Vfaba.Hedin2.R1.1g070400.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4P2W9|A0A6A4P2W9_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00028728 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.503e-82 Identity = 126/133 (94.74%), Postives = 128/133 (96.24%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKG-GVDDE 132
MAGRGKTLGSS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKG DDE
Sbjct: 1 MAGRGKTLGSSNAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGVAADDE 133
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PCG2|A0A6A4PCG2_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00045694 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 2.021e-82 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK-GGVDDE 132
MAGRGKTLGSST KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK DDE
Sbjct: 1 MAGRGKTLGSSTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGTSKAAAADDE 133
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P2JBI5|A0A2P2JBI5_RHIMU (Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.331e-82 Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK DDE
Sbjct: 1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGSSKASADDE 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P2Q624|A0A2P2Q624_RHIMU (Histone H2A OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.601e-82 Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK DDE
Sbjct: 1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGSSKSAADDE 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5N6V4|A0A6A5N6V4_LUPAL (Histone H2A OS=Lupinus albus OX=3870 GN=Lal_00003213 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.689e-82 Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS+ KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK DD+
Sbjct: 1 MAGRGKTLGSTAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGTSKAAADDD 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NSE8|A0A2K3NSE8_TRIPR (Histone H2A OS=Trifolium pratense OX=57577 GN=L195_g002426 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 6.612e-82 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG-SSKGGVDDE 132
MAGRGK +GSS PKK+TSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SSK +DE
Sbjct: 1 MAGRGKNIGSSAPKKATSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSSKAAAEDE 133
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N6MWY9|A0A5N6MWY9_9ASTR (Histone H2A OS=Mikania micrantha OX=192012 GN=E3N88_27499 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 9.811e-82 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS+ KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK GSSK DDE
Sbjct: 1 MAGRGKTLGSAAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKVGSSKPASDDE 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HH28|A0A1J7HH28_LUPAN (Histone H2A OS=Lupinus angustifolius OX=3871 GN=TanjilG_06301 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 9.815e-82 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV-DDE 132
MAGRGKTLGSST KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK DDE
Sbjct: 1 MAGRGKTLGSSTAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSKTATADDE 133
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7C8YBW5|A0A7C8YBW5_OPUST (Histone H2A OS=Opuntia streptacantha OX=393608 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 9.919e-82 Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SKGG DDE
Sbjct: 1 MAGRGKTLGSGASKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGGSKGG-DDE 131
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M3B6|A0A2Z6M3B6_TRISU (Histone H2A OS=Trifolium subterraneum OX=3900 GN=TSUD_101900 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.003e-81 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG-SSKGGVDDE 132
MAGRGK +GSS PKK+TSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG SSK +DE
Sbjct: 1 MAGRGKNIGSSAPKKATSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSSKNAAEDE 133
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|O81826|H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana OX=3702 GN=At4g27230 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 2.237e-82 Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
MAGRGK LGS KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK +D
Sbjct: 1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LD28|H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana OX=3702 GN=RAT5 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 1.647e-81 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
MAGRGKTLGS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK
Sbjct: 1 MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C681|H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana OX=3702 GN=At1g51060 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.053e-81 Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS + KK+T+RS+KAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK +D+
Sbjct: 1 MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LHQ5|H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana OX=3702 GN=At3g20670 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.494e-81 Identity = 119/132 (90.15%), Postives = 124/132 (93.94%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS KKSTSRS+KAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPKKAG+SK D++
Sbjct: 1 MAGRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q43312|H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum OX=4565 GN=H2A-4 PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.082e-77 Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGK +GS KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLPKKAG SK D+
Sbjct: 1 MAGRGKAIGSGAAKKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSKAVAADD 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q84NJ4|H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0427700 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.380e-75 Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
MAGRGK +GSS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLP
Sbjct: 1 MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 119
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2YVE5|H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028288 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.380e-75 Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
MAGRGK +GSS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIANGGVMPNIHNLLLP
