sp|P08094|RLA2_SCHPO (60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpp201 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.535e-20 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGG 160
MK +AAYLL +GG +PSA+DI+ +L++VGIEAE IE LI E+ GKD ELIA+G EKLA+VP+GG
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKLATVPTGG 69
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27710.4 (| 60S acidic ribosomal protein family | Chr2:11816929-11817670 FORWARD LENGTH=98 | 201606) HSP 1 Score: 108.997 bits (271), Expect = 8.434e-31 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGG 161
MKV+AAYLLAVL G A+P++ADIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGG
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGG 70
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27720.1 (| 60S acidic ribosomal protein family | Chr2:11818696-11819370 FORWARD LENGTH=115 | 201606) HSP 1 Score: 103.99 bits (258), Expect = 1.564e-28 Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AA+LLAVL G A+P+ DIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG APAAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT3G44590.2 (| 60S acidic ribosomal protein family | Chr3:16163983-16164658 FORWARD LENGTH=111 | 201606) HSP 1 Score: 101.679 bits (252), Expect = 8.184e-28 Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV AA+LLAVLGGNA PSA +IK I+ +VG + + +IELL+ EV GKD AELIASGREKLASVPSGGG VA+SAA A A K+E K EEKEESDDDMGFSLF+
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG---VAVSAAP-SSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT3G44590.1 (| 60S acidic ribosomal protein family | Chr3:16163983-16164658 FORWARD LENGTH=111 | 201606) HSP 1 Score: 101.679 bits (252), Expect = 8.184e-28 Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV AA+LLAVLGGNA PSA +IK I+ +VG + + +IELL+ EV GKD AELIASGREKLASVPSGGG VA+SAA A A K+E K EEKEESDDDMGFSLF+
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGG---VAVSAAP-SSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27720.3 (| 60S acidic ribosomal protein family | Chr2:11818696-11819370 FORWARD LENGTH=127 | 201606) HSP 1 Score: 95.1301 bits (235), Expect = 4.921e-25 Identity = 84/127 (66.14%), Postives = 94/127 (74.02%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILAS------------VGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AA+LLAVL G A+P+ DIK IL S VG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG APAAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 127
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT3G28500.1 (| 60S acidic ribosomal protein family | Chr3:10682204-10682551 FORWARD LENGTH=115 | 201606) HSP 1 Score: 92.4337 bits (228), Expect = 4.269e-24 Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEE-KEESDDDMG-FSLFD 206
MKVIAA+LLA LGGN P++ D+KKIL SVG E +++ I+LL + +K D ELIA+GREK++++ SGG A+ GG A+AA P AE+K KKVEE K+ES DD G LFD
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKMSALSSGGPAVAMVAGGGGGGAASAAEPVAESK--KKVEEVKDESSDDAGMMGLFD 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27720.2 (| 60S acidic ribosomal protein family | Chr2:11818696-11819370 FORWARD LENGTH=130 | 201606) HSP 1 Score: 92.0485 bits (227), Expect = 9.976e-24 Identity = 83/130 (63.85%), Postives = 93/130 (71.54%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILAS---------------VGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AA+LLAVL G A+P+ DIK IL S G E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG APAAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIGDCFGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 130
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27710.3 (| 60S acidic ribosomal protein family | Chr2:11816929-11817670 FORWARD LENGTH=115 | 201606) HSP 1 Score: 88.9669 bits (219), Expect = 9.674e-23 Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AAYLLAVL G A+P++ADIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG A AAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27710.2 (| 60S acidic ribosomal protein family | Chr2:11816929-11817670 FORWARD LENGTH=115 | 201606) HSP 1 Score: 88.9669 bits (219), Expect = 9.674e-23 Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AAYLLAVL G A+P++ADIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG A AAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Match: AT2G27710.1 (| 60S acidic ribosomal protein family | Chr2:11816929-11817670 FORWARD LENGTH=115 | 201606) HSP 1 Score: 88.9669 bits (219), Expect = 9.674e-23 Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
Query: 92 MKVIAAYLLAVLGGNAAPSAADIKKILASVGIEAEDSNIELLITEVKGKDFAELIASGREKLASVPSGGGGGAVALSAASGGGAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 206
MKV+AAYLLAVL G A+P++ADIK IL SVG E EDS IELL+ EVKGKD AELIA+GREKLASVPSGGGGG SA SGGG A AAE+K+E+K EEKEESDDDMGFSLF+
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g064000.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g064000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g064000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g064000.1; organism=Vicia faba; type=mRNA; length=621bpback to top protein sequence of Vfaba.Hedin2.R1.1g064000.1_vfh_v1 >Vfaba.Hedin2.R1.1g064000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g064000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g064000.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=206bpback to top mRNA from alignment at chr1S:412796889..412798321+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g064000.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g064000.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g064000.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:412796889..412798321+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|