Vfaba.Hedin2.R1.1g477720.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VDV3|A0A072VDV3_MEDTR (DNA-binding bromodomain protein OS=Medicago truncatula OX=3880 GN=25490319 PE=4 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 2.508e-73 Identity = 136/211 (64.45%), Postives = 150/211 (71.09%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNL----------------------SGSETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRF SPSR FS AN S QS D+++NRE YQNEMNP SS+SG NESMIHG IQQEPM SDDFGSN RLGSNFSPQM MV LAD+TGSS A N PQM MDT ++LS APTN+NPTALKAQFFN SSQSDS+NL G E TK Q+S S A+DLN +I AT+S SSN+ETGPQLQPNLALQL
Sbjct: 290 DY--RSRFPSPSRTFSHANTSGLQSGDVLINREPSYQNEMNPGSSVSGGNESMIHGRIQQEPMAHSDDFGSNRRLGSNFSPQMTMVSLADLTGSSNAGNVPQMFGMDTTNSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLLALESGFDPQRFSQGLTGKSSWQGLEVPTK-QNSVSLATDLNGIIGATSSRSSNVETGPQLQPNLALQL 497
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V2U0|A0A072V2U0_MEDTR (DNA-binding bromodomain protein OS=Medicago truncatula OX=3880 GN=25490319 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 9.449e-73 Identity = 136/211 (64.45%), Postives = 150/211 (71.09%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNL----------------------SGSETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRF SPSR FS AN S QS D+++NRE YQNEMNP SS+SG NESMIHG IQQEPM SDDFGSN RLGSNFSPQM MV LAD+TGSS A N PQM MDT ++LS APTN+NPTALKAQFFN SSQSDS+NL G E TK Q+S S A+DLN +I AT+S SSN+ETGPQLQPNLALQL
Sbjct: 339 DY--RSRFPSPSRTFSHANTSGLQSGDVLINREPSYQNEMNPGSSVSGGNESMIHGRIQQEPMAHSDDFGSNRRLGSNFSPQMTMVSLADLTGSSNAGNVPQMFGMDTTNSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLLALESGFDPQRFSQGLTGKSSWQGLEVPTK-QNSVSLATDLNGIIGATSSRSSNVETGPQLQPNLALQL 546
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V4R1|A0A072V4R1_MEDTR (DNA-binding bromodomain protein OS=Medicago truncatula OX=3880 GN=25490319 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.047e-71 Identity = 136/211 (64.45%), Postives = 150/211 (71.09%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNL----------------------SGSETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRF SPSR FS AN S QS D+++NRE YQNEMNP SS+SG NESMIHG IQQEPM SDDFGSN RLGSNFSPQM MV LAD+TGSS A N PQM MDT ++LS APTN+NPTALKAQFFN SSQSDS+NL G E TK Q+S S A+DLN +I AT+S SSN+ETGPQLQPNLALQL
Sbjct: 453 DY--RSRFPSPSRTFSHANTSGLQSGDVLINREPSYQNEMNPGSSVSGGNESMIHGRIQQEPMAHSDDFGSNRRLGSNFSPQMTMVSLADLTGSSNAGNVPQMFGMDTTNSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLLALESGFDPQRFSQGLTGKSSWQGLEVPTK-QNSVSLATDLNGIIGATSSRSSNVETGPQLQPNLALQL 660
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NEV8|A0A2Z6NEV8_TRISU (Bromo domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_311200 PE=4 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 1.407e-71 Identity = 137/211 (64.93%), Postives = 152/211 (72.04%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSS----------------QSDSNNLSGS------ETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRFSSPSR FSLAN S QS D V+NR+ YQNEMN SS+SG NESMIHG IQQEPM SDDFGSNGRL SNFSPQM MVRLADITGSS A NAPQM+DMD++++LS Q APTN+NPT LKAQFFN SS Q S L+G E TK Q+SFS +DLN ++ ATNS SSN+ETGPQLQPNLALQL
Sbjct: 391 DY--RSRFSSPSRTFSLANTSCLQSGDTVINRDQSYQNEMNSGSSVSGGNESMIHGRIQQEPMAHSDDFGSNGRLRSNFSPQMTMVRLADITGSSNAGNAPQMVDMDSVNSLSGQIAPTNINPTGLKAQFFNKSSQSDSSNLSAPESGFDPQRFSQGLAGKSSWQGLEVPTK-QNSFSPGNDLNALMGATNSHSSNVETGPQLQPNLALQL 598
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y829|A0A1S2Y829_CICAR (uncharacterized protein LOC101510814 OS=Cicer arietinum OX=3827 GN=LOC101510814 PE=4 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 7.366e-69 Identity = 135/212 (63.68%), Postives = 149/212 (70.28%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNN------------SSQSDSNNLS-----------GSETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DYK SRFSSPSRMFSLAN S QS DMV+NRE YQNE+N +S+SG NESMI G IQQEPM SDDFGSNGR +NFSP+MKMVRLAD+TGSS A N PQM DMDTI++LS APTN+NPTALKAQFFN S D LS G E TK Q+SFS +DLN MI AT+S SSN+ETGPQLQPNLALQL
