Vfaba.Hedin2.R1.2g122760.1

Transcript Overview
NameVfaba.Hedin2.R1.2g122760.1
Unique NameVfaba.Hedin2.R1.2g122760.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length951
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:718433479..718437425 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR231Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL592Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL782Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL280Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL379Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0731Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL334Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL524Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL798Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL468Pisum sativum Cameor genome v1aPisum sativum
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR284Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR311Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL497Cicer arietinum ICC 4958 genome v2Cicer arietinum
vfhvrvR275Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR291Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR227Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR271Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL230Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL334Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL799Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL234Cicer arietinum
carvfhL328Cicer arietinum
ccavfhL315Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL493Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR275Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR315Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR258Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL236Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL338Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR248Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR289Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL022Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL782Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR266Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cr_13970.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va04G054010.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g084760.1Pisum sativum Cameor genome v1aPisum sativum
Ca_03886Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun09g161300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
LR48_mrnaVigan04g172400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g161300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.02G141100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.02G105600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_02G01156.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0257500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_027335105.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_13934.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_06477.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058925527.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr09.887Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014643320.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_009204Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.009G129900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg53893.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr09.2066Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.2g100400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g122760Vfaba.Hedin2.R1.2g122760_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718433479..718433928Vicia fabaexon
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718434013..718434081Vicia fabaexon
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718434714..718434818Vicia fabaexon
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718435326..718435445Vicia fabaexon
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718437144..718437233Vicia fabaexon
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-exonVfaba.Hedin2.R1.2g122760.1_vfh_v1-exon-chr2_vfh_v1:718437309..718437425Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718433479..718433928Vicia fabaCDS
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718434013..718434081Vicia fabaCDS
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718434714..718434818Vicia fabaCDS
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718435326..718435445Vicia fabaCDS
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718437144..718437233Vicia fabaCDS
Vfaba.Hedin2.R1.2g122760.1_vfh_v1-cdsVfaba.Hedin2.R1.2g122760.1_vfh_v1-cds-chr2_vfh_v1:718437309..718437425Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g122760.1_vfh_v1Vfaba.Hedin2.R1.2g122760.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g122760.1_vfh_v1Vfaba.Hedin2.R1.2g122760.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YBV9|A0A1S2YBV9_CICAR (uncharacterized protein LOC101502256 OS=Cicer arietinum OX=3827 GN=LOC101502256 PE=4 SV=1)

HSP 1 Score: 505.753 bits (1301), Expect = 1.485e-178
Identity = 275/319 (86.21%), Postives = 285/319 (89.34%), Query Frame = 0
Query:    9 FFLTSPPLPPLSTFTQPSFFPTSKLKPLS-----LQT----TSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAA--GDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            F   SPP  PLST +Q SFF   KLKPLS     LQT    TSRRNPFLTRAD  + DS+GPDDYE+DD+EM+EVDNKKDFDIEY+ LAA  GD DIAA QS +FVSTQGWDPDTLVDYRI EDEFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYK EREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRA +LVTAPGGRTRDRKSDLLVIADKGNSFKIIH SEKDDPTTVIERREW Q+REEMERHLRKLRDFSTSNWF
Sbjct:   14 FLFPSPP--PLSTNSQLSFFSPFKLKPLSNTSLFLQTPSTSTSRRNPFLTRAD--DGDSAGPDDYEMDDDEMEEVDNKKDFDIEYDPLAAAAGDVDIAAVQSKNFVSTQGWDPDTLVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKSEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAKILVTAPGGRTRDRKSDLLVIADKGNSFKIIHASEKDDPTTVIERREWAQSREEMERHLRKLRDFSTSNWF 328          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V1Z7|A0A072V1Z7_MEDTR (Plastid transcriptionally active protein OS=Medicago truncatula OX=3880 GN=25489706 PE=4 SV=1)