Sbjct: 1 MAGRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 119
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6ZL42|H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0545400 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.790e-73 Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
MAGRGK +GS KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLP
Sbjct: 1 MAGRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 119
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2YMC6|H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_025469 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.790e-73 Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
MAGRGK +GS KK+ SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA+GGVMPNIHNLLLP
Sbjct: 1 MAGRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 119
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35063|H2AX_PICAB (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 5.220e-70 Identity = 107/127 (84.25%), Postives = 112/127 (88.19%), Query Frame = 0 Query: 3 GRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
GRGK + KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH +LLPKK+G KG +
Sbjct: 9 GRGK----AKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKDKGEI 131
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT4G27230.2 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 240.35 bits (612), Expect = 2.288e-83 Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
MAGRGK LGS KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK +D
Sbjct: 1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT4G27230.1 (| histone H2A 2 | Chr4:13637515-13638325 REVERSE LENGTH=131 | 201606) HSP 1 Score: 240.35 bits (612), Expect = 2.288e-83 Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDD 131
MAGRGK LGS KKSTSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK +D
Sbjct: 1 MAGRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED 131
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G54640.1 (| Histone superfamily protein | Chr5:22196540-22197279 FORWARD LENGTH=130 | 201606) HSP 1 Score: 238.424 bits (607), Expect = 1.685e-82 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
MAGRGKTLGS KK+TSRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAG+SK
Sbjct: 1 MAGRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G51060.1 (| histone H2A 10 | Chr1:18926948-18927443 FORWARD LENGTH=132 | 201606) HSP 1 Score: 238.039 bits (606), Expect = 2.100e-82 Identity = 118/132 (89.39%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS + KK+T+RS+KAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK G+SK +D+
Sbjct: 1 MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT3G20670.1 (| histone H2A 13 | Chr3:7229472-7229963 FORWARD LENGTH=132 | 201606) HSP 1 Score: 236.884 bits (603), Expect = 7.667e-82 Identity = 119/132 (90.15%), Postives = 124/132 (93.94%), Query Frame = 0 Query: 1 MAGRGKTLGSSTPKKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGVDDE 132
MAGRGKTLGS KKSTSRS+KAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLPKKAG+SK D++
Sbjct: 1 MAGRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G54690.1 (| gamma histone variant H2AX | Chr1:20414607-20415206 REVERSE LENGTH=142 | 201606) HSP 1 Score: 208.764 bits (530), Expect = 1.042e-70 Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 0 Query: 2 AGRGKTLGS-STPK--KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
AG G T G PK KS SRS+KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLP K G +KG +
Sbjct: 5 AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDI 135
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT1G08880.1 (| Histone superfamily protein | Chr1:2847144-2847676 REVERSE LENGTH=142 | 201606) HSP 1 Score: 207.608 bits (527), Expect = 3.154e-70 Identity = 108/131 (82.44%), Postives = 114/131 (87.02%), Query Frame = 0 Query: 2 AGRGKTLGS-STPK--KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKGGV 129
AG G T G PK KS SRS+KAGLQFPVGRIARFLK+GKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLP K G +KG +
Sbjct: 5 AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDI 135
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G59870.1 (| histone H2A 6 | Chr5:24115605-24116144 REVERSE LENGTH=150 | 201606) HSP 1 Score: 177.948 bits (450), Expect = 2.795e-58 Identity = 84/110 (76.36%), Postives = 100/110 (90.91%), Query Frame = 0 Query: 15 KSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGS 124
KS S+S KAGLQFPVGRI RFLK G+YA+R+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+RI+PRH+ LA+RNDEEL KLL VTIA+GGV+PNI+++LLPKK+ +
Sbjct: 23 KSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSAT 132
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G02560.1 (| histone H2A 12 | Chr5:575437-576456 FORWARD LENGTH=153 | 201606) HSP 1 Score: 173.326 bits (438), Expect = 1.992e-56 Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = 0 Query: 14 KKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
KK SRS K+GLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI+PRH+ LAVRNDEEL LL VTIA+GGV+PNI+ +LLPKK+
Sbjct: 22 KKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKS 130
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Match: AT5G27670.1 (| histone H2A 7 | Chr5:9792807-9793365 REVERSE LENGTH=150 | 201606) HSP 1 Score: 172.555 bits (436), Expect = 3.236e-56 Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 0 Query: 14 KKSTSRSNKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSS 125
KKS S+S KAGLQFPVGRIAR+LK G+YA R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI PRH+ LA+RNDEEL +LL VTIA+GGV+PNI+ +LLPKK+ +S
Sbjct: 23 KKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTAS 134 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.1g070400.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1; organism=Vicia faba; type=mRNA; length=399bpback to top protein sequence of Vfaba.Hedin2.R1.1g070400.1_vfh_v1 >Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=132bpback to top mRNA from alignment at chr1S:458714179..458714796- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g070400.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g070400.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g070400.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:458714179..458714796- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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