Vfaba.Hedin2.R1.2g123240.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|B7FH65|B7FH65_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11416343 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.395e-46 Identity = 92/117 (78.63%), Postives = 101/117 (86.32%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPNTEEETLVDE-EKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPY R K GRL+FKGGTLAT K+IDKK+KKKKNK N NPN E+ETL+DE EKE IV+G E SEYTIDA KKMKYDQLFPVEAKKFGYEPK+K S+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYARVKPGRLSFKGGTLATTSKTIDKKKKKKKNKNPNPNPNLEDETLIDEVEKEKIVDGEESSEYTIDAAKKMKYDQLFPVEAKKFGYEPKAKVTSVEDALDDRVKKKADRYCK 117
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TK40|A0A151TK40_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_023755 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.732e-44 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPNT------EEETLVDEEKEVIVEG---SELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 M+DPYER KGGRLAFKGG LA+R KSIDKK KKKKNK +++NPN +EE L+D + + VEG + SEYTIDA K+MKY+QLFPVEAKKFGY+PK+ KS+E+ALDDRVKKKADRYCK Sbjct: 1 MADPYERVKGGRLAFKGGILASRSKSIDKKGKKKKNKNKDTNPNPNPNHEGQEEILLDMDNDKQVEGEGQGQGSEYTIDAAKRMKYEQLFPVEAKKFGYQPKTNFKSVEDALDDRVKKKADRYCK 125
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JJZ8|A0A2K3JJZ8_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g047970 PE=4 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.274e-42 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPNTEEETLV---DEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYE K GRLAFKGGTLAT K+IDKK+KKKK NPN E+ETL +E +++ EGSE +EYTIDA KKMKYDQLFPVEAKKFGYEPK+K K++E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYESVKAGRLAFKGGTLATTSKTIDKKKKKKKKS---KNPNLEDETLTLNEEELEKLGGEGSESTEYTIDAAKKMKYDQLFPVEAKKFGYEPKTKVKTVEDALDDRVKKKADRYCK 116
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P6G7T7|A0A6P6G7T7_ZIZJJ (uncharacterized protein LOC107417848 OS=Ziziphus jujuba OX=326968 GN=LOC107417848 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.071e-40 Identity = 81/127 (63.78%), Postives = 92/127 (72.44%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIE-NSNPNTEEETLVD----EEKEVIVEGSELS------EYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPY R KG RL FKGG LATR K+I+KK+KKKK + N NPN + VD + +V G + S EYTIDA K+MKYD+LFPVEAKKFGYEPKSKAKS+E ALDDRVKKKADRYCK Sbjct: 1 MSDPYGRVKGDRLTFKGGVLATRSKTIEKKKKKKKKNKQHNQNPNPDHHDAVDGVEVDPSASVVVGDDDSTAGAGVEYTIDAAKRMKYDELFPVEAKKFGYEPKSKAKSVESALDDRVKKKADRYCK 127
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3DW73|A0A1S3DW73_CICAR (uncharacterized protein LOC101512829 OS=Cicer arietinum OX=3827 GN=LOC101512829 PE=4 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 6.100e-40 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPN--TEEETLVDEEKEVIVEGSELSE-YTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYER K GRLAFKGGTLATR K+IDKK+KKKK ++N N E+ETL D + E +V+ SE SE +TIDA K+MKYDQLFPVEAKKFGYEPK KS+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERVKLGRLAFKGGTLATRSKTIDKKKKKKKINNNSNNQNPNIEDETL-DGQNEKLVDESEPSELFTIDAAKRMKYDQLFPVEAKKFGYEPKKDVKSVEDALDDRVKKKADRYCK 118
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LA90|A0A4D6LA90_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g5838 PE=4 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.020e-39 Identity = 77/126 (61.11%), Postives = 90/126 (71.43%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKK----------KNKIENSNPNTEEETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYER KGGRLAFKGG LA+R KSI+KK K K +++ NPN + LV+ + EGSE YTIDA K+MKYDQLFPVEAKKFGY+PK+ S+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERVKGGRLAFKGGILASRSKSIEKKGKNKKKKRTTASAAEDEDSGHNPNPNPDELVETPTDKKAEGSE---YTIDAAKRMKYDQLFPVEAKKFGYQPKTNFNSVEDALDDRVKKKADRYCK 123