HSP 1 Score: 505.368 bits (1300), Expect = 1.577e-178
Identity = 279/318 (87.74%), Postives = 292/318 (91.82%), Query Frame = 0
Query:    1 MSISTTSFFFLTSPPLPPLSTFTQPSFFPTSKLKPLSLQT--TSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            MSISTTSF FL+ P LPPLS   QPSF  + KLKPL LQT  T+RRNPFLTRAD  +V+S+GPDDYE+D++EM+EVDN+KDFDIEYE  A GD DIA AQS +FVSTQGWDPDTLVDYRI EDEFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYK EREIEK FLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRA VLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREW Q+REEMERHLRKLRDFSTSNWF
Sbjct:    5 MSISTTSFLFLSPPSLPPLSRTPQPSFSSSFKLKPLILQTSPTTRRNPFLTRADDGDVESAGPDDYEMDEDEMEEVDNEKDFDIEYE--ANGDVDIATAQSMNFVSTQGWDPDTLVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKSEREIEKAFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWAQSREEMERHLRKLRDFSTSNWF 320          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2N9IUJ9|A0A2N9IUJ9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55711 PE=4 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 2.140e-159
Identity = 223/278 (80.22%), Postives = 243/278 (87.41%), Query Frame = 0
Query:   43 RRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEK----LAAGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            R+NPFLTR D  + D SGPDDY++D+EE++EVDNKKDFDIEY       AA D DIA  QS SFV TQGWD + +VDYRI E+EFHKI LLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVY+IPKVLAPMPQKYIRCA+SD+GC NVTEPP+DARRDPLYK EREI KVFLTKHY+NRRL DPEFVLDFEEIY IDSKTKSITRA VLVT PGGR RDRKSDLLVI D GNSFKIIH SE+DDPTTVIER +WI+TR++MERHLRKLRDFS SNWF
Sbjct:   51 RKNPFLTRVDDGDADGSGPDDYDMDEEELEEVDNKKDFDIEYHSEPSSRAARDEDIAIVQSNSFVPTQGWDSEMIVDYRINEEEFHKICLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAKSDYGCYNVTEPPIDARRDPLYKTEREILKVFLTKHYRNRRLDDPEFVLDFEEIYAIDSKTKSITRAKVLVTVPGGRNRDRKSDLLVIRDNGNSFKIIHESERDDPTTVIEREDWIKTRQDMERHLRKLRDFSVSNWF 328          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TYG1|A0A1S3TYG1_VIGRR (uncharacterized protein LOC106759929 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759929 PE=4 SV=1)

HSP 1 Score: 451.44 bits (1160), Expect = 4.188e-157
Identity = 239/326 (73.31%), Postives = 273/326 (83.74%), Query Frame = 0
Query:    4 STTSFFFLTSPPLPPLSTFTQPSFFPTSKLKPLS-------LQTTSR--RNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKL----AAGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            S TS FF +SPPL  L+  +  S  P  KLKPLS       L+T SR   NPFLTRA+  + DS+GPD YE++++EM+E+DNKKDFDIEY+ L    AA D DI   +S SFVSTQGW+ +T+VDY+I E+EFHKISL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIP+VLAPMPQKYIRCAQSD+G  NVTEPP+DA RDPLYK EREI KV+LTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRA VLVTAPGGRTRDR+SDLLVI+D+G+SFKIIH SEK+DPTTVIE++EW  +R EMERHL+KLRDFS SNWF
Sbjct:    5 SATSTFFFSSPPLS-LNPHSHRSLLPF-KLKPLSISHSSFLLRTPSRSTHNPFLTRAEDDDGDSAGPDHYEMEEDEMEELDNKKDFDIEYDPLLPVVAAVDEDITIVESGSFVSTQGWNSETVVDYKINEEEFHKISLVDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPRVLAPMPQKYIRCAQSDYGSYNVTEPPIDAPRDPLYKTEREILKVYLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTAPGGRTRDRRSDLLVISDRGSSFKIIHASEKEDPTTVIEKQEWETSRAEMERHLKKLRDFSISNWF 328          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A3D3E1|A0A6A3D3E1_HIBSY (Wound-responsive family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000477pilonHSYRG00543 PE=4 SV=1)