Sbjct: 461 DYK--SRFSSPSRMFSLANTSRSQSGDMVINRELSYQNELNQGNSVSGGNESMIPGRIQQEPMAHSDDFGSNGRFSANFSPEMKMVRLADLTGSSNAGNVPQMFDMDTINSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLSGLESGFDLQRLSQGLAPGKSSWQGLEVPTK-QNSFSLGNDLNGMIGATSSRSSNVETGPQLQPNLALQL 669
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PI77|A0A2K3PI77_TRIPR (DNA-binding bromodomain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g011653 PE=4 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.483e-68 Identity = 136/212 (64.15%), Postives = 151/212 (71.23%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSS----------------QSDSNNLSGS------ETHTKPQSSFSHASDLNRMI-EATNSWSSNIETGPQLQPNLALQL 300
DY RSRF SPSR FSLAN S QS D V+NR+ YQNEMNP SS+SG NESMIHG IQQEP SDDFGS+GRL SNFSPQM MVRL+DITGSS A NAPQM+DMDTI++LSSQ APTN+NP LKAQFFN SS Q S L+G E TK Q+SFS +DLN ++ ATNS SSN+ETGPQLQPNLALQL
Sbjct: 445 DY--RSRFPSPSRTFSLANTSCLQSGDTVINRDPSYQNEMNPGSSVSGGNESMIHGRIQQEPAAHSDDFGSSGRLRSNFSPQMTMVRLSDITGSSNAGNAPQMVDMDTINSLSSQIAPTNINPAGLKAQFFNKSSHSDSSNLSAPESGFDPQRFSQGLAGKSSWQGLEVPTK-QNSFSPGNDLNALMGAATNSHSSNVETGPQLQPNLALQL 653
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392MMI0|A0A392MMI0_9FABA (DNA-binding bromodomain protein OS=Trifolium medium OX=97028 GN=A2U01_0009623 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 8.365e-56 Identity = 108/172 (62.79%), Postives = 124/172 (72.09%), Query Frame = 0
Query: 151 MNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSS----------------QSDSNNLSGS------ETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
MNP SS+SG NESMIHG IQQEP+ SDDF S+GRL SNFSPQM MVRL+D+TGSS A NAPQM+DMDTI++LSSQ APTN+NPT LKAQFFN SS Q S L+G E TK Q+SFS +DLN ++ AT+S SSN+ETGPQLQPNLALQL
Sbjct: 1 MNPGSSVSGGNESMIHGRIQQEPVAHSDDFDSSGRLRSNFSPQMTMVRLSDLTGSSNAGNAPQMVDMDTINSLSSQIAPTNINPTGLKAQFFNKSSQSDSSNLSAPESGFDPQRFSQGLAGKSSWQGLEVPTK-QNSFSPGNDLNGLMGATHSHSSNVETGPQLQPNLALQL 171
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HPQ2|A0A1J7HPQ2_LUPAN (Bromo domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_05405 PE=4 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 4.409e-49 Identity = 117/210 (55.71%), Postives = 134/210 (63.81%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNL----SGSETHT-------KP----------QSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DYK S F SPS + N QS DMVMNREF YQN+ NP ++ G ESM+ +QQE MV+SDDFGSN R GSNFSPQMKMVRLAD+TGS+ + N PQMLDMD+I SS AP N+N L+ QF NN SQ S NL SG E+ + KP QSSF A+DLNR I ATNS SSN+E G Q QPNLALQL
Sbjct: 445 DYK--SSFLSPSGSLPVENRPFLQSGDMVMNREFNYQNDSNPVNNAGGGIESMVPLRMQQESMVRSDDFGSNCRPGSNFSPQMKMVRLADLTGSTSSGNVPQMLDMDSI---SSHMAPANIN-QPLRGQFLNNPSQLHSINLLPPESGFESQSLSQGLAGKPSWQGMEVPTNQSSFPLANDLNRKIVATNSGSSNVENGSQRQPNLALQL 648
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371E0G9|A0A371E0G9_MUCPR (Bromodomain and PHD finger-containing protein 3 OS=Mucuna pruriens OX=157652 GN=BRPF3 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.728e-48 Identity = 112/210 (53.33%), Postives = 130/210 (61.90%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNLSGSETHTKP---------------------QSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRFSSPS F LAN S QS DMVMNRE YQNE+NP SI G +ES+ IQQE M SDD G R GSN+S QMKMVRLAD+TGS A APQM DMD I SS+ A +N+NP+ K Q+ + SSQ DS NL E+ +P Q+SF+ A+DL+ I ATNS SN+E G QLQPNLALQL
Sbjct: 456 DY--RSRFSSPSGSFPLANRSCLQSGDMVMNRELNYQNELNPVISIGGGSESITPVRIQQEAMAHSDDLGLQDRSGSNYSSQMKMVRLADLTGSPSAGVAPQMFDMDPI---SSRIAHSNINPSH-KGQYLSKSSQFDSGNLLARESGLEPLSWSQGLAGKSSWQGLEVPTKQNSFALANDLHGKIGATNSPGSNVEAGSQLQPNLALQL 659