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QW88|A0A0S3QW88_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G000600 PE=4 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.714e-39 Identity = 77/126 (61.11%), Postives = 90/126 (71.43%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKK----------KNKIENSNPNTEEETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYER KGGRLAFKGG LA+R KSI+KK K K +++ NPN + VD +K+ +E SEYTIDA K+MKYDQLFPVEAKKFGY+PK S+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERVKGGRLAFKGGILASRSKSIEKKGKNKKKKRTTAAAAEDEDSGPNPNPNPDEAVDTDKQ-----AEGSEYTIDAAKRMKYDQLFPVEAKKFGYQPKINFNSVEDALDDRVKKKADRYCK 121
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UKY4|A0A0L9UKY4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g095500 PE=4 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.714e-39 Identity = 77/126 (61.11%), Postives = 90/126 (71.43%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKK----------KNKIENSNPNTEEETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYER KGGRLAFKGG LA+R KSI+KK K K +++ NPN + VD +K+ +E SEYTIDA K+MKYDQLFPVEAKKFGY+PK S+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERVKGGRLAFKGGILASRSKSIEKKGKNKKKKRTTAAAAEDEDSGPNPNPNPDEAVDTDKQ-----AEGSEYTIDAAKRMKYDQLFPVEAKKFGYQPKINFNSVEDALDDRVKKKADRYCK 121
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UH70|A0A1S3UH70_VIGRR (uncharacterized protein LOC106765308 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765308 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.928e-39 Identity = 80/123 (65.04%), Postives = 91/123 (73.98%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKI-------ENSNPNTEEETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYERAKGGRLAFKGG LA+R KSI+KK K KK + ENS PN DE + + +E SEYTIDA K+MKYDQLFPVEAKKFGY+PK+ S+E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERAKGGRLAFKGGILASRSKSIEKKGKNKKKRTTAAAAEDENSGPNPNPNPNPDEAVDTDKQ-AEGSEYTIDAAKRMKYDQLFPVEAKKFGYQPKTNFNSVEDALDDRVKKKADRYCK 122
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J7CJ46|A0A7J7CJ46_TRIWF (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW16G00524 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.381e-38 Identity = 76/116 (65.52%), Postives = 92/116 (79.31%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPNTEEETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYE+AKGGRL+FKGG LA+R K+IDKK+KKKK N + EE + +++EV +G YTIDA K+ KYD LFPVEAKKFGY+PK+K+KS+EEALDDRVKKKADRYCK Sbjct: 1 MSDPYEKAKGGRLSFKGGGLASRSKAIDKKKKKKKKA--NEDTVIEEGAELMQQQEVDGDGGTEEIYTIDAAKRRKYDDLFPVEAKKFGYDPKAKSKSVEEALDDRVKKKADRYCK 114
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. Araport11
Match: AT2G25720.1 (| hypothetical protein | Chr2:10955664-10956017 REVERSE LENGTH=117 | 201606) HSP 1 Score: 107.457 bits (267), Expect = 2.826e-31 Identity = 68/118 (57.63%), Postives = 79/118 (66.95%), Query Frame = 0 Query: 1 MSDPYERAKGGRLAFKGGTLATRQKSIDKKRKKKKNKIENSNPNTEE--ETLVDEEKEVIVEGSELSEYTIDATKKMKYDQLFPVEAKKFGYEPKSKAKSIEEALDDRVKKKADRYCK 116 MSDPYER GGRLAFKGG LATR+ KK+KK+K E + E+ +T D + Y+IDA KK KYD LFPVEAKKFGY PK+ +S E+ALDDRVKKKADRYCK Sbjct: 1 MSDPYERVNGGRLAFKGGDLATRKSIEKKKKKKQKKNKEKLD-GVEDGAKTAPDGSPPPAAAAGDEDIYSIDAAKKKKYDDLFPVEAKKFGYIPKANFESREDALDDRVKKKADRYCK 117 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.2g123240.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g123240.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g123240.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g123240.1; organism=Vicia faba; type=mRNA; length=351bpback to top protein sequence of Vfaba.Hedin2.R1.2g123240.1_vfh_v1 >Vfaba.Hedin2.R1.2g123240.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g123240.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g123240.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=116bpback to top mRNA from alignment at chr2:720768465..720768815+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g123240.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g123240.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g123240.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:720768465..720768815+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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