HSP 1 Score: 449.899 bits (1156), Expect = 2.535e-156
Identity = 231/336 (68.75%), Postives = 261/336 (77.68%), Query Frame = 0
Query:    1 MSISTTSFFFLTSPPLPPL---STFTQ----PSFFPTSKLKPLSLQTT---SRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAG----------DGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            M+ ++ + FF  SPPL      S+F      PS  P   L+P  L +    + +  FL R D  + D+ GPDDY++D+EE++E+DNKKDFD+EY+ LAA           D DI   +S SFVSTQGWD D +VDYRI E EFHKISL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRRLGDPEFVLDFEEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D GNSFKIIH SE+DDPTTVIER EW +TR++ME+HLRKLRDFS SNWF
Sbjct:    1 MATASATLFF--SPPLVAAKHSSSFHHFHLNPSLLPFPCLRPKPLHSPLSPTLKPSFLVRVDDGDADAGGPDDYDMDEEEVEELDNKKDFDVEYDPLAATSVGAASSATVDVDIEITESKSFVSTQGWDSDMVVDYRINEKEFHKISLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREIMKVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRNRDRKGDLLVIRDNGNSFKIIHASERDDPTTVIEREEWDKTRQDMEKHLRKLRDFSISNWF 334          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J3G5J4|A0A1J3G5J4_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LC_TR19655_c0_g1_i1_g.65305 PE=4 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 5.652e-156
Identity = 222/314 (70.70%), Postives = 248/314 (78.98%), Query Frame = 0
Query:   17 PPLSTFTQPSFFPT-----SKLKPLSLQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKL---------AAGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            PP S  T    F +         PL+L++  R    + + D V+ D  GPD+Y++DDEE++EVDNKKD+D+EY+ L           GDGDIA  QS SF+STQGWD D +VDYRI EDEFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YSIP+VLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR  DPEFVLD EEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D GNSFKIIH SE+DDPTTVIER EW +TRE+ME+HLRKLRDFS SNWF
Sbjct:   19 PPASCATTQRLFASFRNDGGSFAPLTLKS-RRGRAIIVKVDDVDADGGGPDEYDMDDEEVEEVDNKKDYDVEYDPLAAAMAAASGVGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRSNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGNSFKIIHASERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 331          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J3K1L4|A0A1J3K1L4_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=MP_TR10688_c0_g1_i1_g.32425 PE=4 SV=1)

HSP 1 Score: 448.358 bits (1152), Expect = 7.936e-156
Identity = 222/314 (70.70%), Postives = 248/314 (78.98%), Query Frame = 0
Query:   17 PPLSTFTQPSFFPT-----SKLKPLSLQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKL---------AAGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            PP S  T    F +         PL+L++  R    + + D V+ D  GPD+Y++DDEE++EVDNKKD+D+EY+ L           GDGDIA  QS SF+STQGWD D +VDYRI EDEFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YSIP+VLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR  DPEFVLD EEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D GNSFKIIH SE+DDPTTVIER EW +TRE+ME+HLRKLRDFS SNWF
Sbjct:   19 PPASYATTQRLFASFRNDGGSFAPLTLKS-RRGRAIIVKVDDVDADGGGPDEYDMDDEEVEEVDNKKDYDVEYDPLAAAMAAASGVGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRSNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGNSFKIIHASERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 331          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|E6NU80|E6NU80_JATCU (JMS09K11.8 protein OS=Jatropha curcas OX=180498 GN=JMS09K11.8 PE=4 SV=1)