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Match: tr|I1K7C4|I1K7C4_SOYBN (Bromo domain-containing protein OS=Glycine max OX=3847 GN=100783010 PE=4 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 8.170e-46 Identity = 113/211 (53.55%), Postives = 132/211 (62.56%), Query Frame = 0
Query: 112 DYKARSRFSSPSRMFSLANASPFQSRDMVMNREFGYQNEMNPSSSISGRNESMIHGMIQQEPMVQSDDFGSNGRLGSNFSPQMKMVRLADITGSSKASNAPQMLDMDTIHNLSSQTAPTNVNPTALKAQFFNNSSQSDSNNL----------------------SGSETHTKPQSSFSHASDLNRMIEATNSWSSNIETGPQLQPNLALQL 300
DY RSRFSSPS F LAN S QS DM +N YQN++NP +I G +ES+ IQQE MV SDDFGS+ RLGSNF QMKMVRLAD+TGSS A APQM DMD +S+ A TNV P+ LK Q+ + SSQ DS NL GSE TK Q+SF+ A+D+N I TNS +SN+E G QLQPNLALQL
Sbjct: 286 DY--RSRFSSPSGSFPLANRSGLQSGDMAINN---YQNDLNPVINIPGGSESITPMRIQQESMVHSDDFGSHDRLGSNFPSQMKMVRLADLTGSSSAGVAPQMFDMDPP--ISNHIAHTNVCPS-LKGQYLSKSSQLDSGNLLAREPGFEQRSWSQGLAGKSSWQGSEVPTK-QNSFALANDINGEIGTTNSSNSNVEAGSQLQPNLALQL 487
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4JRP8|STIL2_ARATH (Protein STICHEL-like 2 OS=Arabidopsis thaliana OX=3702 GN=At4g24790 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.766e-21 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4JRP0|STIL3_ARATH (Protein STICHEL-like 3 OS=Arabidopsis thaliana OX=3702 GN=At4g18820 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.077e-18 Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDY 113
DAE+ L+QLSLLG++I++ LV EL G+V D++L DLLDLALS DT+NTV +M + ++P+ L+ QL +I D+L G D+
Sbjct: 643 DAEMTLEQLSLLGQRISVPLVQELVGLVSDEKLVDLLDLALSADTVNTVKNLRTIMETSVEPLALMSQLATVITDILAGSYDF 725
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4KEM0|STIL4_ARATH (Protein STICHEL-like 4 OS=Arabidopsis thaliana OX=3702 GN=At5g45720 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.027e-17 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDY 113
DAE+ L+QLSLLG +I++ LV E+ G++ D++L DLLDLALS DT+NTV +M + ++P+ L+ QL +I D+L G D+
Sbjct: 552 DAEMTLEQLSLLGTRISVPLVQEMVGLISDEKLVDLLDLALSADTVNTVKNLRIIMETGLEPLALMSQLATVITDILAGSYDF 634
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4HW65|STIL1_ARATH (Protein STICHEL-like 1 OS=Arabidopsis thaliana OX=3702 GN=At1g14460 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.847e-12 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDYKA 115
DAE +L+QLSL+GK+I + LV EL G+V DD+L +LL+LALS DT TV +A +L+ DP+ ++ QL ++IMD++ G YKA
Sbjct: 637 DAETMLEQLSLMGKRITVDLVNELVGVVSDDKLLELLELALSSDTAETVKKARELLDLGADPILMMSQLASLIMDIIAGA--YKA 719
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Match: sp|O64728|STI_ARATH (Protein STICHEL OS=Arabidopsis thaliana OX=3702 GN=STI PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.397e-11 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAE +L+QLSLLGK+I +LV EL G+V D++L +LL+LALS DT TV RA +L+ DP+ L+ QL ++IMD++ G
Sbjct: 663 DAETMLEQLSLLGKRITTALVNELVGVVSDEKLLELLELALSSDTAETVKRARELLDLGADPIVLMSQLASLIMDIIAG 741
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G24790.5 (| AAA-type ATPase family protein | Chr4:12778222-12781345 FORWARD LENGTH=857 | 201606) HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-22 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G24790.2 (| AAA-type ATPase family protein | Chr4:12778222-12781345 FORWARD LENGTH=857 | 201606) HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-22 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G24790.1 (| AAA-type ATPase family protein | Chr4:12778222-12781345 FORWARD LENGTH=857 | 201606) HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-22 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G24790.4 (| AAA-type ATPase family protein | Chr4:12778222-12781031 FORWARD LENGTH=815 | 201606) HSP 1 Score: 95.9005 bits (237), Expect = 8.030e-22 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G24790.3 (| AAA-type ATPase family protein | Chr4:12778222-12781031 FORWARD LENGTH=815 | 201606) HSP 1 Score: 95.9005 bits (237), Expect = 8.030e-22 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAEI+LDQLSLLGK+I SL Y+L G+V DDEL DLLDLA+S DT NTVIRA +LMRS++DPMQL+ QL N+IMD++ G