HSP 1 Score: 447.973 bits (1151), Expect = 1.193e-155
Identity = 226/318 (71.07%), Postives = 254/318 (79.87%), Query Frame = 0
Query:    9 FFLTSPPLPPLSTFTQPSFFPTSKLKPLS---LQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLA-------AGDGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            F   +P L   +T T P F  T K KP+S   L+   + N F+ +AD  + D  GPDDY++D+EE +EVDNKKD+D++Y+  A        GD DIA   S SFVSTQGWD + +VDYRI E+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IPKVLAPMPQKYIRCA SD+G  NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR GDPEFVLDFEEIYVIDSKTKSITRA V+VT PGGR RDRKSDLLVI D GN+FKIIH SEKDDPTTVIER EW +TR+EMERHLRKLRDFS SNWF
Sbjct:   15 FTAKTPTLTANNTITIPLFSSTFKFKPISYNFLKPLKKPNLFILKADEGDGDEVGPDDYDMDEEEAEEVDNKKDYDLDYDPSAVVAAANVGGDEDIAMVISKSFVSTQGWDSEKIVDYRIDEEEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYAIPKVLAPMPQKYIRCAMSDYGRYNVTEPPIDAPRDPLYKSEREILKVFLTKHYRNRRFGDPEFVLDFEEIYVIDSKTKSITRAKVVVTVPGGRNRDRKSDLLVIRDNGNTFKIIHASEKDDPTTVIEREEWAKTRQEMERHLRKLRDFSVSNWF 332          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D2VU32|A0A5D2VU32_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G094700v1 PE=4 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.384e-155
Identity = 233/337 (69.14%), Postives = 264/337 (78.34%), Query Frame = 0
Query:    1 MSISTTSFFFLTSPPLPPLST--FTQPSF--------FPTSKLKPLSLQTTSRRNP-FLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAG----------DGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            M  +TT+  FL+    PPL T  ++  S         FP+ K KPL   +T    P FL R D  + D+ GPDDY++D+EE++E+DNKKDFD+EY+ LAA           D DI   +S SFVSTQGWD D +VDYRI E+EFHKISL+ CDFFIRKPPDPDNDVYDFREMYV+PPDTDVYSIPKVLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK ERE+ KVFLTKHY+NRRLGDPEFVLDFEEIYVIDSKTKSITRA VLVT PGGR RDRK+DLLVI D GNSFKIIH SE+DDPTTVIER EW +TR++MERHLRKLRDFS SNWF
Sbjct:    1 MVTTTTATLFLS----PPLFTAKYSSSSLRINQSLLPFPSLKPKPLHSPSTPTLKPSFLVRVDDGDADAGGPDDYDMDEEEVEELDNKKDFDVEYDPLAAASAATASSATIDVDIQITESKSFVSTQGWDSDMVVDYRINEEEFHKISLMDCDFFIRKPPDPDNDVYDFREMYVSPPDTDVYSIPKVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKTEREVMKVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRNRDRKNDLLVIRDNGNSFKIIHSSERDDPTTVIEREEWDKTRQDMERHLRKLRDFSISNWF 333          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5D2DBU8|A0A5D2DBU8_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D02G096100v1 PE=4 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 2.630e-155
Identity = 233/337 (69.14%), Postives = 264/337 (78.34%), Query Frame = 0
Query:    1 MSISTTSFFFLTSPPLPPLST--FTQPSF--------FPTSKLKPLSLQTTSRRNP-FLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAG----------DGDIAAAQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            M  +TT+  FL+    PPL T  ++  S         FP+ K KPL   +T    P FL R D  + D+ GPDDY++D+EE++E+DNKKDFD+EY+ LAA           D DI   +S SFVSTQGWD D +VDYRI E+EFHKISL+ CDFFIRKPPDPDNDVYDFREMYV+PPDTDVYSIPKVLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK ERE+ KVFLTKHY+NRRLGDPEFVLDFEEIYVIDSKTKSITRA VLVT PGGR RDRK+DLLVI D GNSFKIIH SE+DDPTTVIER EW +TR++MERHLRKLRDFS SNWF
Sbjct:    1 MVTTTTATLFLS----PPLFTAKYSSSSLRINHSLLPFPSLKPKPLHSPSTPTLKPSFLVRVDDGDADAGGPDDYDMDEEEVEELDNKKDFDVEYDPLAAASAATASSATIDVDIQITESKSFVSTQGWDSDMVVDYRINEEEFHKISLMDCDFFIRKPPDPDNDVYDFREMYVSPPDTDVYSIPKVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKTEREVMKVFLTKHYRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRNRDRKNDLLVIRDNGNSFKIIHSSERDDPTTVIEREEWDKTRQDMERHLRKLRDFSISNWF 333          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XI19|PTAC6_ARATH (PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC6 PE=1 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 6.826e-147
Identity = 215/315 (68.25%), Postives = 244/315 (77.46%), Query Frame = 0
Query:   10 FLTSPPLPPLSTFTQPSFFPTSKLKPLSLQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAGDGDIAA--------AQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            F + PP P  S     SF       PL+L++   R   + + D V+ D  G D+Y++DDEE++EVDNKKD+D+EY+ LAA                QS SF+STQGWD D +VDYRI EDEFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YSIP+VLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR  DPEFVLD EEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D G SFKIIH+ E+DDPTTVIER EW +TRE+ME+HLRKLRDFS SNWF
Sbjct:   15 FTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRG-IVVKVDDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. Araport11
Match: AT1G21600.2 (| plastid transcriptionally active 6 | Chr1:7571514-7573782 REVERSE LENGTH=328 | 201606)

HSP 1 Score: 419.083 bits (1076), Expect = 6.984e-148
Identity = 215/315 (68.25%), Postives = 244/315 (77.46%), Query Frame = 0
Query:   10 FLTSPPLPPLSTFTQPSFFPTSKLKPLSLQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAGDGDIAA--------AQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            F + PP P  S     SF       PL+L++   R   + + D V+ D  G D+Y++DDEE++EVDNKKD+D+EY+ LAA                QS SF+STQGWD D +VDYRI EDEFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YSIP+VLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR  DPEFVLD EEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D G SFKIIH+ E+DDPTTVIER EW +TRE+ME+HLRKLRDFS SNWF
Sbjct:   15 FTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRG-IVVKVDDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328          
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. Araport11
Match: AT1G21600.1 (| plastid transcriptionally active 6 | Chr1:7571514-7573782 REVERSE LENGTH=328 | 201606)

HSP 1 Score: 419.083 bits (1076), Expect = 6.984e-148
Identity = 215/315 (68.25%), Postives = 244/315 (77.46%), Query Frame = 0
Query:   10 FLTSPPLPPLSTFTQPSFFPTSKLKPLSLQTTSRRNPFLTRADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAGDGDIAA--------AQSTSFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLYKYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVTAPGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEMERHLRKLRDFSTSNWF 316
            F + PP P  S     SF       PL+L++   R   + + D V+ D  G D+Y++DDEE++EVDNKKD+D+EY+ LAA                QS SF+STQGWD D +VDYRI EDEFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YSIP+VLAPMPQKYIRCA SD+GC NVTEPP+DA RDPLYK EREI KVFLTKHY+NRR  DPEFVLD EEIYVIDSKTKSITRA VLVT PGGR RDRK DLLVI D G SFKIIH+ E+DDPTTVIER EW +TRE+ME+HLRKLRDFS SNWF
Sbjct:   15 FTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRG-IVVKVDDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGGGDGDIAFVQSKSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YBV9|A0A1S2YBV9_CICAR1.485e-17886.21uncharacterized protein LOC101502256 OS=Cicer arie... [more]
tr|A0A072V1Z7|A0A072V1Z7_MEDTR1.577e-17887.74Plastid transcriptionally active protein OS=Medica... [more]
tr|A0A2N9IUJ9|A0A2N9IUJ9_FAGSY2.140e-15980.22Uncharacterized protein OS=Fagus sylvatica OX=2893... [more]
tr|A0A1S3TYG1|A0A1S3TYG1_VIGRR4.188e-15773.31uncharacterized protein LOC106759929 OS=Vigna radi... [more]
tr|A0A6A3D3E1|A0A6A3D3E1_HIBSY2.535e-15668.75Wound-responsive family protein OS=Hibiscus syriac... [more]
tr|A0A1J3G5J4|A0A1J3G5J4_NOCCA5.652e-15670.70Uncharacterized protein OS=Noccaea caerulescens OX... [more]
tr|A0A1J3K1L4|A0A1J3K1L4_NOCCA7.936e-15670.70Uncharacterized protein OS=Noccaea caerulescens OX... [more]
tr|E6NU80|E6NU80_JATCU1.193e-15571.07JMS09K11.8 protein OS=Jatropha curcas OX=180498 GN... [more]
tr|A0A5D2VU32|A0A5D2VU32_GOSMU2.384e-15569.14Uncharacterized protein OS=Gossypium mustelinum OX... [more]
tr|A0A5D2DBU8|A0A5D2DBU8_GOSDA2.630e-15569.14Uncharacterized protein OS=Gossypium darwinii OX=3... [more]
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BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9XI19|PTAC6_ARATH6.826e-14768.25PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloro... [more]
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BLAST of Vfaba.Hedin2.R1.2g122760.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G21600.26.984e-14868.25| plastid transcriptionally active 6 | Chr1:757151... [more]
AT1G21600.16.984e-14868.25| plastid transcriptionally active 6 | Chr1:757151... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044710PLASTID TRANSCRIPTIONALLY ACTIVE protein 6PANTHERPTHR35994EXPRESSED PROTEINcoord: 35..316