Sbjct: 452 DAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDLAMSSDTSNTVIRARELMRSKIDPMQLISQLANVIMDIIAG 530
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT4G18820.1 (| AAA-type ATPase family protein | Chr4:10330371-10334090 FORWARD LENGTH=1097 | 201606) HSP 1 Score: 88.1965 bits (217), Expect = 4.171e-19 Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDY 113
DAE+ L+QLSLLG++I++ LV EL G+V D++L DLLDLALS DT+NTV +M + ++P+ L+ QL +I D+L G D+
Sbjct: 643 DAEMTLEQLSLLGQRISVPLVQELVGLVSDEKLVDLLDLALSADTVNTVKNLRTIMETSVEPLALMSQLATVITDILAGSYDF 725
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT5G45720.1 (| AAA-type ATPase family protein | Chr5:18543338-18546629 REVERSE LENGTH=966 | 201606) HSP 1 Score: 84.3445 bits (207), Expect = 8.213e-18 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDY 113
DAE+ L+QLSLLG +I++ LV E+ G++ D++L DLLDLALS DT+NTV +M + ++P+ L+ QL +I D+L G D+
Sbjct: 552 DAEMTLEQLSLLGTRISVPLVQEMVGLISDEKLVDLLDLALSADTVNTVKNLRIIMETGLEPLALMSQLATVITDILAGSYDF 634
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT5G45720.2 (| AAA-type ATPase family protein | Chr5:18543338-18546629 REVERSE LENGTH=956 | 201606) HSP 1 Score: 84.3445 bits (207), Expect = 8.500e-18 Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDY 113
DAE+ L+QLSLLG +I++ LV E+ G++ D++L DLLDLALS DT+NTV +M + ++P+ L+ QL +I D+L G D+
Sbjct: 552 DAEMTLEQLSLLGTRISVPLVQEMVGLISDEKLVDLLDLALSADTVNTVKNLRIIMETGLEPLALMSQLATVITDILAGSYDF 634
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT1G14460.1 (| AAA-type ATPase family protein | Chr1:4948962-4952750 REVERSE LENGTH=1116 | 201606) HSP 1 Score: 69.3218 bits (168), Expect = 8.028e-13 Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVGKCDYKA 115
DAE +L+QLSL+GK+I + LV EL G+V DD+L +LL+LALS DT TV +A +L+ DP+ ++ QL ++IMD++ G YKA
Sbjct: 637 DAETMLEQLSLMGKRITVDLVNELVGVVSDDKLLELLELALSSDTAETVKKARELLDLGADPILMMSQLASLIMDIIAGA--YKA 719
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Match: AT2G02480.2 (| AAA-type ATPase family protein | Chr2:661093-665337 FORWARD LENGTH=1218 | 201606) HSP 1 Score: 67.781 bits (164), Expect = 2.452e-12 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 31 DAEILLDQLSLLGKKINISLVYELTGIVLDDELFDLLDLALSPDTINTVIRALKLMRSRMDPMQLVFQLENIIMDVLVG 109
DAE +L+QLSLLGK+I +LV EL G+V D++L +LL+LALS DT TV RA +L+ DP+ L+ QL ++IMD++ G
Sbjct: 663 DAETMLEQLSLLGKRITTALVNELVGVVSDEKLLELLELALSSDTAETVKRARELLDLGADPIVLMSQLASLIMDIIAG 741 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 5
BLAST of Vfaba.Hedin2.R1.1g477720.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.1g477720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g477720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g477720.1; organism=Vicia faba; type=mRNA; length=903bpback to top protein sequence of Vfaba.Hedin2.R1.1g477720.1_vfh_v1 >Vfaba.Hedin2.R1.1g477720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g477720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g477720.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=300bpback to top mRNA from alignment at chr1L:1731540678..1731541720+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.1g477720.1_vfh_v1 ID=Vfaba.Hedin2.R1.1g477720.1_vfh_v1; Name=Vfaba.Hedin2.R1.1g477720.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1L:1731540678..1731541720+ (Vicia fababack to top |