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g122760.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g122760.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g122760.1; organism=Vicia faba; type=mRNA; length=951bp
ATGTCTATTTCCACCACCTCCTTCTTCTTCCTCACATCCCCACCACTACC
TCCTCTCTCCACATTCACACAACCCTCCTTCTTCCCTACTTCAAAACTCA
AACCTCTCTCCCTCCAAACCACCTCCCGCCGCAACCCATTCTTAACCCGC
GCCGACGTCGTCGAAGTCGACTCCTCCGGCCCCGACGACTACGAAATAGA
CGACGAAGAAATGGATGAAGTCGACAACAAGAAGGATTTCGACATCGAGT
ACGAGAAGCTGGCTGCCGGCGACGGTGACATTGCGGCAGCGCAGAGCACG
AGCTTCGTGTCTACGCAGGGTTGGGATCCTGATACACTTGTTGATTACAG
AATCATCGAAGATGAGTTTCATAAGATTAGTTTGTTGCATTGTGATTTCT
TCATTAGGAAACCCCCTGACCCTGATAATGATGTTTATGATTTCAGAGAG
ATGTATGTTACTCCTCCAGATACAGATGTTTATTCAATCCCCAAGGTTCT
TGCACCAATGCCTCAGAAGTACATTAGATGTGCTCAAAGTGATTTTGGAT
GCGACAATGTTACAGAACCACCTGTTGATGCACGTCGAGATCCTCTTTAT
AAATATGAGAGGGAAATCGAAAAGGTATTCTTGACAAAACACTACAAAAA
TCGGAGGCTGGGAGACCCTGAGTTTGTCCTAGATTTTGAGGAGATTTATG
TTATTGATTCCAAGACTAAGTCAATAACCAGAGCCAATGTTCTGGTAACA
GCTCCAGGAGGGAGAACTAGAGATAGAAAGAGCGACTTGCTTGTCATAGC
TGATAAGGGAAACTCCTTCAAAATAATACACATGAGTGAAAAAGATGATC
CAACCACTGTCATAGAAAGACGAGAGTGGATCCAAACCAGAGAAGAAATG
GAGAGACATCTTAGAAAGTTAAGAGACTTCAGCACCTCAAATTGGTTTTG
A
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protein sequence of Vfaba.Hedin2.R1.2g122760.1_vfh_v1

>Vfaba.Hedin2.R1.2g122760.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g122760.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g122760.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=316bp
MSISTTSFFFLTSPPLPPLSTFTQPSFFPTSKLKPLSLQTTSRRNPFLTR
ADVVEVDSSGPDDYEIDDEEMDEVDNKKDFDIEYEKLAAGDGDIAAAQST
SFVSTQGWDPDTLVDYRIIEDEFHKISLLHCDFFIRKPPDPDNDVYDFRE
MYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNVTEPPVDARRDPLY
KYEREIEKVFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRANVLVT
APGGRTRDRKSDLLVIADKGNSFKIIHMSEKDDPTTVIERREWIQTREEM
ERHLRKLRDFSTSNWF
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mRNA from alignment at chr2:718433479..718437425+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g122760.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g122760.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g122760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:718433479..718437425+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044710PTAC6
Vocabulary: Cellular Component
TermDefinition
GO:0000427plastid-encoded plastid RNA polymerase complex